RNA–Protein interactions for RNA: ENST00000429163.6

PDE6B-202, Transcript of phosphodiesterase 6B, humanhuman

TSL 2 BASIC

Gene PDE6B, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-202ENST00000429163 NISCHQ9Y2I1 1504 aa39.4■■■■□ 3.9
PDE6B-202ENST00000429163 CCDC180Q9P1Z9 1646 aa33.89■■■■□ 3.02
PDE6B-202ENST00000429163 ZCCHC6Q5VYS8 1495 aaKnown RBP33.34■■■□□ 2.93
PDE6B-202ENST00000429163 SHROOM4Q9ULL8 1493 aa32.72■■■□□ 2.83
PDE6B-202ENST00000429163 DCAF1Q9Y4B6 1507 aa32.69■■■□□ 2.82
PDE6B-202ENST00000429163 SUPT5HO00267 1087 aaKnown RBP32.07■■■□□ 2.72
PDE6B-202ENST00000429163 DCAF8L2P0C7V8 631 aa32■■■□□ 2.71
PDE6B-202ENST00000429163 MYO15BQ96JP2 1530 aa31.92■■■□□ 2.7
PDE6B-202ENST00000429163 ABCC9O60706 1549 aa31.4■■■□□ 2.62
PDE6B-202ENST00000429163 CHIC1Q5VXU3 224 aa31.37■■■□□ 2.61
PDE6B-202ENST00000429163 NACADO15069 1562 aa31.31■■■□□ 2.6
PDE6B-202ENST00000429163 SCRIBQ14160 1630 aa31.18■■■□□ 2.58
PDE6B-202ENST00000429163 RSF1Q96T23 1441 aaPredicted RBP30.98■■■□□ 2.55
PDE6B-202ENST00000429163 RB1CC1Q8TDY2 1594 aa30.77■■■□□ 2.52
PDE6B-202ENST00000429163 CECR2Q9BXF3 1484 aa30.45■■■□□ 2.47
PDE6B-202ENST00000429163 MROH2BQ7Z745 1585 aa30.43■■■□□ 2.46
PDE6B-202ENST00000429163 BAZ1AQ9NRL2 1556 aaPredicted RBP30.36■■■□□ 2.45
PDE6B-202ENST00000429163 WIZO95785 1651 aa30.22■■■□□ 2.43
PDE6B-202ENST00000429163 TRIM41Q8WV44 630 aa30.16■■■□□ 2.42
PDE6B-202ENST00000429163 LOC105371045A0A1W2PR82 267 aa30.12■■■□□ 2.41
PDE6B-202ENST00000429163 UNC13AQ9UPW8 1703 aa30.1■■■□□ 2.41
PDE6B-202ENST00000429163 HRCP23327 699 aa30.08■■■□□ 2.41
PDE6B-202ENST00000429163 SMARCA4P51532 1647 aa30.04■■■□□ 2.4
PDE6B-202ENST00000429163 TOP2AP11388 1531 aaKnown RBP30.01■■■□□ 2.39
PDE6B-202ENST00000429163 EIF4G1Q04637 1599 aaKnown RBP29.96■■■□□ 2.39
PDE6B-202ENST00000429163 PCGF6Q9BYE7 350 aa29.93■■■□□ 2.38
PDE6B-202ENST00000429163 TRIM26Q12899 539 aaPredicted RBP29.79■■■□□ 2.36
PDE6B-202ENST00000429163 BICRAQ9NZM4 1560 aa29.76■■■□□ 2.36
PDE6B-202ENST00000429163 SMARCA2P51531 1590 aa29.74■■■□□ 2.35
PDE6B-202ENST00000429163 PEG3Q9GZU2 1588 aa29.71■■■□□ 2.35
PDE6B-202ENST00000429163 CCDC88BA6NC98 1476 aa29.69■■■□□ 2.34
PDE6B-202ENST00000429163 FAM9AQ8IZU1 332 aaPredicted RBP29.51■■■□□ 2.31
PDE6B-202ENST00000429163 EEA1Q15075 1411 aa29.4■■■□□ 2.3
PDE6B-202ENST00000429163 ABCC8Q09428 1581 aa29.35■■■□□ 2.29
PDE6B-202ENST00000429163 PABPN1Q86U42 306 aaKnown RBP eCLIP29.33■■■□□ 2.29
PDE6B-202ENST00000429163 ATAD2BQ9ULI0 1458 aa29.28■■■□□ 2.28
PDE6B-202ENST00000429163 ZEB1P37275 1124 aaPredicted RBP29.27■■■□□ 2.28
PDE6B-202ENST00000429163 BAZ1BQ9UIG0 1483 aaKnown RBP29.16■■■□□ 2.26
PDE6B-202ENST00000429163 WRNQ14191 1432 aaPredicted RBP eCLIP29.14■■■□□ 2.26
PDE6B-202ENST00000429163 TNIKQ9UKE5 1360 aa29.11■■■□□ 2.25
PDE6B-202ENST00000429163 SOGA1O94964 1423 aa29.05■■■□□ 2.24
PDE6B-202ENST00000429163 CSRNP3Q8WYN3 585 aa29.02■■■□□ 2.24
PDE6B-202ENST00000429163 PPARGC1BQ86YN6 1023 aaKnown RBP29■■■□□ 2.23
PDE6B-202ENST00000429163 CEP162Q5TB80 1403 aa28.96■■■□□ 2.23
PDE6B-202ENST00000429163 GOLGA3Q08378 1498 aa28.96■■■□□ 2.23
PDE6B-202ENST00000429163 HMGXB3Q12766 1538 aa28.95■■■□□ 2.22
PDE6B-202ENST00000429163 EHMT2Q96KQ7 1210 aa28.94■■■□□ 2.22
PDE6B-202ENST00000429163 SYNJ1O43426 1573 aa28.91■■■□□ 2.22
PDE6B-202ENST00000429163 NCAPD3P42695 1498 aa28.89■■■□□ 2.22
PDE6B-202ENST00000429163 KIF21BO75037 1637 aa28.89■■■□□ 2.22
PDE6B-202ENST00000429163 CEP164Q9UPV0 1460 aa28.86■■■□□ 2.21
PDE6B-202ENST00000429163 RUSC2Q8N2Y8 1516 aa28.84■■■□□ 2.21
PDE6B-202ENST00000429163 TOP2BQ02880 1626 aa28.78■■■□□ 2.2
PDE6B-202ENST00000429163 BIVM-ERCC5R4GMW8 1640 aa28.74■■■□□ 2.19
PDE6B-202ENST00000429163 UBTFP17480 764 aaKnown RBP28.69■■■□□ 2.18
PDE6B-202ENST00000429163 CFTRP13569 1480 aa28.54■■■□□ 2.16
PDE6B-202ENST00000429163 ERICH3Q5RHP9 1530 aa28.52■■■□□ 2.16
PDE6B-202ENST00000429163 CLIP1P30622 1438 aa28.5■■■□□ 2.15
PDE6B-202ENST00000429163 PRDM2Q13029 1718 aa28.45■■■□□ 2.15
PDE6B-202ENST00000429163 VPS8Q8N3P4 1428 aa28.44■■■□□ 2.14
PDE6B-202ENST00000429163 RAPGEF2Q9Y4G8 1499 aa28.44■■■□□ 2.14
PDE6B-202ENST00000429163 PRXQ9BXM0 1461 aa28.42■■■□□ 2.14
PDE6B-202ENST00000429163 CUX1P39880 1505 aa28.39■■■□□ 2.13
PDE6B-202ENST00000429163 CCER1Q8TC90 406 aaPredicted RBP28.35■■■□□ 2.13
PDE6B-202ENST00000429163 KIF27Q86VH2 1401 aa28.32■■■□□ 2.12
PDE6B-202ENST00000429163 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.27■■■□□ 2.12
PDE6B-202ENST00000429163 CADPSQ9ULU8 1353 aa28.2■■■□□ 2.11
PDE6B-202ENST00000429163 APLP2Q06481 763 aa28.16■■■□□ 2.1
PDE6B-202ENST00000429163 CC2D2AQ9P2K1 1620 aa28.1■■■□□ 2.09
PDE6B-202ENST00000429163 ARAP1Q96P48 1450 aa28.06■■■□□ 2.08
PDE6B-202ENST00000429163 DNAJC5BQ9UF47 199 aa28.04■■■□□ 2.08
PDE6B-202ENST00000429163 TTBK1Q5TCY1 1321 aaPredicted RBP28.03■■■□□ 2.08
PDE6B-202ENST00000429163 IGF1RP08069 1367 aa27.93■■■□□ 2.06
PDE6B-202ENST00000429163 CUX2O14529 1486 aa27.93■■■□□ 2.06
PDE6B-202ENST00000429163 FGD5Q6ZNL6 1462 aa27.91■■■□□ 2.06
PDE6B-202ENST00000429163 ARHGAP35Q9NRY4 1499 aa27.87■■■□□ 2.05
PDE6B-202ENST00000429163 FANCD2Q9BXW9 1451 aa27.86■■■□□ 2.05
PDE6B-202ENST00000429163 MAP3K1Q13233 1512 aa27.86■■■□□ 2.05
PDE6B-202ENST00000429163 DNMBPQ6XZF7 1577 aa27.84■■■□□ 2.05
PDE6B-202ENST00000429163 CLSPNQ9HAW4 1339 aa27.83■■■□□ 2.05
PDE6B-202ENST00000429163 RRBP1Q9P2E9 1410 aaKnown RBP27.81■■■□□ 2.04
PDE6B-202ENST00000429163 CARMIL1Q5VZK9 1371 aa27.81■■■□□ 2.04
PDE6B-202ENST00000429163 HNRNPUL2Q1KMD3 747 aaKnown RBP27.77■■■□□ 2.04
PDE6B-202ENST00000429163 ABCA10Q8WWZ4 1543 aa27.76■■■□□ 2.03
PDE6B-202ENST00000429163 RANGAP1P46060 587 aaPredicted RBP27.73■■■□□ 2.03
PDE6B-202ENST00000429163 LAMC3Q9Y6N6 1575 aa27.72■■■□□ 2.03
PDE6B-202ENST00000429163 DIEXFQ68CQ4 756 aaKnown RBP27.71■■■□□ 2.03
PDE6B-202ENST00000429163 ZNF316A6NFI3 1004 aaPredicted RBP27.69■■■□□ 2.02
PDE6B-202ENST00000429163 TOPBP1Q92547 1522 aa27.69■■■□□ 2.02
PDE6B-202ENST00000429163 CUL7Q14999 1698 aa27.66■■■□□ 2.02
PDE6B-202ENST00000429163 FHAD1B1AJZ9 1412 aa27.65■■■□□ 2.02
PDE6B-202ENST00000429163 KANK4Q5T7N3 995 aaPredicted RBP27.64■■■□□ 2.02
PDE6B-202ENST00000429163 POLA1P09884 1462 aaPredicted RBP27.63■■■□□ 2.01
PDE6B-202ENST00000429163 TIAM1Q13009 1591 aa27.62■■■□□ 2.01
PDE6B-202ENST00000429163 EFCAB5A4FU69 1503 aa27.59■■■□□ 2.01
PDE6B-202ENST00000429163 CCNB3Q8WWL7 1395 aa27.58■■■□□ 2.01
PDE6B-202ENST00000429163 WDR97A6NE52 1622 aa27.53■■■□□ 2
PDE6B-202ENST00000429163 DHX57Q6P158 1386 aaKnown RBP27.52■■■□□ 2
PDE6B-202ENST00000429163 AQRO60306 1485 aaKnown RBP eCLIP27.51■■□□□ 1.99
PDE6B-202ENST00000429163 CFAP43Q8NDM7 1665 aa27.5■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms