RNA–Protein interactions for RNA: ENST00000449496.2

KRT18P38-201, Transcript of keratin 18 pseudogene 38, humanhuman

BASIC

Gene KRT18P38, Length 1,282 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18P38-201ENST00000449496 NISCHQ9Y2I1 1504 aa45.82■■■■■ 4.92
KRT18P38-201ENST00000449496 CCDC180Q9P1Z9 1646 aa40.82■■■■■ 4.13
KRT18P38-201ENST00000449496 ABCC9O60706 1549 aa40.37■■■■■ 4.05
KRT18P38-201ENST00000449496 RB1CC1Q8TDY2 1594 aa38.57■■■■□ 3.77
KRT18P38-201ENST00000449496 NACADO15069 1562 aa38.44■■■■□ 3.74
KRT18P38-201ENST00000449496 DCAF8L2P0C7V8 631 aa38.38■■■■□ 3.73
KRT18P38-201ENST00000449496 ZCCHC6Q5VYS8 1495 aaKnown RBP38.11■■■■□ 3.69
KRT18P38-201ENST00000449496 MYO15BQ96JP2 1530 aa38.07■■■■□ 3.69
KRT18P38-201ENST00000449496 UNC13AQ9UPW8 1703 aa37.82■■■■□ 3.65
KRT18P38-201ENST00000449496 DCAF1Q9Y4B6 1507 aa37.82■■■■□ 3.64
KRT18P38-201ENST00000449496 PABPN1Q86U42 306 aaKnown RBP eCLIP37.68■■■■□ 3.62
KRT18P38-201ENST00000449496 BICRAQ9NZM4 1560 aa37.56■■■■□ 3.6
KRT18P38-201ENST00000449496 DNAJC5BQ9UF47 199 aa37.44■■■■□ 3.58
KRT18P38-201ENST00000449496 SCRIBQ14160 1630 aa37.32■■■■□ 3.57
KRT18P38-201ENST00000449496 SHROOM4Q9ULL8 1493 aa36.92■■■■□ 3.5
KRT18P38-201ENST00000449496 EIF4G1Q04637 1599 aaKnown RBP36.53■■■■□ 3.44
KRT18P38-201ENST00000449496 CC2D2AQ9P2K1 1620 aa36.48■■■■□ 3.43
KRT18P38-201ENST00000449496 CECR2Q9BXF3 1484 aa36.25■■■■□ 3.39
KRT18P38-201ENST00000449496 SMARCA4P51532 1647 aa35.64■■■■□ 3.3
KRT18P38-201ENST00000449496 ATAD2BQ9ULI0 1458 aa35.52■■■■□ 3.28
KRT18P38-201ENST00000449496 NCAPD3P42695 1498 aa35.51■■■■□ 3.28
KRT18P38-201ENST00000449496 BAZ1AQ9NRL2 1556 aaPredicted RBP35.47■■■■□ 3.27
KRT18P38-201ENST00000449496 SMARCA2P51531 1590 aa35.38■■■■□ 3.25
KRT18P38-201ENST00000449496 MROH2BQ7Z745 1585 aa35.37■■■■□ 3.25
KRT18P38-201ENST00000449496 HMGXB3Q12766 1538 aa35.3■■■■□ 3.24
KRT18P38-201ENST00000449496 PEG3Q9GZU2 1588 aa35.25■■■■□ 3.23
KRT18P38-201ENST00000449496 BAZ1BQ9UIG0 1483 aaKnown RBP35.16■■■■□ 3.22
KRT18P38-201ENST00000449496 WIZO95785 1651 aa34.97■■■■□ 3.19
KRT18P38-201ENST00000449496 NESP48681 1621 aa34.88■■■■□ 3.17
KRT18P38-201ENST00000449496 RSF1Q96T23 1441 aaPredicted RBP34.81■■■■□ 3.16
KRT18P38-201ENST00000449496 ERCC6Q03468 1493 aa34.72■■■■□ 3.15
KRT18P38-201ENST00000449496 LAMC3Q9Y6N6 1575 aa34.61■■■■□ 3.13
KRT18P38-201ENST00000449496 TOP2AP11388 1531 aaKnown RBP34.51■■■■□ 3.12
KRT18P38-201ENST00000449496 CUX2O14529 1486 aa34.46■■■■□ 3.11
KRT18P38-201ENST00000449496 CADPSQ9ULU8 1353 aa34.45■■■■□ 3.11
KRT18P38-201ENST00000449496 KIF21AQ7Z4S6 1674 aa34.42■■■■□ 3.1
KRT18P38-201ENST00000449496 THOC2Q8NI27 1593 aaKnown RBP34.39■■■■□ 3.1
KRT18P38-201ENST00000449496 PDS5BQ9NTI5 1447 aa34.35■■■■□ 3.09
KRT18P38-201ENST00000449496 CFTRP13569 1480 aa34.2■■■■□ 3.06
KRT18P38-201ENST00000449496 CCDC88BA6NC98 1476 aa34.14■■■■□ 3.06
KRT18P38-201ENST00000449496 FANCD2Q9BXW9 1451 aa34.08■■■■□ 3.05
KRT18P38-201ENST00000449496 MRC2Q9UBG0 1479 aa34.08■■■■□ 3.05
KRT18P38-201ENST00000449496 CEP164Q9UPV0 1460 aa34.05■■■■□ 3.04
KRT18P38-201ENST00000449496 WDR62O43379 1518 aa33.99■■■■□ 3.03
KRT18P38-201ENST00000449496 PRDM2Q13029 1718 aa33.9■■■■□ 3.02
KRT18P38-201ENST00000449496 DNAJC5Q9H3Z4 198 aa33.83■■■■□ 3.01
KRT18P38-201ENST00000449496 URB2Q14146 1524 aaKnown RBP33.83■■■■□ 3.01
KRT18P38-201ENST00000449496 SUPT5HO00267 1087 aaKnown RBP33.66■■■□□ 2.98
KRT18P38-201ENST00000449496 TOPBP1Q92547 1522 aa33.53■■■□□ 2.96
KRT18P38-201ENST00000449496 DNMBPQ6XZF7 1577 aa33.43■■■□□ 2.94
KRT18P38-201ENST00000449496 ABCC8Q09428 1581 aa33.36■■■□□ 2.93
KRT18P38-201ENST00000449496 IFT140Q96RY7 1462 aa33.33■■■□□ 2.93
KRT18P38-201ENST00000449496 ZNF608Q9ULD9 1512 aaPredicted RBP33.33■■■□□ 2.93
KRT18P38-201ENST00000449496 POLA1P09884 1462 aaPredicted RBP33.22■■■□□ 2.91
KRT18P38-201ENST00000449496 TARBP1Q13395 1621 aaKnown RBP33.2■■■□□ 2.91
KRT18P38-201ENST00000449496 CUX1P39880 1505 aa33.19■■■□□ 2.9
KRT18P38-201ENST00000449496 EIF4G3O43432 1585 aaKnown RBP33.14■■■□□ 2.9
KRT18P38-201ENST00000449496 RAD54L2Q9Y4B4 1467 aa33.13■■■□□ 2.89
KRT18P38-201ENST00000449496 FGD5Q6ZNL6 1462 aa33.1■■■□□ 2.89
KRT18P38-201ENST00000449496 AQRO60306 1485 aaKnown RBP eCLIP33.06■■■□□ 2.88
KRT18P38-201ENST00000449496 SOGA1O94964 1423 aa33.03■■■□□ 2.88
KRT18P38-201ENST00000449496 OSCARQ8IYS5 282 aa32.95■■■□□ 2.87
KRT18P38-201ENST00000449496 TDRD9Q8NDG6 1382 aaKnown RBP32.94■■■□□ 2.86
KRT18P38-201ENST00000449496 WDR97A6NE52 1622 aa32.87■■■□□ 2.85
KRT18P38-201ENST00000449496 CHD1O14646 1710 aa32.8■■■□□ 2.84
KRT18P38-201ENST00000449496 SYNJ1O43426 1573 aa32.8■■■□□ 2.84
KRT18P38-201ENST00000449496 WRNQ14191 1432 aaPredicted RBP eCLIP32.77■■■□□ 2.84
KRT18P38-201ENST00000449496 BIVM-ERCC5R4GMW8 1640 aa32.77■■■□□ 2.84
KRT18P38-201ENST00000449496 TOP2BQ02880 1626 aa32.75■■■□□ 2.83
KRT18P38-201ENST00000449496 SNAPC4Q5SXM2 1469 aa32.74■■■□□ 2.83
KRT18P38-201ENST00000449496 ABCA10Q8WWZ4 1543 aa32.72■■■□□ 2.83
KRT18P38-201ENST00000449496 GRIN2BQ13224 1484 aa32.67■■■□□ 2.82
KRT18P38-201ENST00000449496 FBLN2P98095 1184 aa32.66■■■□□ 2.82
KRT18P38-201ENST00000449496 ABCA5Q8WWZ7 1642 aa32.66■■■□□ 2.82
KRT18P38-201ENST00000449496 GAPVD1Q14C86 1478 aa32.65■■■□□ 2.82
KRT18P38-201ENST00000449496 PBRM1Q86U86 1689 aa32.65■■■□□ 2.82
KRT18P38-201ENST00000449496 TRIM41Q8WV44 630 aa32.62■■■□□ 2.81
KRT18P38-201ENST00000449496 MAGI1Q96QZ7 1491 aaPredicted RBP32.61■■■□□ 2.81
KRT18P38-201ENST00000449496 RIMBP3CA6NJZ7 1639 aa32.59■■■□□ 2.81
KRT18P38-201ENST00000449496 RIMBP3BA6NNM3 1639 aa32.59■■■□□ 2.81
KRT18P38-201ENST00000449496 RIMBP3Q9UFD9 1639 aa32.59■■■□□ 2.81
KRT18P38-201ENST00000449496 ARHGEF11O15085 1522 aa32.51■■■□□ 2.8
KRT18P38-201ENST00000449496 SYNJ2O15056 1496 aa32.5■■■□□ 2.79
KRT18P38-201ENST00000449496 CHMP7Q8WUX9 453 aaPredicted RBP32.48■■■□□ 2.79
KRT18P38-201ENST00000449496 CLASP1Q7Z460 1538 aa32.43■■■□□ 2.78
KRT18P38-201ENST00000449496 ADAMTS12P58397 1594 aa32.37■■■□□ 2.77
KRT18P38-201ENST00000449496 ERICH3Q5RHP9 1530 aa32.29■■■□□ 2.76
KRT18P38-201ENST00000449496 GRIN2AQ12879 1464 aa32.29■■■□□ 2.76
KRT18P38-201ENST00000449496 ARAP1Q96P48 1450 aa32.28■■■□□ 2.76
KRT18P38-201ENST00000449496 FHAD1B1AJZ9 1412 aa32.24■■■□□ 2.75
KRT18P38-201ENST00000449496 CEP170Q5SW79 1584 aa32.2■■■□□ 2.75
KRT18P38-201ENST00000449496 CYB5RLQ6IPT4 315 aa32.2■■■□□ 2.75
KRT18P38-201ENST00000449496 NUP160Q12769 1436 aa32.17■■■□□ 2.74
KRT18P38-201ENST00000449496 KIF27Q86VH2 1401 aa32.07■■■□□ 2.72
KRT18P38-201ENST00000449496 IGF1RP08069 1367 aa32.06■■■□□ 2.72
KRT18P38-201ENST00000449496 ERCC6L2Q5T890 1561 aa32.05■■■□□ 2.72
KRT18P38-201ENST00000449496 SHROOM2Q13796 1616 aa31.97■■■□□ 2.71
KRT18P38-201ENST00000449496 CUL7Q14999 1698 aa31.93■■■□□ 2.7
KRT18P38-201ENST00000449496 RUSC2Q8N2Y8 1516 aa31.9■■■□□ 2.7
KRT18P38-201ENST00000449496 CARMIL1Q5VZK9 1371 aa31.82■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms