RNA–Protein interactions for RNA: ENST00000625924.1

RUNX2-211, Transcript of runt related transcription factor 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RUNX2, Length 1,458 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX2-211ENST00000625924 NISCHQ9Y2I1 1504 aa61.91■■■■■ 7.5
RUNX2-211ENST00000625924 CCDC180Q9P1Z9 1646 aa55.16■■■■■ 6.42
RUNX2-211ENST00000625924 ABCC9O60706 1549 aa54.52■■■■■ 6.32
RUNX2-211ENST00000625924 RB1CC1Q8TDY2 1594 aa52.14■■■■■ 5.94
RUNX2-211ENST00000625924 DCAF8L2P0C7V8 631 aa52.05■■■■■ 5.92
RUNX2-211ENST00000625924 NACADO15069 1562 aa51.96■■■■■ 5.91
RUNX2-211ENST00000625924 ZCCHC6Q5VYS8 1495 aaKnown RBP51.46■■■■■ 5.83
RUNX2-211ENST00000625924 MYO15BQ96JP2 1530 aa51.45■■■■■ 5.83
RUNX2-211ENST00000625924 UNC13AQ9UPW8 1703 aa51.11■■■■■ 5.77
RUNX2-211ENST00000625924 DCAF1Q9Y4B6 1507 aa51.1■■■■■ 5.77
RUNX2-211ENST00000625924 PABPN1Q86U42 306 aaKnown RBP eCLIP50.94■■■■■ 5.75
RUNX2-211ENST00000625924 BICRAQ9NZM4 1560 aa50.68■■■■■ 5.7
RUNX2-211ENST00000625924 DNAJC5BQ9UF47 199 aa50.52■■■■■ 5.68
RUNX2-211ENST00000625924 SCRIBQ14160 1630 aa50.43■■■■■ 5.66
RUNX2-211ENST00000625924 SHROOM4Q9ULL8 1493 aa49.88■■■■■ 5.57
RUNX2-211ENST00000625924 EIF4G1Q04637 1599 aaKnown RBP49.33■■■■■ 5.49
RUNX2-211ENST00000625924 CC2D2AQ9P2K1 1620 aa49.27■■■■■ 5.48
RUNX2-211ENST00000625924 CECR2Q9BXF3 1484 aa48.98■■■■■ 5.43
RUNX2-211ENST00000625924 SMARCA4P51532 1647 aa48.13■■■■■ 5.3
RUNX2-211ENST00000625924 NCAPD3P42695 1498 aa47.98■■■■■ 5.27
RUNX2-211ENST00000625924 ATAD2BQ9ULI0 1458 aa47.98■■■■■ 5.27
RUNX2-211ENST00000625924 BAZ1AQ9NRL2 1556 aaPredicted RBP47.97■■■■■ 5.27
RUNX2-211ENST00000625924 SMARCA2P51531 1590 aa47.84■■■■■ 5.25
RUNX2-211ENST00000625924 MROH2BQ7Z745 1585 aa47.77■■■■■ 5.24
RUNX2-211ENST00000625924 HMGXB3Q12766 1538 aa47.67■■■■■ 5.22
RUNX2-211ENST00000625924 PEG3Q9GZU2 1588 aa47.61■■■■■ 5.21
RUNX2-211ENST00000625924 BAZ1BQ9UIG0 1483 aaKnown RBP47.54■■■■■ 5.2
RUNX2-211ENST00000625924 WIZO95785 1651 aa47.26■■■■■ 5.16
RUNX2-211ENST00000625924 NESP48681 1621 aa47.09■■■■■ 5.13
RUNX2-211ENST00000625924 RSF1Q96T23 1441 aaPredicted RBP47.04■■■■■ 5.12
RUNX2-211ENST00000625924 ERCC6Q03468 1493 aa46.95■■■■■ 5.11
RUNX2-211ENST00000625924 LAMC3Q9Y6N6 1575 aa46.76■■■■■ 5.08
RUNX2-211ENST00000625924 TOP2AP11388 1531 aaKnown RBP46.62■■■■■ 5.05
RUNX2-211ENST00000625924 CADPSQ9ULU8 1353 aa46.58■■■■■ 5.05
RUNX2-211ENST00000625924 CUX2O14529 1486 aa46.54■■■■■ 5.04
RUNX2-211ENST00000625924 KIF21AQ7Z4S6 1674 aa46.5■■■■■ 5.03
RUNX2-211ENST00000625924 PDS5BQ9NTI5 1447 aa46.46■■■■■ 5.03
RUNX2-211ENST00000625924 THOC2Q8NI27 1593 aaKnown RBP46.38■■■■■ 5.02
RUNX2-211ENST00000625924 CFTRP13569 1480 aa46.21■■■■■ 4.99
RUNX2-211ENST00000625924 CCDC88BA6NC98 1476 aa46.15■■■■■ 4.98
RUNX2-211ENST00000625924 FANCD2Q9BXW9 1451 aa46.06■■■■■ 4.96
RUNX2-211ENST00000625924 MRC2Q9UBG0 1479 aa46.03■■■■■ 4.96
RUNX2-211ENST00000625924 CEP164Q9UPV0 1460 aa46.01■■■■■ 4.96
RUNX2-211ENST00000625924 WDR62O43379 1518 aa45.9■■■■■ 4.94
RUNX2-211ENST00000625924 PRDM2Q13029 1718 aa45.84■■■■■ 4.93
RUNX2-211ENST00000625924 DNAJC5Q9H3Z4 198 aa45.72■■■■■ 4.91
RUNX2-211ENST00000625924 URB2Q14146 1524 aaKnown RBP45.66■■■■■ 4.9
RUNX2-211ENST00000625924 SUPT5HO00267 1087 aaKnown RBP45.64■■■■■ 4.9
RUNX2-211ENST00000625924 TOPBP1Q92547 1522 aa45.28■■■■■ 4.84
RUNX2-211ENST00000625924 DNMBPQ6XZF7 1577 aa45.16■■■■■ 4.82
RUNX2-211ENST00000625924 ABCC8Q09428 1581 aa45.16■■■■■ 4.82
RUNX2-211ENST00000625924 IFT140Q96RY7 1462 aa45.06■■■■■ 4.8
RUNX2-211ENST00000625924 ZNF608Q9ULD9 1512 aaPredicted RBP45■■■■■ 4.79
RUNX2-211ENST00000625924 POLA1P09884 1462 aaPredicted RBP44.88■■■■■ 4.77
RUNX2-211ENST00000625924 TARBP1Q13395 1621 aaKnown RBP44.84■■■■■ 4.77
RUNX2-211ENST00000625924 CUX1P39880 1505 aa44.81■■■■■ 4.76
RUNX2-211ENST00000625924 RAD54L2Q9Y4B4 1467 aa44.76■■■■■ 4.76
RUNX2-211ENST00000625924 EIF4G3O43432 1585 aaKnown RBP44.75■■■■■ 4.75
RUNX2-211ENST00000625924 FGD5Q6ZNL6 1462 aa44.71■■■■■ 4.75
RUNX2-211ENST00000625924 AQRO60306 1485 aaKnown RBP eCLIP44.7■■■■■ 4.75
RUNX2-211ENST00000625924 SOGA1O94964 1423 aa44.69■■■■■ 4.74
RUNX2-211ENST00000625924 OSCARQ8IYS5 282 aa44.62■■■■■ 4.73
RUNX2-211ENST00000625924 TDRD9Q8NDG6 1382 aaKnown RBP44.55■■■■■ 4.72
RUNX2-211ENST00000625924 WDR97A6NE52 1622 aa44.36■■■■■ 4.69
RUNX2-211ENST00000625924 WRNQ14191 1432 aaPredicted RBP eCLIP44.33■■■■■ 4.69
RUNX2-211ENST00000625924 CHD1O14646 1710 aa44.31■■■■■ 4.68
RUNX2-211ENST00000625924 SYNJ1O43426 1573 aa44.31■■■■■ 4.68
RUNX2-211ENST00000625924 TOP2BQ02880 1626 aa44.28■■■■■ 4.68
RUNX2-211ENST00000625924 BIVM-ERCC5R4GMW8 1640 aa44.28■■■■■ 4.68
RUNX2-211ENST00000625924 FBLN2P98095 1184 aa44.26■■■■■ 4.68
RUNX2-211ENST00000625924 SNAPC4Q5SXM2 1469 aa44.22■■■■■ 4.67
RUNX2-211ENST00000625924 ABCA10Q8WWZ4 1543 aa44.21■■■■■ 4.67
RUNX2-211ENST00000625924 GRIN2BQ13224 1484 aa44.17■■■■■ 4.66
RUNX2-211ENST00000625924 GAPVD1Q14C86 1478 aa44.15■■■■■ 4.66
RUNX2-211ENST00000625924 PBRM1Q86U86 1689 aa44.12■■■■■ 4.65
RUNX2-211ENST00000625924 TRIM41Q8WV44 630 aa44.11■■■■■ 4.65
RUNX2-211ENST00000625924 ABCA5Q8WWZ7 1642 aa44.1■■■■■ 4.65
RUNX2-211ENST00000625924 MAGI1Q96QZ7 1491 aaPredicted RBP44.08■■■■■ 4.65
RUNX2-211ENST00000625924 CHMP7Q8WUX9 453 aaPredicted RBP44.01■■■■■ 4.64
RUNX2-211ENST00000625924 RIMBP3CA6NJZ7 1639 aa43.99■■■■■ 4.63
RUNX2-211ENST00000625924 RIMBP3BA6NNM3 1639 aa43.99■■■■■ 4.63
RUNX2-211ENST00000625924 RIMBP3Q9UFD9 1639 aa43.99■■■■■ 4.63
RUNX2-211ENST00000625924 SYNJ2O15056 1496 aa43.94■■■■■ 4.62
RUNX2-211ENST00000625924 ARHGEF11O15085 1522 aa43.9■■■■■ 4.62
RUNX2-211ENST00000625924 CLASP1Q7Z460 1538 aa43.76■■■■■ 4.6
RUNX2-211ENST00000625924 ADAMTS12P58397 1594 aa43.7■■■■■ 4.59
RUNX2-211ENST00000625924 ERICH3Q5RHP9 1530 aa43.66■■■■■ 4.58
RUNX2-211ENST00000625924 GRIN2AQ12879 1464 aa43.63■■■■■ 4.57
RUNX2-211ENST00000625924 CYB5RLQ6IPT4 315 aa43.59■■■■■ 4.57
RUNX2-211ENST00000625924 FHAD1B1AJZ9 1412 aa43.59■■■■■ 4.57
RUNX2-211ENST00000625924 ARAP1Q96P48 1450 aa43.54■■■■■ 4.56
RUNX2-211ENST00000625924 CEP170Q5SW79 1584 aa43.48■■■■■ 4.55
RUNX2-211ENST00000625924 NUP160Q12769 1436 aa43.44■■■■■ 4.54
RUNX2-211ENST00000625924 KIF27Q86VH2 1401 aa43.41■■■■■ 4.54
RUNX2-211ENST00000625924 IGF1RP08069 1367 aa43.36■■■■■ 4.53
RUNX2-211ENST00000625924 ERCC6L2Q5T890 1561 aa43.24■■■■■ 4.51
RUNX2-211ENST00000625924 CUL7Q14999 1698 aa43.18■■■■■ 4.5
RUNX2-211ENST00000625924 SHROOM2Q13796 1616 aa43.17■■■■■ 4.5
RUNX2-211ENST00000625924 RUSC2Q8N2Y8 1516 aa43.07■■■■■ 4.49
RUNX2-211ENST00000625924 CARMIL1Q5VZK9 1371 aa43.07■■■■■ 4.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms