RNA–Protein interactions for RNA: ENST00000367178.7

SCAF8-201, Transcript of SR-related CTD associated factor 8, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SCAF8, Length 5,057 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-201ENST00000367178 DCAF8L2P0C7V8 631 aa29.23■■■□□ 2.27
SCAF8-201ENST00000367178 NISCHQ9Y2I1 1504 aa28.49■■■□□ 2.15
SCAF8-201ENST00000367178 SUPT5HO00267 1087 aaKnown RBP27.67■■■□□ 2.02
SCAF8-201ENST00000367178 SHROOM4Q9ULL8 1493 aa27.32■■□□□ 1.96
SCAF8-201ENST00000367178 EHMT2Q96KQ7 1210 aa26.59■■□□□ 1.85
SCAF8-201ENST00000367178 APLP2Q06481 763 aa26.09■■□□□ 1.77
SCAF8-201ENST00000367178 FAM9AQ8IZU1 332 aaPredicted RBP26.06■■□□□ 1.76
SCAF8-201ENST00000367178 TRIM41Q8WV44 630 aa25.66■■□□□ 1.7
SCAF8-201ENST00000367178 TTBK1Q5TCY1 1321 aaPredicted RBP25.65■■□□□ 1.7
SCAF8-201ENST00000367178 PCGF6Q9BYE7 350 aa25.54■■□□□ 1.68
SCAF8-201ENST00000367178 RANGAP1P46060 587 aaPredicted RBP25.52■■□□□ 1.68
SCAF8-201ENST00000367178 PELP1Q8IZL8 1130 aaKnown RBP25.33■■□□□ 1.65
SCAF8-201ENST00000367178 UBTFP17480 764 aaKnown RBP25.31■■□□□ 1.64
SCAF8-201ENST00000367178 ATP1B4Q9UN42 357 aaPredicted RBP25.27■■□□□ 1.64
SCAF8-201ENST00000367178 CCER1Q8TC90 406 aaPredicted RBP25.1■■□□□ 1.61
SCAF8-201ENST00000367178 ZEB1P37275 1124 aaPredicted RBP25.04■■□□□ 1.6
SCAF8-201ENST00000367178 PPARGC1BQ86YN6 1023 aaKnown RBP24.78■■□□□ 1.56
SCAF8-201ENST00000367178 CENPBP07199 599 aaPredicted RBP24.74■■□□□ 1.55
SCAF8-201ENST00000367178 CHIC1Q5VXU3 224 aa24.65■■□□□ 1.54
SCAF8-201ENST00000367178 ABCC9O60706 1549 aa24.59■■□□□ 1.53
SCAF8-201ENST00000367178 TRIM26Q12899 539 aaPredicted RBP24.57■■□□□ 1.52
SCAF8-201ENST00000367178 LOC105371045A0A1W2PR82 267 aa24.55■■□□□ 1.52
SCAF8-201ENST00000367178 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.46■■□□□ 1.51
SCAF8-201ENST00000367178 HNRNPUL2Q1KMD3 747 aaKnown RBP24.46■■□□□ 1.51
SCAF8-201ENST00000367178 PABPN1Q86U42 306 aaKnown RBP eCLIP24.44■■□□□ 1.5
SCAF8-201ENST00000367178 ITGAEP38570 1179 aa24.42■■□□□ 1.5
SCAF8-201ENST00000367178 YTHDC1Q96MU7 727 aaKnown RBP24.31■■□□□ 1.48
SCAF8-201ENST00000367178 MYT1LQ9UL68 1186 aa24.28■■□□□ 1.48
SCAF8-201ENST00000367178 NEFLP07196 543 aa24.25■■□□□ 1.47
SCAF8-201ENST00000367178 ERICH6Q7L0X2 663 aa24.2■■□□□ 1.47
SCAF8-201ENST00000367178 HRCP23327 699 aa24.13■■□□□ 1.45
SCAF8-201ENST00000367178 POLR3GLQ9BT43 218 aa24.03■■□□□ 1.44
SCAF8-201ENST00000367178 MYT1Q01538 1121 aa23.99■■□□□ 1.43
SCAF8-201ENST00000367178 FAM50AQ14320 339 aaKnown RBP23.86■■□□□ 1.41
SCAF8-201ENST00000367178 CNGB1Q14028 1251 aaPredicted RBP23.78■■□□□ 1.4
SCAF8-201ENST00000367178 FBLN2P98095 1184 aa23.69■■□□□ 1.38
SCAF8-201ENST00000367178 TRIM52Q96A61 297 aa23.68■■□□□ 1.38
SCAF8-201ENST00000367178 CSRNP3Q8WYN3 585 aa23.6■■□□□ 1.37
SCAF8-201ENST00000367178 SLC4A1APQ9BWU0 796 aaKnown RBP23.58■■□□□ 1.36
SCAF8-201ENST00000367178 SCRIBQ14160 1630 aa23.57■■□□□ 1.36
SCAF8-201ENST00000367178 ZCCHC6Q5VYS8 1495 aaKnown RBP23.56■■□□□ 1.36
SCAF8-201ENST00000367178 DIEXFQ68CQ4 756 aaKnown RBP23.55■■□□□ 1.36
SCAF8-201ENST00000367178 NEUROD1Q13562 356 aa23.54■■□□□ 1.36
SCAF8-201ENST00000367178 P3H3Q8IVL6 736 aa23.48■■□□□ 1.35
SCAF8-201ENST00000367178 DAXXQ9UER7 740 aaPredicted RBP23.4■■□□□ 1.34
SCAF8-201ENST00000367178 ARID3CA6NKF2 412 aa23.37■■□□□ 1.33
SCAF8-201ENST00000367178 ZNF326Q5BKZ1 582 aaKnown RBP23.36■■□□□ 1.33
SCAF8-201ENST00000367178 CCDC180Q9P1Z9 1646 aa23.28■■□□□ 1.32
SCAF8-201ENST00000367178 CDK11AQ9UQ88 783 aaPredicted RBP23.21■■□□□ 1.31
SCAF8-201ENST00000367178 ZNF777Q9ULD5 760 aaPredicted RBP23.19■■□□□ 1.3
SCAF8-201ENST00000367178 ANP32CO43423 234 aa23.18■■□□□ 1.3
SCAF8-201ENST00000367178 ZNF316A6NFI3 1004 aaPredicted RBP23.12■■□□□ 1.29
SCAF8-201ENST00000367178 CLSPNQ9HAW4 1339 aa23.1■■□□□ 1.29
SCAF8-201ENST00000367178 RB1CC1Q8TDY2 1594 aa22.98■■□□□ 1.27
SCAF8-201ENST00000367178 BCANQ96GW7 911 aa22.94■■□□□ 1.26
SCAF8-201ENST00000367178 NPM1P06748 294 aaKnown RBP eCLIP22.87■■□□□ 1.25
SCAF8-201ENST00000367178 DCAF1Q9Y4B6 1507 aa22.86■■□□□ 1.25
SCAF8-201ENST00000367178 GTF3C3Q9Y5Q9 886 aa22.85■■□□□ 1.25
SCAF8-201ENST00000367178 RSF1Q96T23 1441 aaPredicted RBP22.84■■□□□ 1.25
SCAF8-201ENST00000367178 TONSLQ96HA7 1378 aa22.84■■□□□ 1.25
SCAF8-201ENST00000367178 ESF1Q9H501 851 aaKnown RBP22.81■■□□□ 1.24
SCAF8-201ENST00000367178 NEFMP07197 916 aa22.78■■□□□ 1.24
SCAF8-201ENST00000367178 CHMP7Q8WUX9 453 aaPredicted RBP22.78■■□□□ 1.24
SCAF8-201ENST00000367178 CHIC2Q9UKJ5 165 aa22.78■■□□□ 1.24
SCAF8-201ENST00000367178 RTL5Q5HYW3 569 aaPredicted RBP22.77■■□□□ 1.24
SCAF8-201ENST00000367178 NACADO15069 1562 aa22.77■■□□□ 1.24
SCAF8-201ENST00000367178 CHGAP10645 457 aaKnown RBP22.76■■□□□ 1.23
SCAF8-201ENST00000367178 ZBTB47Q9UFB7 747 aaPredicted RBP22.74■■□□□ 1.23
SCAF8-201ENST00000367178 MTUS2Q5JR59 1369 aa22.73■■□□□ 1.23
SCAF8-201ENST00000367178 CLIP1P30622 1438 aa22.73■■□□□ 1.23
SCAF8-201ENST00000367178 CANXP27824 592 aaKnown RBP22.72■■□□□ 1.23
SCAF8-201ENST00000367178 SLC24A1O60721 1099 aa22.71■■□□□ 1.23
SCAF8-201ENST00000367178 STAG3Q9UJ98 1225 aa22.69■■□□□ 1.22
SCAF8-201ENST00000367178 TSPY4P0CV99 314 aa22.69■■□□□ 1.22
SCAF8-201ENST00000367178 TSPY10P0CW01 314 aa22.69■■□□□ 1.22
SCAF8-201ENST00000367178 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.65■■□□□ 1.224e-7■■■□□ 18.1
SCAF8-201ENST00000367178 EEA1Q15075 1411 aa22.64■■□□□ 1.22
SCAF8-201ENST00000367178 BAZ1BQ9UIG0 1483 aaKnown RBP22.64■■□□□ 1.22
SCAF8-201ENST00000367178 WRNQ14191 1432 aaPredicted RBP eCLIP22.62■■□□□ 1.21
SCAF8-201ENST00000367178 DDX10Q13206 875 aaKnown RBP22.59■■□□□ 1.21
SCAF8-201ENST00000367178 ACIN1Q9UKV3 1341 aaKnown RBP22.59■■□□□ 1.21
SCAF8-201ENST00000367178 GOLGA3Q08378 1498 aa22.56■■□□□ 1.2
SCAF8-201ENST00000367178 BCL11AQ9H165 835 aa22.56■■□□□ 1.2
SCAF8-201ENST00000367178 PLPPR3Q6T4P5 718 aa22.55■■□□□ 1.2
SCAF8-201ENST00000367178 CEP162Q5TB80 1403 aa22.51■■□□□ 1.19
SCAF8-201ENST00000367178 KIF27Q86VH2 1401 aa22.48■■□□□ 1.19
SCAF8-201ENST00000367178 HNRNPUQ00839 825 aaKnown RBP eCLIP22.47■■□□□ 1.19
SCAF8-201ENST00000367178 KDM2AQ9Y2K7 1162 aa22.47■■□□□ 1.19
SCAF8-201ENST00000367178 PLEKHD1A6NEE1 506 aa22.46■■□□□ 1.19
SCAF8-201ENST00000367178 RRP7BPQ9NSQ0 103 aa22.46■■□□□ 1.19
SCAF8-201ENST00000367178 FAM9BQ8IZU0 186 aa22.45■■□□□ 1.18
SCAF8-201ENST00000367178 MYO15BQ96JP2 1530 aa22.45■■□□□ 1.18
SCAF8-201ENST00000367178 BAZ1AQ9NRL2 1556 aaPredicted RBP22.44■■□□□ 1.18
SCAF8-201ENST00000367178 KCNH8Q96L42 1107 aa22.44■■□□□ 1.18
SCAF8-201ENST00000367178 CECR2Q9BXF3 1484 aa22.39■■□□□ 1.18
SCAF8-201ENST00000367178 TMC1Q8TDI8 760 aa22.38■■□□□ 1.17
SCAF8-201ENST00000367178 TNIKQ9UKE5 1360 aa22.37■■□□□ 1.17
SCAF8-201ENST00000367178 CEP164Q9UPV0 1460 aa22.36■■□□□ 1.17
SCAF8-201ENST00000367178 SALL2Q9Y467 1007 aaPredicted RBP22.35■■□□□ 1.17
SCAF8-201ENST00000367178 FKBP8Q14318 412 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms