Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 USP39-207ENST00000450066 2086 ntTSL 2 BASIC13.47□□□□□ -0.253e-6■■□□□ 12.2
NCBP2P52298 USP39-206ENST00000448971 610 ntTSL 313.45□□□□□ -0.263e-6■■□□□ 12.2
NCBP2P52298 USP39-220ENST00000613444 2161 ntTSL 2 BASIC13.43□□□□□ -0.263e-6■■□□□ 12.2
NCBP2P52298 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.283e-6■■□□□ 12.2
NCBP2P52298 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.313e-6■■□□□ 12.2
NCBP2P52298 DAZAP1-208ENST00000589874 3642 nt13.11□□□□□ -0.313e-6■■□□□ 12.2
NCBP2P52298 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.353e-6■■□□□ 12.2
NCBP2P52298 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.363e-6■■□□□ 12.2
NCBP2P52298 MIS12-202ENST00000573759 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.413e-6■■□□□ 12.2
NCBP2P52298 TMEM120B-204ENST00000449592 7461 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.429e-9■■□□□ 12.2
NCBP2P52298 DAZAP1-203ENST00000585485 3943 ntTSL 212.26□□□□□ -0.453e-6■■□□□ 12.2
NCBP2P52298 MIS12-203ENST00000574186 267 ntTSL 312.24□□□□□ -0.453e-6■■□□□ 12.2
NCBP2P52298 MIS12-204ENST00000576570 945 ntTSL 312.14□□□□□ -0.473e-6■■□□□ 12.2
NCBP2P52298 CBY1-208ENST00000489847 776 ntTSL 211.84□□□□□ -0.513e-6■■□□□ 12.2
NCBP2P52298 MIS12-206ENST00000611091 2691 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.583e-6■■□□□ 12.2
NCBP2P52298 DIAPH2-203ENST00000373049 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.583e-6■■□□□ 12.2
NCBP2P52298 EXOSC9-202ENST00000379663 1529 ntTSL 1 (best) BASIC11.27□□□□□ -0.613e-6■■□□□ 12.2
NCBP2P52298 EXOSC9-210ENST00000511454 733 ntTSL 511.22□□□□□ -0.613e-6■■□□□ 12.2
NCBP2P52298 DIAPH2-201ENST00000324765 9333 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.633e-6■■□□□ 12.2
NCBP2P52298 RETREG2-208ENST00000458520 992 ntTSL 310.98□□□□□ -0.653e-6■■□□□ 12.2
NCBP2P52298 ANKZF1-215ENST00000468387 561 ntTSL 1 (best)10.1□□□□□ -0.793e-6■■□□□ 12.2
NCBP2P52298 EXOC6-202ENST00000371543 2714 ntTSL 2 BASIC10.04□□□□□ -0.83e-6■■□□□ 12.2
NCBP2P52298 USP39-210ENST00000459775 2148 ntTSL 29.65□□□□□ -0.863e-6■■□□□ 12.2
NCBP2P52298 ANKZF1-213ENST00000465550 2793 ntTSL 29.63□□□□□ -0.873e-6■■□□□ 12.2
NCBP2P52298 ZMIZ2-203ENST00000413916 3773 ntTSL 1 (best) BASIC9.6□□□□□ -0.879e-9■■□□□ 12.2
NCBP2P52298 CPNE1-214ENST00000435747 400 ntTSL 39.29□□□□□ -0.923e-6■■□□□ 12.2
NCBP2P52298 USP39-214ENST00000474572 293 ntTSL 49.26□□□□□ -0.933e-6■■□□□ 12.2
NCBP2P52298 EXOSC9-208ENST00000509980 1317 ntTSL 29.01□□□□□ -0.973e-6■■□□□ 12.2
NCBP2P52298 ACTN4-207ENST00000495553 586 ntTSL 58.91□□□□□ -0.983e-6■■□□□ 12.2
NCBP2P52298 OSBPL8-215ENST00000552178 269 ntTSL 38.61□□□□□ -1.033e-6■■□□□ 12.2
NCBP2P52298 EXOSC9-201ENST00000243498 1481 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.043e-6■■□□□ 12.2
NCBP2P52298 EXOC6-204ENST00000443748 3310 ntTSL 1 (best) BASIC8.49□□□□□ -1.053e-6■■□□□ 12.2
NCBP2P52298 C18orf32-203ENST00000613385 5395 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.13e-6■■□□□ 12.2
NCBP2P52298 EXOC6-201ENST00000260762 3564 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.193e-6■■□□□ 12.2
NCBP2P52298 RPL17-C18orf32-202ENST00000577910 1012 ntTSL 57.06□□□□□ -1.283e-6■■□□□ 12.2
NCBP2P52298 EXOSC9-212ENST00000513654 3882 ntTSL 26.15□□□□□ -1.433e-6■■□□□ 12.2
NCBP2P52298 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.463e-6■■□□□ 12.2
NCBP2P52298 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.473e-6■■□□□ 12.2
NCBP2P52298 EXOSC9-207ENST00000509800 757 ntTSL 34.99□□□□□ -1.613e-6■■□□□ 12.2
NCBP2P52298 LRMDA-210ENST00000593817 221 ntTSL 34.48□□□□□ -1.693e-6■■□□□ 12.2
NCBP2P52298 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.36□□□□□ -1.873e-6■■□□□ 12.2
NCBP2P52298 PPHLN1-209ENST00000546750 588 ntTSL 42.96□□□□□ -1.943e-6■■□□□ 12.2
NCBP2P52298 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.43□□□□□ -2.023e-6■■□□□ 12.2
NCBP2P52298 MIS12-205ENST00000576988 551 ntTSL 42.41□□□□□ -2.023e-6■■□□□ 12.2
NCBP2P52298 PPHLN1-212ENST00000547847 576 ntTSL 32.29□□□□□ -2.043e-6■■□□□ 12.2
NCBP2P52298 ANKRD11-204ENST00000378332 1982 ntTSL 219.98■□□□□ 0.798e-7■■□□□ 12.2
NCBP2P52298 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.348e-7■■□□□ 12.2
NCBP2P52298 VSNL1-206ENST00000483921 561 ntTSL 414.26□□□□□ -0.139e-16■■□□□ 12.1
NCBP2P52298 VSNL1-202ENST00000404666 992 ntAPPRIS P1 TSL 3 BASIC10.62□□□□□ -0.719e-16■■□□□ 12.1
NCBP2P52298 VSNL1-201ENST00000295156 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.859e-16■■□□□ 12.1
NCBP2P52298 VSNL1-204ENST00000451533 562 ntTSL 48.88□□□□□ -0.999e-16■■□□□ 12.1
NCBP2P52298 VSNL1-205ENST00000457525 576 ntTSL 35.02□□□□□ -1.619e-16■■□□□ 12.1
NCBP2P52298 SCAF8-204ENST00000461219 677 ntTSL 518.92■□□□□ 0.623e-9■■□□□ 12.1
NCBP2P52298 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.183e-9■■□□□ 12.1
NCBP2P52298 SCAF8-203ENST00000417268 4944 ntTSL 2 BASIC12.3□□□□□ -0.443e-9■■□□□ 12.1
NCBP2P52298 SCAF8-202ENST00000367186 4908 ntTSL 2 BASIC10.24□□□□□ -0.773e-9■■□□□ 12.1
NCBP2P52298 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.8■□□□□ 0.442e-8■■□□□ 12.1
NCBP2P52298 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.422e-8■■□□□ 12.1
NCBP2P52298 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.6■□□□□ 0.252e-8■■□□□ 12.1
NCBP2P52298 GLYCTK-208ENST00000486393 2019 ntTSL 1 (best)16.5■□□□□ 0.232e-8■■□□□ 12.1
NCBP2P52298 GLYCTK-206ENST00000473583 1021 ntTSL 1 (best)15.66■□□□□ 0.12e-8■■□□□ 12.1
NCBP2P52298 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC13.61□□□□□ -0.232e-8■■□□□ 12.1
NCBP2P52298 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC12.14□□□□□ -0.472e-8■■□□□ 12.1
NCBP2P52298 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.942e-8■■□□□ 12.1
NCBP2P52298 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.762e-8■■□□□ 12.1
NCBP2P52298 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.27■□□□□ 0.522e-8■■□□□ 12.1
NCBP2P52298 TMEM259-205ENST00000586704 2538 ntTSL 516.97■□□□□ 0.312e-8■■□□□ 12.1
NCBP2P52298 TMEM259-211ENST00000593068 1965 ntTSL 516.87■□□□□ 0.292e-8■■□□□ 12.1
NCBP2P52298 LSS-206ENST00000464357 1041 ntTSL 519.29■□□□□ 0.681e-11■■□□□ 12.1
NCBP2P52298 LSS-204ENST00000450351 853 ntTSL 516.94■□□□□ 0.31e-11■■□□□ 12.1
NCBP2P52298 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.45■□□□□ 0.061e-11■■□□□ 12.1
NCBP2P52298 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.011e-11■■□□□ 12.1
NCBP2P52298 LSS-207ENST00000472272 581 ntTSL 214.1□□□□□ -0.151e-11■■□□□ 12.1
NCBP2P52298 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.47□□□□□ -0.251e-11■■□□□ 12.1
NCBP2P52298 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.31e-11■■□□□ 12.1
NCBP2P52298 PPP6R3-217ENST00000529344 603 ntTSL 414.52□□□□□ -0.095e-8■■□□□ 12.1
NCBP2P52298 PPP6R3-215ENST00000528635 538 ntTSL 414.52□□□□□ -0.095e-8■■□□□ 12.1
NCBP2P52298 PPP6R3-204ENST00000393801 5069 ntTSL 1 (best) BASIC11.29□□□□□ -0.65e-8■■□□□ 12.1
NCBP2P52298 PPP6R3-220ENST00000530427 560 ntTSL 510.67□□□□□ -0.75e-8■■□□□ 12.1
NCBP2P52298 PPP6R3-203ENST00000393800 5093 ntAPPRIS P4 TSL 1 (best) BASIC10.62□□□□□ -0.715e-8■■□□□ 12.1
NCBP2P52298 PPP6R3-205ENST00000524845 2771 ntTSL 1 (best) BASIC10.41□□□□□ -0.745e-8■■□□□ 12.1
NCBP2P52298 PPP6R3-226ENST00000534534 2968 ntTSL 2 BASIC10.21□□□□□ -0.785e-8■■□□□ 12.1
NCBP2P52298 PPP6R3-202ENST00000265637 4783 ntTSL 5 BASIC9.8□□□□□ -0.845e-8■■□□□ 12.1
NCBP2P52298 PPP6R3-219ENST00000529907 826 ntTSL 59.06□□□□□ -0.965e-8■■□□□ 12.1
NCBP2P52298 PPP6R3-224ENST00000533127 551 ntTSL 49.06□□□□□ -0.965e-8■■□□□ 12.1
NCBP2P52298 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC7.17□□□□□ -1.265e-8■■□□□ 12.1
NCBP2P52298 NOL4L-208ENST00000475781 1127 ntTSL 515.88■□□□□ 0.139e-8■■□□□ 12.1
NCBP2P52298 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.44■□□□□ 0.069e-8■■□□□ 12.1
NCBP2P52298 NOL4L-203ENST00000359676 5991 ntTSL 2 BASIC11.95□□□□□ -0.59e-8■■□□□ 12.1
NCBP2P52298 HIVEP2-201ENST00000012134 9755 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.934e-7■■□□□ 12.1
NCBP2P52298 HIVEP2-202ENST00000367603 9724 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.14e-7■■□□□ 12.1
NCBP2P52298 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.133e-11■■□□□ 12.1
NCBP2P52298 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC12.61□□□□□ -0.393e-11■■□□□ 12.1
NCBP2P52298 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.466e-6■■□□□ 12.1
NCBP2P52298 TJP1-210ENST00000558447 720 ntTSL 324.09■■□□□ 1.456e-6■■□□□ 12.1
NCBP2P52298 PREB-203ENST00000416802 564 ntTSL 422.36■■□□□ 1.176e-6■■□□□ 12.1
NCBP2P52298 PREB-202ENST00000406567 1910 ntTSL 5 BASIC22.08■■□□□ 1.126e-6■■□□□ 12.1
NCBP2P52298 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.096e-6■■□□□ 12.1
NCBP2P52298 PLPP5-208ENST00000528814 1590 ntTSL 521.76■■□□□ 1.076e-6■■□□□ 12.1
NCBP2P52298 PREB-206ENST00000444452 2030 ntTSL 1 (best)21.13■□□□□ 0.976e-6■■□□□ 12.1
Retrieved 100 of 18,329 protein–RNA pairs in 178 ms