Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC26.77■■□□□ 1.88
TCRBV4S1A1TA0A5B7 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
TCRBV4S1A1TA0A5B7 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC26.15■■□□□ 1.78
TCRBV4S1A1TA0A5B7 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
TCRBV4S1A1TA0A5B7 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC25.98■■□□□ 1.75
TCRBV4S1A1TA0A5B7 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
TCRBV4S1A1TA0A5B7 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
TCRBV4S1A1TA0A5B7 AL356512.1-201ENST00000607453 1739 ntBASIC25.77■■□□□ 1.72
TCRBV4S1A1TA0A5B7 HES6-203ENST00000409160 1600 ntTSL 2 BASIC25.74■■□□□ 1.71
TCRBV4S1A1TA0A5B7 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC25.72■■□□□ 1.71
TCRBV4S1A1TA0A5B7 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
TCRBV4S1A1TA0A5B7 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC25.55■■□□□ 1.68
TCRBV4S1A1TA0A5B7 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC25.45■■□□□ 1.66
TCRBV4S1A1TA0A5B7 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC25.18■■□□□ 1.62
TCRBV4S1A1TA0A5B7 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.62
TCRBV4S1A1TA0A5B7 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC25.14■■□□□ 1.61
TCRBV4S1A1TA0A5B7 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
TCRBV4S1A1TA0A5B7 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC25.03■■□□□ 1.6
TCRBV4S1A1TA0A5B7 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC25.01■■□□□ 1.59
TCRBV4S1A1TA0A5B7 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC24.99■■□□□ 1.59
TCRBV4S1A1TA0A5B7 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC24.94■■□□□ 1.58
TCRBV4S1A1TA0A5B7 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC24.89■■□□□ 1.57
TCRBV4S1A1TA0A5B7 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC24.8■■□□□ 1.56
TCRBV4S1A1TA0A5B7 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
TCRBV4S1A1TA0A5B7 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
TCRBV4S1A1TA0A5B7 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
TCRBV4S1A1TA0A5B7 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
TCRBV4S1A1TA0A5B7 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
TCRBV4S1A1TA0A5B7 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
TCRBV4S1A1TA0A5B7 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
TCRBV4S1A1TA0A5B7 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
TCRBV4S1A1TA0A5B7 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
TCRBV4S1A1TA0A5B7 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
TCRBV4S1A1TA0A5B7 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
TCRBV4S1A1TA0A5B7 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
TCRBV4S1A1TA0A5B7 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
TCRBV4S1A1TA0A5B7 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
TCRBV4S1A1TA0A5B7 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC24.29■■□□□ 1.48
TCRBV4S1A1TA0A5B7 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
TCRBV4S1A1TA0A5B7 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
TCRBV4S1A1TA0A5B7 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
TCRBV4S1A1TA0A5B7 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC24.26■■□□□ 1.47
TCRBV4S1A1TA0A5B7 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC24.24■■□□□ 1.47
TCRBV4S1A1TA0A5B7 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC24.18■■□□□ 1.46
TCRBV4S1A1TA0A5B7 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
TCRBV4S1A1TA0A5B7 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.46
TCRBV4S1A1TA0A5B7 INO80B-203ENST00000409917 796 ntTSL 2 BASIC24.11■■□□□ 1.45
TCRBV4S1A1TA0A5B7 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
TCRBV4S1A1TA0A5B7 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC23.9■■□□□ 1.42
TCRBV4S1A1TA0A5B7 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
TCRBV4S1A1TA0A5B7 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC23.87■■□□□ 1.41
TCRBV4S1A1TA0A5B7 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TCRBV4S1A1TA0A5B7 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC23.81■■□□□ 1.4
TCRBV4S1A1TA0A5B7 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TCRBV4S1A1TA0A5B7 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC23.79■■□□□ 1.4
TCRBV4S1A1TA0A5B7 AC015813.7-201ENST00000623294 581 ntBASIC23.78■■□□□ 1.4
TCRBV4S1A1TA0A5B7 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC23.77■■□□□ 1.4
TCRBV4S1A1TA0A5B7 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
TCRBV4S1A1TA0A5B7 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC23.75■■□□□ 1.39
TCRBV4S1A1TA0A5B7 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TCRBV4S1A1TA0A5B7 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
TCRBV4S1A1TA0A5B7 AC006077.2-201ENST00000623591 457 ntBASIC23.69■■□□□ 1.38
TCRBV4S1A1TA0A5B7 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TCRBV4S1A1TA0A5B7 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TCRBV4S1A1TA0A5B7 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
TCRBV4S1A1TA0A5B7 ZNRF2P1-201ENST00000441407 443 ntBASIC23.64■■□□□ 1.37
TCRBV4S1A1TA0A5B7 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
TCRBV4S1A1TA0A5B7 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TCRBV4S1A1TA0A5B7 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
TCRBV4S1A1TA0A5B7 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
TCRBV4S1A1TA0A5B7 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC23.43■■□□□ 1.34
TCRBV4S1A1TA0A5B7 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
TCRBV4S1A1TA0A5B7 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TCRBV4S1A1TA0A5B7 ILK-212ENST00000532063 1617 ntTSL 2 BASIC23.39■■□□□ 1.33
TCRBV4S1A1TA0A5B7 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC23.36■■□□□ 1.33
TCRBV4S1A1TA0A5B7 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TCRBV4S1A1TA0A5B7 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
TCRBV4S1A1TA0A5B7 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
TCRBV4S1A1TA0A5B7 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
TCRBV4S1A1TA0A5B7 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TCRBV4S1A1TA0A5B7 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC23.28■■□□□ 1.32
TCRBV4S1A1TA0A5B7 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
TCRBV4S1A1TA0A5B7 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
TCRBV4S1A1TA0A5B7 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TCRBV4S1A1TA0A5B7 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TCRBV4S1A1TA0A5B7 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TCRBV4S1A1TA0A5B7 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
TCRBV4S1A1TA0A5B7 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
TCRBV4S1A1TA0A5B7 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
TCRBV4S1A1TA0A5B7 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TCRBV4S1A1TA0A5B7 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
TCRBV4S1A1TA0A5B7 AP002365.1-201ENST00000603448 772 ntBASIC23.07■■□□□ 1.28
TCRBV4S1A1TA0A5B7 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
TCRBV4S1A1TA0A5B7 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
TCRBV4S1A1TA0A5B7 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TCRBV4S1A1TA0A5B7 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC23.03■■□□□ 1.28
TCRBV4S1A1TA0A5B7 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TCRBV4S1A1TA0A5B7 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
TCRBV4S1A1TA0A5B7 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC23.01■■□□□ 1.27
TCRBV4S1A1TA0A5B7 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms