Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 TPT1-202ENST00000379055 948 ntTSL 2 BASIC19.98■□□□□ 0.79
TCRBV4S1A1TA0A5B7 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC19.98■□□□□ 0.79
TCRBV4S1A1TA0A5B7 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TCRBV4S1A1TA0A5B7 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
TCRBV4S1A1TA0A5B7 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC19.97■□□□□ 0.79
TCRBV4S1A1TA0A5B7 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
TCRBV4S1A1TA0A5B7 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TCRBV4S1A1TA0A5B7 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC19.95■□□□□ 0.78
TCRBV4S1A1TA0A5B7 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TCRBV4S1A1TA0A5B7 AC008813.1-201ENST00000536597 885 ntBASIC19.95■□□□□ 0.78
TCRBV4S1A1TA0A5B7 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
TCRBV4S1A1TA0A5B7 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
TCRBV4S1A1TA0A5B7 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC19.94■□□□□ 0.78
TCRBV4S1A1TA0A5B7 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TCRBV4S1A1TA0A5B7 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TCRBV4S1A1TA0A5B7 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC19.94■□□□□ 0.78
TCRBV4S1A1TA0A5B7 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TCRBV4S1A1TA0A5B7 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
TCRBV4S1A1TA0A5B7 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
TCRBV4S1A1TA0A5B7 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TCRBV4S1A1TA0A5B7 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
TCRBV4S1A1TA0A5B7 AC100797.4-201ENST00000631653 1827 ntBASIC19.93■□□□□ 0.78
TCRBV4S1A1TA0A5B7 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC19.93■□□□□ 0.78
TCRBV4S1A1TA0A5B7 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC19.93■□□□□ 0.78
TCRBV4S1A1TA0A5B7 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TCRBV4S1A1TA0A5B7 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC19.92■□□□□ 0.78
TCRBV4S1A1TA0A5B7 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TCRBV4S1A1TA0A5B7 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TCRBV4S1A1TA0A5B7 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC19.92■□□□□ 0.78
TCRBV4S1A1TA0A5B7 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC19.92■□□□□ 0.78
TCRBV4S1A1TA0A5B7 SRP68-213ENST00000629930 165 ntTSL 5 BASIC19.92■□□□□ 0.78
TCRBV4S1A1TA0A5B7 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TCRBV4S1A1TA0A5B7 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TCRBV4S1A1TA0A5B7 AC110285.7-201ENST00000624417 1536 ntBASIC19.92■□□□□ 0.78
TCRBV4S1A1TA0A5B7 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TCRBV4S1A1TA0A5B7 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
TCRBV4S1A1TA0A5B7 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TCRBV4S1A1TA0A5B7 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC19.91■□□□□ 0.78
TCRBV4S1A1TA0A5B7 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC19.91■□□□□ 0.78
TCRBV4S1A1TA0A5B7 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TCRBV4S1A1TA0A5B7 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
TCRBV4S1A1TA0A5B7 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
TCRBV4S1A1TA0A5B7 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC19.9■□□□□ 0.78
TCRBV4S1A1TA0A5B7 CEP120-209ENST00000515110 606 ntTSL 3 BASIC19.9■□□□□ 0.78
TCRBV4S1A1TA0A5B7 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TCRBV4S1A1TA0A5B7 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TCRBV4S1A1TA0A5B7 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TCRBV4S1A1TA0A5B7 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
TCRBV4S1A1TA0A5B7 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TCRBV4S1A1TA0A5B7 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
TCRBV4S1A1TA0A5B7 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TCRBV4S1A1TA0A5B7 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC19.89■□□□□ 0.77
TCRBV4S1A1TA0A5B7 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC19.89■□□□□ 0.77
TCRBV4S1A1TA0A5B7 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TCRBV4S1A1TA0A5B7 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
TCRBV4S1A1TA0A5B7 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TCRBV4S1A1TA0A5B7 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TCRBV4S1A1TA0A5B7 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TCRBV4S1A1TA0A5B7 GPX1-201ENST00000419349 1106 ntBASIC19.88■□□□□ 0.77
TCRBV4S1A1TA0A5B7 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC19.88■□□□□ 0.77
TCRBV4S1A1TA0A5B7 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TCRBV4S1A1TA0A5B7 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TCRBV4S1A1TA0A5B7 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC19.88■□□□□ 0.77
TCRBV4S1A1TA0A5B7 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC19.88■□□□□ 0.77
TCRBV4S1A1TA0A5B7 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TCRBV4S1A1TA0A5B7 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TCRBV4S1A1TA0A5B7 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TCRBV4S1A1TA0A5B7 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC19.87■□□□□ 0.77
TCRBV4S1A1TA0A5B7 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
TCRBV4S1A1TA0A5B7 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TCRBV4S1A1TA0A5B7 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TCRBV4S1A1TA0A5B7 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TCRBV4S1A1TA0A5B7 AP002414.2-202ENST00000590929 1450 ntBASIC19.86■□□□□ 0.77
TCRBV4S1A1TA0A5B7 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TCRBV4S1A1TA0A5B7 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TCRBV4S1A1TA0A5B7 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TCRBV4S1A1TA0A5B7 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TCRBV4S1A1TA0A5B7 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TCRBV4S1A1TA0A5B7 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TCRBV4S1A1TA0A5B7 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TCRBV4S1A1TA0A5B7 MEST-211ENST00000437945 1455 ntTSL 5 BASIC19.86■□□□□ 0.77
TCRBV4S1A1TA0A5B7 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TCRBV4S1A1TA0A5B7 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TCRBV4S1A1TA0A5B7 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TCRBV4S1A1TA0A5B7 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
TCRBV4S1A1TA0A5B7 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TCRBV4S1A1TA0A5B7 SHF-207ENST00000560540 2062 ntTSL 5 BASIC19.84■□□□□ 0.77
TCRBV4S1A1TA0A5B7 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC19.84■□□□□ 0.77
TCRBV4S1A1TA0A5B7 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC19.84■□□□□ 0.77
TCRBV4S1A1TA0A5B7 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC19.84■□□□□ 0.77
TCRBV4S1A1TA0A5B7 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TCRBV4S1A1TA0A5B7 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TCRBV4S1A1TA0A5B7 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
TCRBV4S1A1TA0A5B7 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TCRBV4S1A1TA0A5B7 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
TCRBV4S1A1TA0A5B7 AC022413.1-201ENST00000624602 984 ntBASIC19.83■□□□□ 0.77
TCRBV4S1A1TA0A5B7 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TCRBV4S1A1TA0A5B7 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
TCRBV4S1A1TA0A5B7 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC19.82■□□□□ 0.76
TCRBV4S1A1TA0A5B7 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 271 ms