RNA–Protein interactions for RNA: ENST00000329314.5

TRIM61-201, Transcript of tripartite motif containing 61, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM61, Length 1,582 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM61-201ENST00000329314 NISCHQ9Y2I1 1504 aa42.49■■■■■ 4.39
TRIM61-201ENST00000329314 CCDC180Q9P1Z9 1646 aa37.11■■■■□ 3.53
TRIM61-201ENST00000329314 ZCCHC6Q5VYS8 1495 aaKnown RBP35.69■■■■□ 3.3
TRIM61-201ENST00000329314 DCAF1Q9Y4B6 1507 aa35.18■■■■□ 3.22
TRIM61-201ENST00000329314 ABCC9O60706 1549 aa35.09■■■■□ 3.21
TRIM61-201ENST00000329314 DCAF8L2P0C7V8 631 aa35.01■■■■□ 3.2
TRIM61-201ENST00000329314 MYO15BQ96JP2 1530 aa34.81■■■■□ 3.16
TRIM61-201ENST00000329314 NACADO15069 1562 aa34.58■■■■□ 3.13
TRIM61-201ENST00000329314 SHROOM4Q9ULL8 1493 aa34.51■■■■□ 3.11
TRIM61-201ENST00000329314 RB1CC1Q8TDY2 1594 aa34.29■■■■□ 3.08
TRIM61-201ENST00000329314 SCRIBQ14160 1630 aa34.04■■■■□ 3.04
TRIM61-201ENST00000329314 UNC13AQ9UPW8 1703 aa33.57■■■□□ 2.97
TRIM61-201ENST00000329314 BICRAQ9NZM4 1560 aa33.25■■■□□ 2.91
TRIM61-201ENST00000329314 SUPT5HO00267 1087 aaKnown RBP33.17■■■□□ 2.9
TRIM61-201ENST00000329314 PABPN1Q86U42 306 aaKnown RBP eCLIP33.06■■■□□ 2.88
TRIM61-201ENST00000329314 CECR2Q9BXF3 1484 aa32.99■■■□□ 2.87
TRIM61-201ENST00000329314 RSF1Q96T23 1441 aaPredicted RBP32.92■■■□□ 2.86
TRIM61-201ENST00000329314 BAZ1AQ9NRL2 1556 aaPredicted RBP32.82■■■□□ 2.84
TRIM61-201ENST00000329314 MROH2BQ7Z745 1585 aa32.81■■■□□ 2.84
TRIM61-201ENST00000329314 SMARCA4P51532 1647 aa32.67■■■□□ 2.82
TRIM61-201ENST00000329314 WIZO95785 1651 aa32.52■■■□□ 2.8
TRIM61-201ENST00000329314 PEG3Q9GZU2 1588 aa32.31■■■□□ 2.76
TRIM61-201ENST00000329314 EIF4G1Q04637 1599 aaKnown RBP32.25■■■□□ 2.75
TRIM61-201ENST00000329314 TOP2AP11388 1531 aaKnown RBP32.22■■■□□ 2.75
TRIM61-201ENST00000329314 ATAD2BQ9ULI0 1458 aa32.16■■■□□ 2.74
TRIM61-201ENST00000329314 SMARCA2P51531 1590 aa32.15■■■□□ 2.74
TRIM61-201ENST00000329314 BAZ1BQ9UIG0 1483 aaKnown RBP31.96■■■□□ 2.71
TRIM61-201ENST00000329314 NCAPD3P42695 1498 aa31.92■■■□□ 2.7
TRIM61-201ENST00000329314 CCDC88BA6NC98 1476 aa31.87■■■□□ 2.69
TRIM61-201ENST00000329314 HMGXB3Q12766 1538 aa31.86■■■□□ 2.69
TRIM61-201ENST00000329314 CC2D2AQ9P2K1 1620 aa31.78■■■□□ 2.68
TRIM61-201ENST00000329314 CHIC1Q5VXU3 224 aa31.76■■■□□ 2.67
TRIM61-201ENST00000329314 TRIM41Q8WV44 630 aa31.23■■■□□ 2.59
TRIM61-201ENST00000329314 CFTRP13569 1480 aa31.18■■■□□ 2.58
TRIM61-201ENST00000329314 ABCC8Q09428 1581 aa31.14■■■□□ 2.58
TRIM61-201ENST00000329314 CADPSQ9ULU8 1353 aa31.08■■■□□ 2.57
TRIM61-201ENST00000329314 DNAJC5BQ9UF47 199 aa31.01■■■□□ 2.56
TRIM61-201ENST00000329314 PRDM2Q13029 1718 aa31.01■■■□□ 2.56
TRIM61-201ENST00000329314 WRNQ14191 1432 aaPredicted RBP eCLIP30.98■■■□□ 2.55
TRIM61-201ENST00000329314 SYNJ1O43426 1573 aa30.85■■■□□ 2.53
TRIM61-201ENST00000329314 LAMC3Q9Y6N6 1575 aa30.84■■■□□ 2.53
TRIM61-201ENST00000329314 NESP48681 1621 aa30.79■■■□□ 2.52
TRIM61-201ENST00000329314 TOP2BQ02880 1626 aa30.76■■■□□ 2.51
TRIM61-201ENST00000329314 BIVM-ERCC5R4GMW8 1640 aa30.74■■■□□ 2.51
TRIM61-201ENST00000329314 FANCD2Q9BXW9 1451 aa30.72■■■□□ 2.51
TRIM61-201ENST00000329314 CUX1P39880 1505 aa30.69■■■□□ 2.5
TRIM61-201ENST00000329314 FAM9AQ8IZU1 332 aaPredicted RBP30.6■■■□□ 2.49
TRIM61-201ENST00000329314 PDS5BQ9NTI5 1447 aa30.59■■■□□ 2.49
TRIM61-201ENST00000329314 SOGA1O94964 1423 aa30.55■■■□□ 2.48
TRIM61-201ENST00000329314 CEP164Q9UPV0 1460 aa30.54■■■□□ 2.48
TRIM61-201ENST00000329314 EEA1Q15075 1411 aa30.54■■■□□ 2.48
TRIM61-201ENST00000329314 LOC105371045A0A1W2PR82 267 aa30.5■■■□□ 2.47
TRIM61-201ENST00000329314 DNMBPQ6XZF7 1577 aa30.45■■■□□ 2.46
TRIM61-201ENST00000329314 RUSC2Q8N2Y8 1516 aa30.44■■■□□ 2.46
TRIM61-201ENST00000329314 KIF21AQ7Z4S6 1674 aa30.42■■■□□ 2.46
TRIM61-201ENST00000329314 TOPBP1Q92547 1522 aa30.38■■■□□ 2.45
TRIM61-201ENST00000329314 FGD5Q6ZNL6 1462 aa30.36■■■□□ 2.45
TRIM61-201ENST00000329314 URB2Q14146 1524 aaKnown RBP30.34■■■□□ 2.45
TRIM61-201ENST00000329314 CSRNP3Q8WYN3 585 aa30.34■■■□□ 2.45
TRIM61-201ENST00000329314 POLA1P09884 1462 aaPredicted RBP30.23■■■□□ 2.43
TRIM61-201ENST00000329314 KIF27Q86VH2 1401 aa30.22■■■□□ 2.43
TRIM61-201ENST00000329314 MRC2Q9UBG0 1479 aa30.2■■■□□ 2.43
TRIM61-201ENST00000329314 CUX2O14529 1486 aa30.13■■■□□ 2.41
TRIM61-201ENST00000329314 KIF21BO75037 1637 aa30.13■■■□□ 2.41
TRIM61-201ENST00000329314 EHMT2Q96KQ7 1210 aa30.12■■■□□ 2.41
TRIM61-201ENST00000329314 ABCA10Q8WWZ4 1543 aa30.11■■■□□ 2.41
TRIM61-201ENST00000329314 RAD54L2Q9Y4B4 1467 aa30.1■■■□□ 2.41
TRIM61-201ENST00000329314 ERCC6Q03468 1493 aa30.1■■■□□ 2.41
TRIM61-201ENST00000329314 GOLGA3Q08378 1498 aa30.08■■■□□ 2.41
TRIM61-201ENST00000329314 WDR62O43379 1518 aa30.06■■■□□ 2.4
TRIM61-201ENST00000329314 WDR97A6NE52 1622 aa30.02■■■□□ 2.4
TRIM61-201ENST00000329314 PRXQ9BXM0 1461 aa30.01■■■□□ 2.39
TRIM61-201ENST00000329314 TNIKQ9UKE5 1360 aa29.98■■■□□ 2.39
TRIM61-201ENST00000329314 THOC2Q8NI27 1593 aaKnown RBP29.97■■■□□ 2.39
TRIM61-201ENST00000329314 IGF1RP08069 1367 aa29.96■■■□□ 2.39
TRIM61-201ENST00000329314 ERICH3Q5RHP9 1530 aa29.95■■■□□ 2.38
TRIM61-201ENST00000329314 TARBP1Q13395 1621 aaKnown RBP29.94■■■□□ 2.38
TRIM61-201ENST00000329314 RAPGEF2Q9Y4G8 1499 aa29.94■■■□□ 2.38
TRIM61-201ENST00000329314 UBTFP17480 764 aaKnown RBP29.9■■■□□ 2.38
TRIM61-201ENST00000329314 ABCA5Q8WWZ7 1642 aa29.87■■■□□ 2.37
TRIM61-201ENST00000329314 IFT140Q96RY7 1462 aa29.82■■■□□ 2.36
TRIM61-201ENST00000329314 TDRD9Q8NDG6 1382 aaKnown RBP29.81■■■□□ 2.36
TRIM61-201ENST00000329314 CARMIL1Q5VZK9 1371 aa29.8■■■□□ 2.36
TRIM61-201ENST00000329314 GAPVD1Q14C86 1478 aa29.8■■■□□ 2.36
TRIM61-201ENST00000329314 CEP162Q5TB80 1403 aa29.78■■■□□ 2.36
TRIM61-201ENST00000329314 CUL7Q14999 1698 aa29.74■■■□□ 2.35
TRIM61-201ENST00000329314 AQRO60306 1485 aaKnown RBP eCLIP29.65■■■□□ 2.34
TRIM61-201ENST00000329314 PBRM1Q86U86 1689 aa29.63■■■□□ 2.33
TRIM61-201ENST00000329314 ZNF608Q9ULD9 1512 aaPredicted RBP29.63■■■□□ 2.33
TRIM61-201ENST00000329314 GRIN2BQ13224 1484 aa29.59■■■□□ 2.33
TRIM61-201ENST00000329314 CLIP1P30622 1438 aa29.57■■■□□ 2.32
TRIM61-201ENST00000329314 EIF4G3O43432 1585 aaKnown RBP29.54■■■□□ 2.32
TRIM61-201ENST00000329314 FHAD1B1AJZ9 1412 aa29.49■■■□□ 2.31
TRIM61-201ENST00000329314 ADAMTS12P58397 1594 aa29.48■■■□□ 2.31
TRIM61-201ENST00000329314 CTTNBP2Q8WZ74 1663 aa29.39■■■□□ 2.29
TRIM61-201ENST00000329314 SNAPC4Q5SXM2 1469 aa29.38■■■□□ 2.29
TRIM61-201ENST00000329314 RANGAP1P46060 587 aaPredicted RBP29.38■■■□□ 2.29
TRIM61-201ENST00000329314 MAGI1Q96QZ7 1491 aaPredicted RBP29.35■■■□□ 2.29
TRIM61-201ENST00000329314 VPS8Q8N3P4 1428 aa29.32■■■□□ 2.28
TRIM61-201ENST00000329314 ARHGAP35Q9NRY4 1499 aa29.32■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms