RNA–Protein interactions for RNA: ENST00000451533.5

VSNL1-204, Transcript of visinin like 1, humanhuman

TSL 4

Gene VSNL1, Length 562 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSNL1-204ENST00000451533 AEBP2Q6ZN18 517 aaPredicted RBP29.47■■■□□ 2.31
VSNL1-204ENST00000451533 CHIC1Q5VXU3 224 aa28■■■□□ 2.07
VSNL1-204ENST00000451533 SENP3Q9H4L4 574 aaPredicted RBP25.19■■□□□ 1.62
VSNL1-204ENST00000451533 PHF23Q9BUL5 403 aaPredicted RBP24.86■■□□□ 1.57
VSNL1-204ENST00000451533 FOXD1Q16676 465 aa23.46■■□□□ 1.35
VSNL1-204ENST00000451533 PLPPR3Q6T4P5 718 aa22.39■■□□□ 1.17
VSNL1-204ENST00000451533 MSH5O43196 834 aa21.99■■□□□ 1.11
VSNL1-204ENST00000451533 PIAS4Q8N2W9 510 aaPredicted RBP21.95■■□□□ 1.1
VSNL1-204ENST00000451533 PPP6R1Q9UPN7 881 aa21.91■■□□□ 1.1
VSNL1-204ENST00000451533 ADRA2BP18089 450 aa21.87■■□□□ 1.09
VSNL1-204ENST00000451533 POTEDQ86YR6 584 aa21.47■■□□□ 1.03
VSNL1-204ENST00000451533 MAPK8IP2Q13387 824 aaPredicted RBP20.08■□□□□ 0.81
VSNL1-204ENST00000451533 SCAF1Q9H7N4 1312 aaKnown RBP20.04■□□□□ 0.8
VSNL1-204ENST00000451533 DMRT2Q9Y5R5 561 aa19.96■□□□□ 0.79
VSNL1-204ENST00000451533 PPP4R3CPQ6ZMV5 832 aa19.62■□□□□ 0.73
VSNL1-204ENST00000451533 NISCHQ9Y2I1 1504 aa19.56■□□□□ 0.72
VSNL1-204ENST00000451533 CNKSR2Q8WXI2 1034 aa19.25■□□□□ 0.67
VSNL1-204ENST00000451533 DCAF8L1A6NGE4 600 aa19.22■□□□□ 0.67
VSNL1-204ENST00000451533 HOXD11P31277 338 aaPredicted RBP19.2■□□□□ 0.66
VSNL1-204ENST00000451533 RNF216Q9NWF9 866 aaPredicted RBP19.07■□□□□ 0.64
VSNL1-204ENST00000451533 CACNB1Q02641 598 aaPredicted RBP18.9■□□□□ 0.62
VSNL1-204ENST00000451533 NCBP3Q53F19 620 aaKnown RBP18.89■□□□□ 0.61
VSNL1-204ENST00000451533 RNF39Q9H2S5 420 aa18.73■□□□□ 0.59
VSNL1-204ENST00000451533 NPM3O75607 178 aaKnown RBP18.58■□□□□ 0.56
VSNL1-204ENST00000451533 DNAJC5BQ9UF47 199 aa18.53■□□□□ 0.56
VSNL1-204ENST00000451533 C1QBPQ07021 282 aaKnown RBP18.48■□□□□ 0.55
VSNL1-204ENST00000451533 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.36■□□□□ 0.534e-12■■■□□ 18.6
VSNL1-204ENST00000451533 KCNA4P22459 653 aa18.21■□□□□ 0.51
VSNL1-204ENST00000451533 U3KPZ7 1027 aaPredicted RBP17.92■□□□□ 0.46
VSNL1-204ENST00000451533 SLC4A2P04920 1241 aa17.72■□□□□ 0.43
VSNL1-204ENST00000451533 CAPN15O75808 1086 aa17.69■□□□□ 0.42
VSNL1-204ENST00000451533 SPINK5Q9NQ38 1064 aaPredicted RBP17.68■□□□□ 0.42
VSNL1-204ENST00000451533 DSG3P32926 999 aa17.55■□□□□ 0.4
VSNL1-204ENST00000451533 APLP2Q06481 763 aa17.48■□□□□ 0.39
VSNL1-204ENST00000451533 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.45■□□□□ 0.38
VSNL1-204ENST00000451533 HNRNPUL2Q1KMD3 747 aaKnown RBP17.45■□□□□ 0.38
VSNL1-204ENST00000451533 TRHP20396 242 aaPredicted RBP17.4■□□□□ 0.38
VSNL1-204ENST00000451533 ZNF219Q9P2Y4 722 aaPredicted RBP17.36■□□□□ 0.37
VSNL1-204ENST00000451533 SAMD1Q6SPF0 538 aaPredicted RBP17.34■□□□□ 0.37
VSNL1-204ENST00000451533 ABCB7O75027 752 aa17.26■□□□□ 0.35
VSNL1-204ENST00000451533 SLC4A1APQ9BWU0 796 aaKnown RBP17.21■□□□□ 0.35
VSNL1-204ENST00000451533 MYCNP04198 464 aaPredicted RBP17.2■□□□□ 0.34
VSNL1-204ENST00000451533 FOXD4L1Q9NU39 408 aa17.01■□□□□ 0.31
VSNL1-204ENST00000451533 CCDC180Q9P1Z9 1646 aa16.99■□□□□ 0.31
VSNL1-204ENST00000451533 POLA2Q14181 598 aa16.91■□□□□ 0.3
VSNL1-204ENST00000451533 POTEHQ6S545 545 aa16.83■□□□□ 0.28
VSNL1-204ENST00000451533 RBM42Q9BTD8 480 aaKnown RBP16.78■□□□□ 0.28
VSNL1-204ENST00000451533 ATF5Q9Y2D1 282 aaPredicted RBP16.77■□□□□ 0.28
VSNL1-204ENST00000451533 ZBTB22O15209 634 aa16.7■□□□□ 0.26
VSNL1-204ENST00000451533 ZBTB12Q9Y330 459 aaPredicted RBP16.58■□□□□ 0.24
VSNL1-204ENST00000451533 ZCCHC6Q5VYS8 1495 aaKnown RBP16.58■□□□□ 0.24
VSNL1-204ENST00000451533 ATXN8OSP0DMR3 200 aa16.47■□□□□ 0.23
VSNL1-204ENST00000451533 CHRDL2Q6WN34 429 aa16.4■□□□□ 0.22
VSNL1-204ENST00000451533 OSCARQ8IYS5 282 aa16.37■□□□□ 0.21
VSNL1-204ENST00000451533 AKT1S1Q96B36 256 aa16.37■□□□□ 0.21
VSNL1-204ENST00000451533 DCAF1Q9Y4B6 1507 aa16.3■□□□□ 0.2
VSNL1-204ENST00000451533 REM2Q8IYK8 340 aaPredicted RBP16.22■□□□□ 0.19
VSNL1-204ENST00000451533 SHROOM4Q9ULL8 1493 aa16.19■□□□□ 0.18
VSNL1-204ENST00000451533 FBLN2P98095 1184 aa16.18■□□□□ 0.18
VSNL1-204ENST00000451533 SPDYE2BA6NHP3 402 aa16.05■□□□□ 0.16
VSNL1-204ENST00000451533 SPDYE6P0CI01 402 aa16.05■□□□□ 0.16
VSNL1-204ENST00000451533 SPDYE2Q495Y8 402 aa16.05■□□□□ 0.16
VSNL1-204ENST00000451533 PITPNM1O00562 1244 aa16.03■□□□□ 0.16
VSNL1-204ENST00000451533 MKRN4PQ13434 485 aaPredicted RBP16■□□□□ 0.15
VSNL1-204ENST00000451533 PIP4P2Q8N4L2 257 aa15.99■□□□□ 0.15
VSNL1-204ENST00000451533 CSRNP3Q8WYN3 585 aa15.95■□□□□ 0.14
VSNL1-204ENST00000451533 SUPT5HO00267 1087 aaKnown RBP15.91■□□□□ 0.14
VSNL1-204ENST00000451533 MYO15BQ96JP2 1530 aa15.9■□□□□ 0.14
VSNL1-204ENST00000451533 FXR2P51116 673 aaKnown RBP eCLIP15.89■□□□□ 0.13
VSNL1-204ENST00000451533 ZNF692Q9BU19 519 aaPredicted RBP15.87■□□□□ 0.13
VSNL1-204ENST00000451533 SSUH2Q9Y2M2 353 aa15.8■□□□□ 0.12
VSNL1-204ENST00000451533 DCAF8L2P0C7V8 631 aa15.79■□□□□ 0.12
VSNL1-204ENST00000451533 SPDYE1Q8NFV5 336 aaPredicted RBP15.79■□□□□ 0.12
VSNL1-204ENST00000451533 CLEC11AQ9Y240 323 aa15.79■□□□□ 0.12
VSNL1-204ENST00000451533 EHMT2Q96KQ7 1210 aa15.78■□□□□ 0.12
VSNL1-204ENST00000451533 SP7Q8TDD2 431 aaPredicted RBP15.77■□□□□ 0.12
VSNL1-204ENST00000451533 HAX1O00165 279 aa15.75■□□□□ 0.11
VSNL1-204ENST00000451533 ABCC9O60706 1549 aa15.7■□□□□ 0.1
VSNL1-204ENST00000451533 PRKAR2AP13861 404 aaKnown RBP15.65■□□□□ 0.1
VSNL1-204ENST00000451533 PABPN1Q86U42 306 aaKnown RBP eCLIP15.64■□□□□ 0.09
VSNL1-204ENST00000451533 NACADO15069 1562 aa15.6■□□□□ 0.09
VSNL1-204ENST00000451533 PRR29P0C7W0 189 aa15.51■□□□□ 0.07
VSNL1-204ENST00000451533 SCRIBQ14160 1630 aa15.5■□□□□ 0.07
VSNL1-204ENST00000451533 EVX2Q03828 476 aa15.5■□□□□ 0.07
VSNL1-204ENST00000451533 CHADLQ6NUI6 762 aa15.46■□□□□ 0.07
VSNL1-204ENST00000451533 RB1CC1Q8TDY2 1594 aa15.39■□□□□ 0.05
VSNL1-204ENST00000451533 C19orf67A6NJJ6 358 aa15.38■□□□□ 0.05
VSNL1-204ENST00000451533 RSF1Q96T23 1441 aaPredicted RBP15.33■□□□□ 0.04
VSNL1-204ENST00000451533 SPDYE4A6NLX3 237 aa15.28■□□□□ 0.04
VSNL1-204ENST00000451533 FARP1Q9Y4F1 1045 aaPredicted RBP15.23■□□□□ 0.03
VSNL1-204ENST00000451533 STAG3Q9UJ98 1225 aa15.21■□□□□ 0.03
VSNL1-204ENST00000451533 GABBR2O75899 941 aa15.17■□□□□ 0.02
VSNL1-204ENST00000451533 CD44P16070 742 aaKnown RBP15.16■□□□□ 0.02
VSNL1-204ENST00000451533 BAZ1AQ9NRL2 1556 aaPredicted RBP15.15■□□□□ 0.02
VSNL1-204ENST00000451533 HRCP23327 699 aa15.15■□□□□ 0.02
VSNL1-204ENST00000451533 CREBZFQ9NS37 354 aa15.08■□□□□ 0
VSNL1-204ENST00000451533 MROH2BQ7Z745 1585 aa15.05■□□□□ -0
VSNL1-204ENST00000451533 TRIM41Q8WV44 630 aa15.03■□□□□ -0
VSNL1-204ENST00000451533 WIZO95785 1651 aa15.02□□□□□ -0.01
VSNL1-204ENST00000451533 CECR2Q9BXF3 1484 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms