RNA–Protein interactions for RNA: ENST00000458520.5

RETREG2-208, Transcript of reticulophagy regulator family member 2, humanhuman

TSL 3

Gene RETREG2, Length 992 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2-208ENST00000458520 NISCHQ9Y2I1 1504 aa30.43■■■□□ 2.46
RETREG2-208ENST00000458520 ABCC9O60706 1549 aa28.41■■■□□ 2.14
RETREG2-208ENST00000458520 CCDC180Q9P1Z9 1646 aa27.62■■■□□ 2.01
RETREG2-208ENST00000458520 DNAJC5BQ9UF47 199 aa27.38■■□□□ 1.97
RETREG2-208ENST00000458520 RB1CC1Q8TDY2 1594 aa26.69■■□□□ 1.86
RETREG2-208ENST00000458520 PABPN1Q86U42 306 aaKnown RBP eCLIP26.33■■□□□ 1.81
RETREG2-208ENST00000458520 NACADO15069 1562 aa26.33■■□□□ 1.8
RETREG2-208ENST00000458520 UNC13AQ9UPW8 1703 aa26■■□□□ 1.75
RETREG2-208ENST00000458520 BICRAQ9NZM4 1560 aa25.96■■□□□ 1.75
RETREG2-208ENST00000458520 DCAF8L2P0C7V8 631 aa25.96■■□□□ 1.75
RETREG2-208ENST00000458520 MYO15BQ96JP2 1530 aa25.75■■□□□ 1.71
RETREG2-208ENST00000458520 DNAJC5Q9H3Z4 198 aa25.73■■□□□ 1.71
RETREG2-208ENST00000458520 CECR2Q9BXF3 1484 aa25.7■■□□□ 1.7
RETREG2-208ENST00000458520 CC2D2AQ9P2K1 1620 aa25.61■■□□□ 1.69
RETREG2-208ENST00000458520 SHROOM4Q9ULL8 1493 aa25.58■■□□□ 1.69
RETREG2-208ENST00000458520 EIF4G1Q04637 1599 aaKnown RBP25.39■■□□□ 1.65
RETREG2-208ENST00000458520 DCAF1Q9Y4B6 1507 aa25.12■■□□□ 1.61
RETREG2-208ENST00000458520 SCRIBQ14160 1630 aa25.11■■□□□ 1.61
RETREG2-208ENST00000458520 ZCCHC6Q5VYS8 1495 aaKnown RBP25.07■■□□□ 1.6
RETREG2-208ENST00000458520 CUX2O14529 1486 aa24.84■■□□□ 1.57
RETREG2-208ENST00000458520 ERCC6Q03468 1493 aa24.58■■□□□ 1.53
RETREG2-208ENST00000458520 NCAPD3P42695 1498 aa24.35■■□□□ 1.49
RETREG2-208ENST00000458520 TRIM41Q8WV44 630 aa24.22■■□□□ 1.47
RETREG2-208ENST00000458520 NESP48681 1621 aa24.18■■□□□ 1.46
RETREG2-208ENST00000458520 ATAD2BQ9ULI0 1458 aa24.15■■□□□ 1.46
RETREG2-208ENST00000458520 THOC2Q8NI27 1593 aaKnown RBP24.1■■□□□ 1.45
RETREG2-208ENST00000458520 HMGXB3Q12766 1538 aa24.08■■□□□ 1.45
RETREG2-208ENST00000458520 SMARCA2P51531 1590 aa24.02■■□□□ 1.44
RETREG2-208ENST00000458520 SMARCA4P51532 1647 aa23.89■■□□□ 1.42
RETREG2-208ENST00000458520 LAMC3Q9Y6N6 1575 aa23.88■■□□□ 1.41
RETREG2-208ENST00000458520 BAZ1BQ9UIG0 1483 aaKnown RBP23.85■■□□□ 1.41
RETREG2-208ENST00000458520 PDS5BQ9NTI5 1447 aa23.8■■□□□ 1.4
RETREG2-208ENST00000458520 KIF21AQ7Z4S6 1674 aa23.79■■□□□ 1.4
RETREG2-208ENST00000458520 PEG3Q9GZU2 1588 aa23.7■■□□□ 1.38
RETREG2-208ENST00000458520 BAZ1AQ9NRL2 1556 aaPredicted RBP23.67■■□□□ 1.38
RETREG2-208ENST00000458520 MRC2Q9UBG0 1479 aa23.64■■□□□ 1.38
RETREG2-208ENST00000458520 WDR62O43379 1518 aa23.61■■□□□ 1.37
RETREG2-208ENST00000458520 CADPSQ9ULU8 1353 aa23.56■■□□□ 1.36
RETREG2-208ENST00000458520 OSCARQ8IYS5 282 aa23.56■■□□□ 1.36
RETREG2-208ENST00000458520 MROH2BQ7Z745 1585 aa23.44■■□□□ 1.34
RETREG2-208ENST00000458520 CEP164Q9UPV0 1460 aa23.37■■□□□ 1.33
RETREG2-208ENST00000458520 RIMBP3CA6NJZ7 1639 aa23.3■■□□□ 1.32
RETREG2-208ENST00000458520 RIMBP3BA6NNM3 1639 aa23.3■■□□□ 1.32
RETREG2-208ENST00000458520 RIMBP3Q9UFD9 1639 aa23.3■■□□□ 1.32
RETREG2-208ENST00000458520 FANCD2Q9BXW9 1451 aa23.29■■□□□ 1.32
RETREG2-208ENST00000458520 ARHGEF11O15085 1522 aa23.19■■□□□ 1.3
RETREG2-208ENST00000458520 URB2Q14146 1524 aaKnown RBP23.15■■□□□ 1.3
RETREG2-208ENST00000458520 CFTRP13569 1480 aa23.13■■□□□ 1.29
RETREG2-208ENST00000458520 WIZO95785 1651 aa23.06■■□□□ 1.28
RETREG2-208ENST00000458520 CYB5RLQ6IPT4 315 aa23.04■■□□□ 1.28
RETREG2-208ENST00000458520 TRHP20396 242 aaPredicted RBP23.03■■□□□ 1.28
RETREG2-208ENST00000458520 ZNF608Q9ULD9 1512 aaPredicted RBP22.98■■□□□ 1.27
RETREG2-208ENST00000458520 IFT140Q96RY7 1462 aa22.95■■□□□ 1.26
RETREG2-208ENST00000458520 AEBP2Q6ZN18 517 aaPredicted RBP22.93■■□□□ 1.26
RETREG2-208ENST00000458520 ARAP1Q96P48 1450 aa22.92■■□□□ 1.26
RETREG2-208ENST00000458520 RSF1Q96T23 1441 aaPredicted RBP22.81■■□□□ 1.24
RETREG2-208ENST00000458520 EIF4G3O43432 1585 aaKnown RBP22.79■■□□□ 1.24
RETREG2-208ENST00000458520 TOP2AP11388 1531 aaKnown RBP22.77■■□□□ 1.24
RETREG2-208ENST00000458520 TOPBP1Q92547 1522 aa22.75■■□□□ 1.23
RETREG2-208ENST00000458520 CHD1O14646 1710 aa22.72■■□□□ 1.23
RETREG2-208ENST00000458520 PRDM2Q13029 1718 aa22.71■■□□□ 1.23
RETREG2-208ENST00000458520 AQRO60306 1485 aaKnown RBP eCLIP22.67■■□□□ 1.229e-7■■■■■ 32.2
RETREG2-208ENST00000458520 FBLN2P98095 1184 aa22.65■■□□□ 1.22
RETREG2-208ENST00000458520 ABCC8Q09428 1581 aa22.64■■□□□ 1.22
RETREG2-208ENST00000458520 TARBP1Q13395 1621 aaKnown RBP22.6■■□□□ 1.21
RETREG2-208ENST00000458520 DNMBPQ6XZF7 1577 aa22.59■■□□□ 1.21
RETREG2-208ENST00000458520 CLASP1Q7Z460 1538 aa22.52■■□□□ 1.2
RETREG2-208ENST00000458520 CCDC88BA6NC98 1476 aa22.52■■□□□ 1.2
RETREG2-208ENST00000458520 POLA1P09884 1462 aaPredicted RBP22.47■■□□□ 1.19
RETREG2-208ENST00000458520 SNAPC4Q5SXM2 1469 aa22.41■■□□□ 1.18
RETREG2-208ENST00000458520 TDRD9Q8NDG6 1382 aaKnown RBP22.41■■□□□ 1.18
RETREG2-208ENST00000458520 SYNJ1O43426 1573 aa22.41■■□□□ 1.18
RETREG2-208ENST00000458520 RAD54L2Q9Y4B4 1467 aa22.4■■□□□ 1.18
RETREG2-208ENST00000458520 CHMP7Q8WUX9 453 aaPredicted RBP22.38■■□□□ 1.17
RETREG2-208ENST00000458520 GAPVD1Q14C86 1478 aa22.34■■□□□ 1.17
RETREG2-208ENST00000458520 SOGA1O94964 1423 aa22.34■■□□□ 1.17
RETREG2-208ENST00000458520 MAGI1Q96QZ7 1491 aaPredicted RBP22.34■■□□□ 1.17
RETREG2-208ENST00000458520 WDR97A6NE52 1622 aa22.32■■□□□ 1.16
RETREG2-208ENST00000458520 SYNJ2O15056 1496 aa22.28■■□□□ 1.16
RETREG2-208ENST00000458520 GRIN2BQ13224 1484 aa22.26■■□□□ 1.15
RETREG2-208ENST00000458520 FGD5Q6ZNL6 1462 aa22.21■■□□□ 1.15
RETREG2-208ENST00000458520 ERCC6L2Q5T890 1561 aa22.09■■□□□ 1.13
RETREG2-208ENST00000458520 ILDR1Q86SU0 546 aaPredicted RBP22.07■■□□□ 1.12
RETREG2-208ENST00000458520 CUX1P39880 1505 aa22.06■■□□□ 1.12
RETREG2-208ENST00000458520 PBRM1Q86U86 1689 aa22.03■■□□□ 1.12
RETREG2-208ENST00000458520 KIF13AQ9H1H9 1805 aa21.99■■□□□ 1.11
RETREG2-208ENST00000458520 CEP170Q5SW79 1584 aa21.99■■□□□ 1.11
RETREG2-208ENST00000458520 GRIN2AQ12879 1464 aa21.96■■□□□ 1.11
RETREG2-208ENST00000458520 NUP160Q12769 1436 aa21.95■■□□□ 1.1
RETREG2-208ENST00000458520 ABCA5Q8WWZ7 1642 aa21.95■■□□□ 1.1
RETREG2-208ENST00000458520 KDM4FA0A1W2PPD8 638 aa21.94■■□□□ 1.1
RETREG2-208ENST00000458520 ABCA10Q8WWZ4 1543 aa21.93■■□□□ 1.1
RETREG2-208ENST00000458520 SHROOM2Q13796 1616 aa21.9■■□□□ 1.1
RETREG2-208ENST00000458520 ABCC10Q5T3U5 1492 aa21.86■■□□□ 1.09
RETREG2-208ENST00000458520 FAM69CQ0P6D2 419 aa21.85■■□□□ 1.09
RETREG2-208ENST00000458520 ADAMTS12P58397 1594 aa21.84■■□□□ 1.09
RETREG2-208ENST00000458520 PRG4Q92954 1404 aaPredicted RBP21.78■■□□□ 1.08
RETREG2-208ENST00000458520 MAPKBP1O60336 1514 aa21.77■■□□□ 1.08
RETREG2-208ENST00000458520 FHAD1B1AJZ9 1412 aa21.77■■□□□ 1.08
RETREG2-208ENST00000458520 DIP2BQ9P265 1576 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms