RNA–Protein interactions for RNA: ENST00000264995.7

MRPL3-201, Transcript of mitochondrial ribosomal protein L3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL3, Length 1,706 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3-201ENST00000264995 NISCHQ9Y2I1 1504 aa45.02■■■■■ 4.8
MRPL3-201ENST00000264995 CCDC180Q9P1Z9 1646 aa39.8■■■■□ 3.96
MRPL3-201ENST00000264995 ABCC9O60706 1549 aa38.36■■■■□ 3.73
MRPL3-201ENST00000264995 ZCCHC6Q5VYS8 1495 aaKnown RBP37.62■■■■□ 3.61
MRPL3-201ENST00000264995 DCAF8L2P0C7V8 631 aa37.34■■■■□ 3.57
MRPL3-201ENST00000264995 DCAF1Q9Y4B6 1507 aa37.28■■■■□ 3.56
MRPL3-201ENST00000264995 NACADO15069 1562 aa37.26■■■■□ 3.56
MRPL3-201ENST00000264995 MYO15BQ96JP2 1530 aa37.23■■■■□ 3.55
MRPL3-201ENST00000264995 RB1CC1Q8TDY2 1594 aa37.16■■■■□ 3.54
MRPL3-201ENST00000264995 UNC13AQ9UPW8 1703 aa36.43■■■■□ 3.42
MRPL3-201ENST00000264995 SCRIBQ14160 1630 aa36.33■■■■□ 3.41
MRPL3-201ENST00000264995 BICRAQ9NZM4 1560 aa36.07■■■■□ 3.36
MRPL3-201ENST00000264995 PABPN1Q86U42 306 aaKnown RBP eCLIP35.94■■■■□ 3.34
MRPL3-201ENST00000264995 SHROOM4Q9ULL8 1493 aa35.87■■■■□ 3.33
MRPL3-201ENST00000264995 EIF4G1Q04637 1599 aaKnown RBP35.03■■■■□ 3.2
MRPL3-201ENST00000264995 CECR2Q9BXF3 1484 aa35.03■■■■□ 3.2
MRPL3-201ENST00000264995 BAZ1AQ9NRL2 1556 aaPredicted RBP34.84■■■■□ 3.17
MRPL3-201ENST00000264995 SMARCA4P51532 1647 aa34.83■■■■□ 3.17
MRPL3-201ENST00000264995 CC2D2AQ9P2K1 1620 aa34.76■■■■□ 3.16
MRPL3-201ENST00000264995 DNAJC5BQ9UF47 199 aa34.75■■■■□ 3.15
MRPL3-201ENST00000264995 MROH2BQ7Z745 1585 aa34.72■■■■□ 3.15
MRPL3-201ENST00000264995 RSF1Q96T23 1441 aaPredicted RBP34.51■■■■□ 3.11
MRPL3-201ENST00000264995 PEG3Q9GZU2 1588 aa34.49■■■■□ 3.11
MRPL3-201ENST00000264995 ATAD2BQ9ULI0 1458 aa34.48■■■■□ 3.11
MRPL3-201ENST00000264995 SMARCA2P51531 1590 aa34.45■■■■□ 3.11
MRPL3-201ENST00000264995 WIZO95785 1651 aa34.4■■■■□ 3.1
MRPL3-201ENST00000264995 NCAPD3P42695 1498 aa34.37■■■■□ 3.09
MRPL3-201ENST00000264995 HMGXB3Q12766 1538 aa34.26■■■■□ 3.07
MRPL3-201ENST00000264995 BAZ1BQ9UIG0 1483 aaKnown RBP34.2■■■■□ 3.07
MRPL3-201ENST00000264995 SUPT5HO00267 1087 aaKnown RBP34.03■■■■□ 3.04
MRPL3-201ENST00000264995 TOP2AP11388 1531 aaKnown RBP34.02■■■■□ 3.04
MRPL3-201ENST00000264995 CCDC88BA6NC98 1476 aa33.64■■■□□ 2.98
MRPL3-201ENST00000264995 NESP48681 1621 aa33.39■■■□□ 2.94
MRPL3-201ENST00000264995 CADPSQ9ULU8 1353 aa33.39■■■□□ 2.94
MRPL3-201ENST00000264995 LAMC3Q9Y6N6 1575 aa33.38■■■□□ 2.93
MRPL3-201ENST00000264995 CFTRP13569 1480 aa33.33■■■□□ 2.93
MRPL3-201ENST00000264995 PRDM2Q13029 1718 aa33.19■■■□□ 2.9
MRPL3-201ENST00000264995 PDS5BQ9NTI5 1447 aa33.11■■■□□ 2.89
MRPL3-201ENST00000264995 KIF21AQ7Z4S6 1674 aa33.05■■■□□ 2.88
MRPL3-201ENST00000264995 FANCD2Q9BXW9 1451 aa33.01■■■□□ 2.87
MRPL3-201ENST00000264995 ERCC6Q03468 1493 aa32.98■■■□□ 2.87
MRPL3-201ENST00000264995 CEP164Q9UPV0 1460 aa32.9■■■□□ 2.86
MRPL3-201ENST00000264995 THOC2Q8NI27 1593 aaKnown RBP32.77■■■□□ 2.84
MRPL3-201ENST00000264995 MRC2Q9UBG0 1479 aa32.74■■■□□ 2.83
MRPL3-201ENST00000264995 URB2Q14146 1524 aaKnown RBP32.67■■■□□ 2.82
MRPL3-201ENST00000264995 WDR62O43379 1518 aa32.63■■■□□ 2.81
MRPL3-201ENST00000264995 ABCC8Q09428 1581 aa32.59■■■□□ 2.81
MRPL3-201ENST00000264995 DNMBPQ6XZF7 1577 aa32.57■■■□□ 2.8
MRPL3-201ENST00000264995 TOPBP1Q92547 1522 aa32.56■■■□□ 2.8
MRPL3-201ENST00000264995 CUX1P39880 1505 aa32.53■■■□□ 2.8
MRPL3-201ENST00000264995 WRNQ14191 1432 aaPredicted RBP eCLIP32.5■■■□□ 2.79
MRPL3-201ENST00000264995 CUX2O14529 1486 aa32.46■■■□□ 2.79
MRPL3-201ENST00000264995 SYNJ1O43426 1573 aa32.43■■■□□ 2.78
MRPL3-201ENST00000264995 BIVM-ERCC5R4GMW8 1640 aa32.41■■■□□ 2.78
MRPL3-201ENST00000264995 TOP2BQ02880 1626 aa32.41■■■□□ 2.78
MRPL3-201ENST00000264995 POLA1P09884 1462 aaPredicted RBP32.32■■■□□ 2.76
MRPL3-201ENST00000264995 FGD5Q6ZNL6 1462 aa32.32■■■□□ 2.76
MRPL3-201ENST00000264995 TARBP1Q13395 1621 aaKnown RBP32.19■■■□□ 2.74
MRPL3-201ENST00000264995 IFT140Q96RY7 1462 aa32.18■■■□□ 2.74
MRPL3-201ENST00000264995 SOGA1O94964 1423 aa32.18■■■□□ 2.74
MRPL3-201ENST00000264995 RAD54L2Q9Y4B4 1467 aa32.17■■■□□ 2.74
MRPL3-201ENST00000264995 CHIC1Q5VXU3 224 aa32.12■■■□□ 2.73
MRPL3-201ENST00000264995 TRIM41Q8WV44 630 aa32.11■■■□□ 2.73
MRPL3-201ENST00000264995 WDR97A6NE52 1622 aa32.08■■■□□ 2.73
MRPL3-201ENST00000264995 ABCA10Q8WWZ4 1543 aa32.04■■■□□ 2.72
MRPL3-201ENST00000264995 ZNF608Q9ULD9 1512 aaPredicted RBP32.02■■■□□ 2.72
MRPL3-201ENST00000264995 TDRD9Q8NDG6 1382 aaKnown RBP31.93■■■□□ 2.7
MRPL3-201ENST00000264995 EIF4G3O43432 1585 aaKnown RBP31.93■■■□□ 2.7
MRPL3-201ENST00000264995 AQRO60306 1485 aaKnown RBP eCLIP31.91■■■□□ 2.72e-8■■■■■ 42.3
MRPL3-201ENST00000264995 ABCA5Q8WWZ7 1642 aa31.88■■■□□ 2.69
MRPL3-201ENST00000264995 GAPVD1Q14C86 1478 aa31.82■■■□□ 2.69
MRPL3-201ENST00000264995 PBRM1Q86U86 1689 aa31.77■■■□□ 2.68
MRPL3-201ENST00000264995 KIF27Q86VH2 1401 aa31.77■■■□□ 2.68
MRPL3-201ENST00000264995 GRIN2BQ13224 1484 aa31.73■■■□□ 2.67
MRPL3-201ENST00000264995 RUSC2Q8N2Y8 1516 aa31.71■■■□□ 2.67
MRPL3-201ENST00000264995 ERICH3Q5RHP9 1530 aa31.66■■■□□ 2.66
MRPL3-201ENST00000264995 SNAPC4Q5SXM2 1469 aa31.61■■■□□ 2.65
MRPL3-201ENST00000264995 IGF1RP08069 1367 aa31.6■■■□□ 2.65
MRPL3-201ENST00000264995 MAGI1Q96QZ7 1491 aaPredicted RBP31.59■■■□□ 2.65
MRPL3-201ENST00000264995 EEA1Q15075 1411 aa31.54■■■□□ 2.64
MRPL3-201ENST00000264995 ADAMTS12P58397 1594 aa31.51■■■□□ 2.64
MRPL3-201ENST00000264995 CUL7Q14999 1698 aa31.5■■■□□ 2.63
MRPL3-201ENST00000264995 FHAD1B1AJZ9 1412 aa31.47■■■□□ 2.63
MRPL3-201ENST00000264995 SYNJ2O15056 1496 aa31.46■■■□□ 2.63
MRPL3-201ENST00000264995 CHD1O14646 1710 aa31.46■■■□□ 2.63
MRPL3-201ENST00000264995 FAM9AQ8IZU1 332 aaPredicted RBP31.43■■■□□ 2.62
MRPL3-201ENST00000264995 CSRNP3Q8WYN3 585 aa31.43■■■□□ 2.62
MRPL3-201ENST00000264995 CARMIL1Q5VZK9 1371 aa31.41■■■□□ 2.62
MRPL3-201ENST00000264995 CHMP7Q8WUX9 453 aaPredicted RBP31.38■■■□□ 2.61
MRPL3-201ENST00000264995 FBLN2P98095 1184 aa31.37■■■□□ 2.61
MRPL3-201ENST00000264995 GRIN2AQ12879 1464 aa31.34■■■□□ 2.61
MRPL3-201ENST00000264995 PRXQ9BXM0 1461 aa31.33■■■□□ 2.61
MRPL3-201ENST00000264995 RAPGEF2Q9Y4G8 1499 aa31.29■■■□□ 2.6
MRPL3-201ENST00000264995 OSCARQ8IYS5 282 aa31.22■■■□□ 2.59
MRPL3-201ENST00000264995 KIF21BO75037 1637 aa31.2■■■□□ 2.59
MRPL3-201ENST00000264995 NUP160Q12769 1436 aa31.18■■■□□ 2.58
MRPL3-201ENST00000264995 CEP170Q5SW79 1584 aa31.18■■■□□ 2.58
MRPL3-201ENST00000264995 CLASP1Q7Z460 1538 aa31.09■■■□□ 2.57
MRPL3-201ENST00000264995 GOLGA3Q08378 1498 aa31.03■■■□□ 2.56
MRPL3-201ENST00000264995 CTTNBP2Q8WZ74 1663 aa31.02■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms