RNA–Protein interactions for RNA: ENST00000267202.6

VPS37B-201, Transcript of VPS37B, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS37B, Length 3,028 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-201ENST00000267202 NISCHQ9Y2I1 1504 aa37.13■■■■□ 3.53
VPS37B-201ENST00000267202 SHROOM4Q9ULL8 1493 aa32.57■■■□□ 2.8
VPS37B-201ENST00000267202 SUPT5HO00267 1087 aaKnown RBP32■■■□□ 2.71
VPS37B-201ENST00000267202 DCAF8L2P0C7V8 631 aa31.71■■■□□ 2.67
VPS37B-201ENST00000267202 ZCCHC6Q5VYS8 1495 aaKnown RBP31.36■■■□□ 2.61
VPS37B-201ENST00000267202 CCDC180Q9P1Z9 1646 aa31.16■■■□□ 2.58
VPS37B-201ENST00000267202 CHIC1Q5VXU3 224 aa30.82■■■□□ 2.52
VPS37B-201ENST00000267202 MYO15BQ96JP2 1530 aa30.76■■■□□ 2.51
VPS37B-201ENST00000267202 PCGF6Q9BYE7 350 aa30.3■■■□□ 2.44
VPS37B-201ENST00000267202 LOC105371045A0A1W2PR82 267 aa30.24■■■□□ 2.43
VPS37B-201ENST00000267202 DCAF1Q9Y4B6 1507 aa30.07■■■□□ 2.4
VPS37B-201ENST00000267202 HRCP23327 699 aa30.06■■■□□ 2.4
VPS37B-201ENST00000267202 PPARGC1BQ86YN6 1023 aaKnown RBP29.88■■■□□ 2.37
VPS37B-201ENST00000267202 SCRIBQ14160 1630 aa29.84■■■□□ 2.37
VPS37B-201ENST00000267202 EHMT2Q96KQ7 1210 aa29.77■■■□□ 2.36
VPS37B-201ENST00000267202 FAM9AQ8IZU1 332 aaPredicted RBP29.7■■■□□ 2.35
VPS37B-201ENST00000267202 ABCC9O60706 1549 aa29.6■■■□□ 2.33
VPS37B-201ENST00000267202 RSF1Q96T23 1441 aaPredicted RBP29.59■■■□□ 2.33
VPS37B-201ENST00000267202 TRIM41Q8WV44 630 aa29.54■■■□□ 2.32
VPS37B-201ENST00000267202 RB1CC1Q8TDY2 1594 aa29.36■■■□□ 2.29
VPS37B-201ENST00000267202 TRIM26Q12899 539 aaPredicted RBP29.33■■■□□ 2.29
VPS37B-201ENST00000267202 CECR2Q9BXF3 1484 aa29.26■■■□□ 2.27
VPS37B-201ENST00000267202 MROH2BQ7Z745 1585 aa29.06■■■□□ 2.24
VPS37B-201ENST00000267202 WIZO95785 1651 aa28.93■■■□□ 2.22
VPS37B-201ENST00000267202 NACADO15069 1562 aa28.92■■■□□ 2.22
VPS37B-201ENST00000267202 TTBK1Q5TCY1 1321 aaPredicted RBP28.77■■■□□ 2.2
VPS37B-201ENST00000267202 ZEB1P37275 1124 aaPredicted RBP28.55■■■□□ 2.16
VPS37B-201ENST00000267202 PABPN1Q86U42 306 aaKnown RBP eCLIP28.51■■■□□ 2.15
VPS37B-201ENST00000267202 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.51■■■□□ 2.15
VPS37B-201ENST00000267202 ABCC8Q09428 1581 aa28.48■■■□□ 2.15
VPS37B-201ENST00000267202 BAZ1AQ9NRL2 1556 aaPredicted RBP28.48■■■□□ 2.15
VPS37B-201ENST00000267202 CCDC88BA6NC98 1476 aa28.36■■■□□ 2.13
VPS37B-201ENST00000267202 CCER1Q8TC90 406 aaPredicted RBP28.33■■■□□ 2.13
VPS37B-201ENST00000267202 SCAF1Q9H7N4 1312 aaKnown RBP28.31■■■□□ 2.12
VPS37B-201ENST00000267202 SOGA1O94964 1423 aa28.26■■■□□ 2.11
VPS37B-201ENST00000267202 EIF4G1Q04637 1599 aaKnown RBP28.26■■■□□ 2.11
VPS37B-201ENST00000267202 SMARCA4P51532 1647 aa28.24■■■□□ 2.11
VPS37B-201ENST00000267202 UBTFP17480 764 aaKnown RBP28.24■■■□□ 2.11
VPS37B-201ENST00000267202 TOP2AP11388 1531 aaKnown RBP28.23■■■□□ 2.11
VPS37B-201ENST00000267202 SMARCA2P51531 1590 aa28.17■■■□□ 2.1
VPS37B-201ENST00000267202 UNC13AQ9UPW8 1703 aa28.16■■■□□ 2.1
VPS37B-201ENST00000267202 RUSC2Q8N2Y8 1516 aa28.15■■■□□ 2.1
VPS37B-201ENST00000267202 PELP1Q8IZL8 1130 aaKnown RBP28.1■■■□□ 2.09
VPS37B-201ENST00000267202 CEP162Q5TB80 1403 aa28.08■■■□□ 2.09
VPS37B-201ENST00000267202 RANGAP1P46060 587 aaPredicted RBP28.07■■■□□ 2.08
VPS37B-201ENST00000267202 CSRNP3Q8WYN3 585 aa28.06■■■□□ 2.08
VPS37B-201ENST00000267202 TNIKQ9UKE5 1360 aa27.86■■■□□ 2.05
VPS37B-201ENST00000267202 BICRAQ9NZM4 1560 aa27.82■■■□□ 2.04
VPS37B-201ENST00000267202 WRNQ14191 1432 aaPredicted RBP eCLIP27.82■■■□□ 2.04
VPS37B-201ENST00000267202 HNRNPUL2Q1KMD3 747 aaKnown RBP27.81■■■□□ 2.04
VPS37B-201ENST00000267202 DIEXFQ68CQ4 756 aaKnown RBP27.75■■■□□ 2.03
VPS37B-201ENST00000267202 GOLGA3Q08378 1498 aa27.7■■■□□ 2.02
VPS37B-201ENST00000267202 NEUROD1Q13562 356 aa27.68■■■□□ 2.02
VPS37B-201ENST00000267202 EEA1Q15075 1411 aa27.65■■■□□ 2.02
VPS37B-201ENST00000267202 SYNJ1O43426 1573 aa27.65■■■□□ 2.02
VPS37B-201ENST00000267202 BAZ1BQ9UIG0 1483 aaKnown RBP27.57■■■□□ 2
VPS37B-201ENST00000267202 ATAD2BQ9ULI0 1458 aa27.57■■■□□ 2
VPS37B-201ENST00000267202 ACIN1Q9UKV3 1341 aaKnown RBP27.56■■■□□ 2
VPS37B-201ENST00000267202 CLIP1P30622 1438 aa27.54■■■□□ 2
VPS37B-201ENST00000267202 GTF3C3Q9Y5Q9 886 aa27.53■■■□□ 2
VPS37B-201ENST00000267202 APLP2Q06481 763 aa27.53■■■□□ 2
VPS37B-201ENST00000267202 CEP164Q9UPV0 1460 aa27.49■■□□□ 1.99
VPS37B-201ENST00000267202 RAPGEF2Q9Y4G8 1499 aa27.48■■□□□ 1.99
VPS37B-201ENST00000267202 YTHDC1Q96MU7 727 aaKnown RBP27.48■■□□□ 1.99
VPS37B-201ENST00000267202 MYT1Q01538 1121 aa27.46■■□□□ 1.99
VPS37B-201ENST00000267202 PEG3Q9GZU2 1588 aa27.42■■□□□ 1.98
VPS37B-201ENST00000267202 ZNF316A6NFI3 1004 aaPredicted RBP27.4■■□□□ 1.98
VPS37B-201ENST00000267202 VPS8Q8N3P4 1428 aa27.3■■□□□ 1.96
VPS37B-201ENST00000267202 CENPBP07199 599 aaPredicted RBP27.3■■□□□ 1.96
VPS37B-201ENST00000267202 KIF21BO75037 1637 aa27.3■■□□□ 1.96
VPS37B-201ENST00000267202 MIER1Q8N108 512 aa27.21■■□□□ 1.95
VPS37B-201ENST00000267202 KANK4Q5T7N3 995 aaPredicted RBP27.18■■□□□ 1.94
VPS37B-201ENST00000267202 ITGAEP38570 1179 aa27.16■■□□□ 1.94
VPS37B-201ENST00000267202 TOP2BQ02880 1626 aa27.11■■□□□ 1.93
VPS37B-201ENST00000267202 CUX1P39880 1505 aa26.99■■□□□ 1.91
VPS37B-201ENST00000267202 ARAP1Q96P48 1450 aa26.98■■□□□ 1.91
VPS37B-201ENST00000267202 PRXQ9BXM0 1461 aa26.95■■□□□ 1.9
VPS37B-201ENST00000267202 BIVM-ERCC5R4GMW8 1640 aa26.92■■□□□ 1.9
VPS37B-201ENST00000267202 KIF27Q86VH2 1401 aa26.9■■□□□ 1.9
VPS37B-201ENST00000267202 ATP1B4Q9UN42 357 aaPredicted RBP26.88■■□□□ 1.89
VPS37B-201ENST00000267202 P3H3Q8IVL6 736 aa26.87■■□□□ 1.89
VPS37B-201ENST00000267202 NCAPD3P42695 1498 aa26.86■■□□□ 1.89
VPS37B-201ENST00000267202 DHX57Q6P158 1386 aaKnown RBP26.85■■□□□ 1.89
VPS37B-201ENST00000267202 ERICH3Q5RHP9 1530 aa26.81■■□□□ 1.88
VPS37B-201ENST00000267202 CUX2O14529 1486 aa26.76■■□□□ 1.87
VPS37B-201ENST00000267202 HMGXB3Q12766 1538 aa26.75■■□□□ 1.87
VPS37B-201ENST00000267202 CFTRP13569 1480 aa26.75■■□□□ 1.87
VPS37B-201ENST00000267202 ARHGAP35Q9NRY4 1499 aa26.75■■□□□ 1.87
VPS37B-201ENST00000267202 CCNB3Q8WWL7 1395 aa26.68■■□□□ 1.86
VPS37B-201ENST00000267202 FAM50AQ14320 339 aaKnown RBP26.66■■□□□ 1.86
VPS37B-201ENST00000267202 IGF1RP08069 1367 aa26.66■■□□□ 1.86
VPS37B-201ENST00000267202 CARMIL1Q5VZK9 1371 aa26.6■■□□□ 1.85
VPS37B-201ENST00000267202 RRBP1Q9P2E9 1410 aaKnown RBP26.59■■□□□ 1.85
VPS37B-201ENST00000267202 FGD5Q6ZNL6 1462 aa26.55■■□□□ 1.84
VPS37B-201ENST00000267202 RAB3GAP2Q9H2M9 1393 aa26.54■■□□□ 1.84
VPS37B-201ENST00000267202 CADPSQ9ULU8 1353 aa26.54■■□□□ 1.84
VPS37B-201ENST00000267202 CLSPNQ9HAW4 1339 aa26.53■■□□□ 1.84
VPS37B-201ENST00000267202 SIN3AQ96ST3 1273 aa26.52■■□□□ 1.84
VPS37B-201ENST00000267202 KCNH8Q96L42 1107 aa26.49■■□□□ 1.83
VPS37B-201ENST00000267202 HIRIP3Q9BW71 556 aaPredicted RBP26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms