RNA–Protein interactions for RNA: ENST00000511454.5

EXOSC9-210, Transcript of exosome component 9, humanhuman

TSL 5

Gene EXOSC9, Length 733 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-210ENST00000511454 NISCHQ9Y2I1 1504 aa31.01■■■□□ 2.55
EXOSC9-210ENST00000511454 CCDC180Q9P1Z9 1646 aa27.74■■■□□ 2.03
EXOSC9-210ENST00000511454 ABCC9O60706 1549 aa27.67■■■□□ 2.02
EXOSC9-210ENST00000511454 DNAJC5BQ9UF47 199 aa26.43■■□□□ 1.82
EXOSC9-210ENST00000511454 RB1CC1Q8TDY2 1594 aa26.33■■□□□ 1.81
EXOSC9-210ENST00000511454 NACADO15069 1562 aa26.19■■□□□ 1.78
EXOSC9-210ENST00000511454 DCAF8L2P0C7V8 631 aa26.1■■□□□ 1.77
EXOSC9-210ENST00000511454 MYO15BQ96JP2 1530 aa25.86■■□□□ 1.73
EXOSC9-210ENST00000511454 UNC13AQ9UPW8 1703 aa25.8■■□□□ 1.72
EXOSC9-210ENST00000511454 PABPN1Q86U42 306 aaKnown RBP eCLIP25.8■■□□□ 1.72
EXOSC9-210ENST00000511454 ZCCHC6Q5VYS8 1495 aaKnown RBP25.74■■□□□ 1.71
EXOSC9-210ENST00000511454 BICRAQ9NZM4 1560 aa25.65■■□□□ 1.7
EXOSC9-210ENST00000511454 DCAF1Q9Y4B6 1507 aa25.59■■□□□ 1.69
EXOSC9-210ENST00000511454 SCRIBQ14160 1630 aa25.34■■□□□ 1.65
EXOSC9-210ENST00000511454 SHROOM4Q9ULL8 1493 aa25.21■■□□□ 1.63
EXOSC9-210ENST00000511454 CC2D2AQ9P2K1 1620 aa24.99■■□□□ 1.59
EXOSC9-210ENST00000511454 EIF4G1Q04637 1599 aaKnown RBP24.97■■□□□ 1.59
EXOSC9-210ENST00000511454 DNAJC5Q9H3Z4 198 aa24.96■■□□□ 1.59
EXOSC9-210ENST00000511454 CECR2Q9BXF3 1484 aa24.89■■□□□ 1.58
EXOSC9-210ENST00000511454 NCAPD3P42695 1498 aa24.19■■□□□ 1.46
EXOSC9-210ENST00000511454 SMARCA4P51532 1647 aa24.17■■□□□ 1.46
EXOSC9-210ENST00000511454 ATAD2BQ9ULI0 1458 aa24.16■■□□□ 1.46
EXOSC9-210ENST00000511454 SMARCA2P51531 1590 aa24.06■■□□□ 1.44
EXOSC9-210ENST00000511454 BAZ1AQ9NRL2 1556 aaPredicted RBP24.03■■□□□ 1.44
EXOSC9-210ENST00000511454 HMGXB3Q12766 1538 aa24.02■■□□□ 1.44
EXOSC9-210ENST00000511454 MROH2BQ7Z745 1585 aa23.93■■□□□ 1.42
EXOSC9-210ENST00000511454 PEG3Q9GZU2 1588 aa23.91■■□□□ 1.42
EXOSC9-210ENST00000511454 BAZ1BQ9UIG0 1483 aaKnown RBP23.91■■□□□ 1.42
EXOSC9-210ENST00000511454 NESP48681 1621 aa23.84■■□□□ 1.41
EXOSC9-210ENST00000511454 ERCC6Q03468 1493 aa23.83■■□□□ 1.41
EXOSC9-210ENST00000511454 CUX2O14529 1486 aa23.77■■□□□ 1.4
EXOSC9-210ENST00000511454 WIZO95785 1651 aa23.64■■□□□ 1.38
EXOSC9-210ENST00000511454 LAMC3Q9Y6N6 1575 aa23.61■■□□□ 1.37
EXOSC9-210ENST00000511454 THOC2Q8NI27 1593 aaKnown RBP23.54■■□□□ 1.36
EXOSC9-210ENST00000511454 KIF21AQ7Z4S6 1674 aa23.51■■□□□ 1.35
EXOSC9-210ENST00000511454 TRIM41Q8WV44 630 aa23.48■■□□□ 1.35
EXOSC9-210ENST00000511454 RSF1Q96T23 1441 aaPredicted RBP23.47■■□□□ 1.35
EXOSC9-210ENST00000511454 PDS5BQ9NTI5 1447 aa23.46■■□□□ 1.35
EXOSC9-210ENST00000511454 CADPSQ9ULU8 1353 aa23.46■■□□□ 1.35
EXOSC9-210ENST00000511454 TOP2AP11388 1531 aaKnown RBP23.33■■□□□ 1.32
EXOSC9-210ENST00000511454 MRC2Q9UBG0 1479 aa23.28■■□□□ 1.32
EXOSC9-210ENST00000511454 CFTRP13569 1480 aa23.24■■□□□ 1.31
EXOSC9-210ENST00000511454 WDR62O43379 1518 aa23.23■■□□□ 1.31
EXOSC9-210ENST00000511454 FANCD2Q9BXW9 1451 aa23.21■■□□□ 1.31
EXOSC9-210ENST00000511454 CEP164Q9UPV0 1460 aa23.21■■□□□ 1.31
EXOSC9-210ENST00000511454 CCDC88BA6NC98 1476 aa23.08■■□□□ 1.29
EXOSC9-210ENST00000511454 URB2Q14146 1524 aaKnown RBP23.05■■□□□ 1.28
EXOSC9-210ENST00000511454 PRDM2Q13029 1718 aa22.99■■□□□ 1.27
EXOSC9-210ENST00000511454 TOPBP1Q92547 1522 aa22.79■■□□□ 1.24
EXOSC9-210ENST00000511454 ZNF608Q9ULD9 1512 aaPredicted RBP22.75■■□□□ 1.23
EXOSC9-210ENST00000511454 IFT140Q96RY7 1462 aa22.73■■□□□ 1.23
EXOSC9-210ENST00000511454 DNMBPQ6XZF7 1577 aa22.71■■□□□ 1.23
EXOSC9-210ENST00000511454 ABCC8Q09428 1581 aa22.67■■□□□ 1.22
EXOSC9-210ENST00000511454 OSCARQ8IYS5 282 aa22.67■■□□□ 1.22
EXOSC9-210ENST00000511454 EIF4G3O43432 1585 aaKnown RBP22.6■■□□□ 1.21
EXOSC9-210ENST00000511454 TARBP1Q13395 1621 aaKnown RBP22.59■■□□□ 1.21
EXOSC9-210ENST00000511454 POLA1P09884 1462 aaPredicted RBP22.58■■□□□ 1.2
EXOSC9-210ENST00000511454 AQRO60306 1485 aaKnown RBP eCLIP22.54■■□□□ 1.26e-6■■■■□ 25.1
EXOSC9-210ENST00000511454 SUPT5HO00267 1087 aaKnown RBP22.52■■□□□ 1.2
EXOSC9-210ENST00000511454 RAD54L2Q9Y4B4 1467 aa22.51■■□□□ 1.19
EXOSC9-210ENST00000511454 CUX1P39880 1505 aa22.47■■□□□ 1.19
EXOSC9-210ENST00000511454 FGD5Q6ZNL6 1462 aa22.46■■□□□ 1.19
EXOSC9-210ENST00000511454 SOGA1O94964 1423 aa22.45■■□□□ 1.18
EXOSC9-210ENST00000511454 RIMBP3CA6NJZ7 1639 aa22.43■■□□□ 1.18
EXOSC9-210ENST00000511454 RIMBP3BA6NNM3 1639 aa22.43■■□□□ 1.18
EXOSC9-210ENST00000511454 RIMBP3Q9UFD9 1639 aa22.43■■□□□ 1.18
EXOSC9-210ENST00000511454 TDRD9Q8NDG6 1382 aaKnown RBP22.42■■□□□ 1.18
EXOSC9-210ENST00000511454 CHD1O14646 1710 aa22.41■■□□□ 1.18
EXOSC9-210ENST00000511454 ARHGEF11O15085 1522 aa22.36■■□□□ 1.17
EXOSC9-210ENST00000511454 FBLN2P98095 1184 aa22.33■■□□□ 1.17
EXOSC9-210ENST00000511454 SNAPC4Q5SXM2 1469 aa22.3■■□□□ 1.16
EXOSC9-210ENST00000511454 WDR97A6NE52 1622 aa22.29■■□□□ 1.16
EXOSC9-210ENST00000511454 AEBP2Q6ZN18 517 aaPredicted RBP22.27■■□□□ 1.16
EXOSC9-210ENST00000511454 GRIN2BQ13224 1484 aa22.23■■□□□ 1.15
EXOSC9-210ENST00000511454 MAGI1Q96QZ7 1491 aaPredicted RBP22.22■■□□□ 1.15
EXOSC9-210ENST00000511454 ABCA10Q8WWZ4 1543 aa22.18■■□□□ 1.14
EXOSC9-210ENST00000511454 GAPVD1Q14C86 1478 aa22.18■■□□□ 1.14
EXOSC9-210ENST00000511454 PBRM1Q86U86 1689 aa22.17■■□□□ 1.14
EXOSC9-210ENST00000511454 TRHP20396 242 aaPredicted RBP22.17■■□□□ 1.14
EXOSC9-210ENST00000511454 CYB5RLQ6IPT4 315 aa22.17■■□□□ 1.14
EXOSC9-210ENST00000511454 CHMP7Q8WUX9 453 aaPredicted RBP22.17■■□□□ 1.14
EXOSC9-210ENST00000511454 CLASP1Q7Z460 1538 aa22.16■■□□□ 1.14
EXOSC9-210ENST00000511454 ARAP1Q96P48 1450 aa22.16■■□□□ 1.14
EXOSC9-210ENST00000511454 ABCA5Q8WWZ7 1642 aa22.16■■□□□ 1.14
EXOSC9-210ENST00000511454 SYNJ2O15056 1496 aa22.15■■□□□ 1.14
EXOSC9-210ENST00000511454 SYNJ1O43426 1573 aa22.13■■□□□ 1.13
EXOSC9-210ENST00000511454 TOP2BQ02880 1626 aa22.11■■□□□ 1.13
EXOSC9-210ENST00000511454 BIVM-ERCC5R4GMW8 1640 aa22.11■■□□□ 1.13
EXOSC9-210ENST00000511454 WRNQ14191 1432 aaPredicted RBP eCLIP22.11■■□□□ 1.13
EXOSC9-210ENST00000511454 ADAMTS12P58397 1594 aa21.98■■□□□ 1.11
EXOSC9-210ENST00000511454 GRIN2AQ12879 1464 aa21.97■■□□□ 1.11
EXOSC9-210ENST00000511454 CEP170Q5SW79 1584 aa21.91■■□□□ 1.1
EXOSC9-210ENST00000511454 ERICH3Q5RHP9 1530 aa21.9■■□□□ 1.1
EXOSC9-210ENST00000511454 FHAD1B1AJZ9 1412 aa21.89■■□□□ 1.1
EXOSC9-210ENST00000511454 NUP160Q12769 1436 aa21.89■■□□□ 1.1
EXOSC9-210ENST00000511454 ERCC6L2Q5T890 1561 aa21.87■■□□□ 1.09
EXOSC9-210ENST00000511454 SHROOM2Q13796 1616 aa21.78■■□□□ 1.08
EXOSC9-210ENST00000511454 IGF1RP08069 1367 aa21.68■■□□□ 1.06
EXOSC9-210ENST00000511454 RUSC2Q8N2Y8 1516 aa21.67■■□□□ 1.06
EXOSC9-210ENST00000511454 PRG4Q92954 1404 aaPredicted RBP21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms