RNA–Protein interactions for RNA: ENST00000529907.5

PPP6R3-219, Transcript of protein phosphatase 6 regulatory subunit 3, humanhuman

TSL 5

Gene PPP6R3, Length 826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP6R3-219ENST00000529907 NISCHQ9Y2I1 1504 aa24.33■■□□□ 1.49
PPP6R3-219ENST00000529907 CCDC180Q9P1Z9 1646 aa21.62■■□□□ 1.05
PPP6R3-219ENST00000529907 ABCC9O60706 1549 aa21.19■□□□□ 0.98
PPP6R3-219ENST00000529907 RB1CC1Q8TDY2 1594 aa20.34■□□□□ 0.85
PPP6R3-219ENST00000529907 NACADO15069 1562 aa20.33■□□□□ 0.84
PPP6R3-219ENST00000529907 ZCCHC6Q5VYS8 1495 aaKnown RBP20.24■□□□□ 0.83
PPP6R3-219ENST00000529907 MYO15BQ96JP2 1530 aa20.23■□□□□ 0.83
PPP6R3-219ENST00000529907 DCAF8L2P0C7V8 631 aa20.23■□□□□ 0.83
PPP6R3-219ENST00000529907 DCAF1Q9Y4B6 1507 aa20.13■□□□□ 0.81
PPP6R3-219ENST00000529907 UNC13AQ9UPW8 1703 aa19.99■□□□□ 0.79
PPP6R3-219ENST00000529907 BICRAQ9NZM4 1560 aa19.85■□□□□ 0.77
PPP6R3-219ENST00000529907 PABPN1Q86U42 306 aaKnown RBP eCLIP19.8■□□□□ 0.76
PPP6R3-219ENST00000529907 SCRIBQ14160 1630 aa19.69■□□□□ 0.74
PPP6R3-219ENST00000529907 DNAJC5BQ9UF47 199 aa19.63■□□□□ 0.73
PPP6R3-219ENST00000529907 SHROOM4Q9ULL8 1493 aa19.5■□□□□ 0.71
PPP6R3-219ENST00000529907 EIF4G1Q04637 1599 aaKnown RBP19.25■□□□□ 0.67
PPP6R3-219ENST00000529907 CC2D2AQ9P2K1 1620 aa19.19■□□□□ 0.66
PPP6R3-219ENST00000529907 CECR2Q9BXF3 1484 aa19.03■□□□□ 0.64
PPP6R3-219ENST00000529907 SMARCA4P51532 1647 aa18.87■□□□□ 0.61
PPP6R3-219ENST00000529907 BAZ1AQ9NRL2 1556 aaPredicted RBP18.81■□□□□ 0.6
PPP6R3-219ENST00000529907 NCAPD3P42695 1498 aa18.8■□□□□ 0.6
PPP6R3-219ENST00000529907 ATAD2BQ9ULI0 1458 aa18.79■□□□□ 0.6
PPP6R3-219ENST00000529907 MROH2BQ7Z745 1585 aa18.77■□□□□ 0.6
PPP6R3-219ENST00000529907 PEG3Q9GZU2 1588 aa18.72■□□□□ 0.59
PPP6R3-219ENST00000529907 SMARCA2P51531 1590 aa18.71■□□□□ 0.59
PPP6R3-219ENST00000529907 HMGXB3Q12766 1538 aa18.66■□□□□ 0.58
PPP6R3-219ENST00000529907 BAZ1BQ9UIG0 1483 aaKnown RBP18.57■□□□□ 0.56
PPP6R3-219ENST00000529907 WIZO95785 1651 aa18.56■□□□□ 0.56
PPP6R3-219ENST00000529907 RSF1Q96T23 1441 aaPredicted RBP18.53■□□□□ 0.56
PPP6R3-219ENST00000529907 NESP48681 1621 aa18.37■□□□□ 0.53
PPP6R3-219ENST00000529907 TOP2AP11388 1531 aaKnown RBP18.31■□□□□ 0.52
PPP6R3-219ENST00000529907 LAMC3Q9Y6N6 1575 aa18.26■□□□□ 0.51
PPP6R3-219ENST00000529907 CADPSQ9ULU8 1353 aa18.21■□□□□ 0.51
PPP6R3-219ENST00000529907 ERCC6Q03468 1493 aa18.17■□□□□ 0.5
PPP6R3-219ENST00000529907 KIF21AQ7Z4S6 1674 aa18.14■□□□□ 0.49
PPP6R3-219ENST00000529907 CCDC88BA6NC98 1476 aa18.14■□□□□ 0.49
PPP6R3-219ENST00000529907 CFTRP13569 1480 aa18.13■□□□□ 0.49
PPP6R3-219ENST00000529907 PDS5BQ9NTI5 1447 aa18.1■□□□□ 0.49
PPP6R3-219ENST00000529907 THOC2Q8NI27 1593 aaKnown RBP18.09■□□□□ 0.49
PPP6R3-219ENST00000529907 CUX2O14529 1486 aa18.06■□□□□ 0.48
PPP6R3-219ENST00000529907 FANCD2Q9BXW9 1451 aa17.99■□□□□ 0.47
PPP6R3-219ENST00000529907 PRDM2Q13029 1718 aa17.95■□□□□ 0.46
PPP6R3-219ENST00000529907 MRC2Q9UBG0 1479 aa17.94■□□□□ 0.46
PPP6R3-219ENST00000529907 CEP164Q9UPV0 1460 aa17.94■□□□□ 0.46
PPP6R3-219ENST00000529907 SUPT5HO00267 1087 aaKnown RBP17.93■□□□□ 0.46
PPP6R3-219ENST00000529907 WDR62O43379 1518 aa17.92■□□□□ 0.46
PPP6R3-219ENST00000529907 URB2Q14146 1524 aaKnown RBP17.87■□□□□ 0.45
PPP6R3-219ENST00000529907 TOPBP1Q92547 1522 aa17.72■□□□□ 0.43
PPP6R3-219ENST00000529907 DNMBPQ6XZF7 1577 aa17.67■□□□□ 0.42
PPP6R3-219ENST00000529907 ABCC8Q09428 1581 aa17.66■□□□□ 0.42
PPP6R3-219ENST00000529907 DNAJC5Q9H3Z4 198 aa17.63■□□□□ 0.41
PPP6R3-219ENST00000529907 CUX1P39880 1505 aa17.6■□□□□ 0.41
PPP6R3-219ENST00000529907 IFT140Q96RY7 1462 aa17.58■□□□□ 0.41
PPP6R3-219ENST00000529907 TARBP1Q13395 1621 aaKnown RBP17.58■□□□□ 0.4
PPP6R3-219ENST00000529907 ZNF608Q9ULD9 1512 aaPredicted RBP17.57■□□□□ 0.4
PPP6R3-219ENST00000529907 POLA1P09884 1462 aaPredicted RBP17.56■□□□□ 0.4
PPP6R3-219ENST00000529907 FGD5Q6ZNL6 1462 aa17.5■□□□□ 0.39
PPP6R3-219ENST00000529907 RAD54L2Q9Y4B4 1467 aa17.5■□□□□ 0.39
PPP6R3-219ENST00000529907 SOGA1O94964 1423 aa17.47■□□□□ 0.39
PPP6R3-219ENST00000529907 EIF4G3O43432 1585 aaKnown RBP17.46■□□□□ 0.39
PPP6R3-219ENST00000529907 AQRO60306 1485 aaKnown RBP eCLIP17.45■□□□□ 0.381e-6■□□□□ 11.2
PPP6R3-219ENST00000529907 BIVM-ERCC5R4GMW8 1640 aa17.43■□□□□ 0.38
PPP6R3-219ENST00000529907 SYNJ1O43426 1573 aa17.42■□□□□ 0.38
PPP6R3-219ENST00000529907 WDR97A6NE52 1622 aa17.41■□□□□ 0.38
PPP6R3-219ENST00000529907 TOP2BQ02880 1626 aa17.41■□□□□ 0.38
PPP6R3-219ENST00000529907 WRNQ14191 1432 aaPredicted RBP eCLIP17.4■□□□□ 0.38
PPP6R3-219ENST00000529907 TDRD9Q8NDG6 1382 aaKnown RBP17.4■□□□□ 0.38
PPP6R3-219ENST00000529907 ABCA10Q8WWZ4 1543 aa17.34■□□□□ 0.37
PPP6R3-219ENST00000529907 OSCARQ8IYS5 282 aa17.31■□□□□ 0.36
PPP6R3-219ENST00000529907 ABCA5Q8WWZ7 1642 aa17.29■□□□□ 0.36
PPP6R3-219ENST00000529907 CHD1O14646 1710 aa17.27■□□□□ 0.35
PPP6R3-219ENST00000529907 GRIN2BQ13224 1484 aa17.26■□□□□ 0.35
PPP6R3-219ENST00000529907 GAPVD1Q14C86 1478 aa17.26■□□□□ 0.35
PPP6R3-219ENST00000529907 SNAPC4Q5SXM2 1469 aa17.24■□□□□ 0.35
PPP6R3-219ENST00000529907 PBRM1Q86U86 1689 aa17.24■□□□□ 0.35
PPP6R3-219ENST00000529907 MAGI1Q96QZ7 1491 aaPredicted RBP17.21■□□□□ 0.35
PPP6R3-219ENST00000529907 SYNJ2O15056 1496 aa17.16■□□□□ 0.34
PPP6R3-219ENST00000529907 FBLN2P98095 1184 aa17.14■□□□□ 0.33
PPP6R3-219ENST00000529907 ERICH3Q5RHP9 1530 aa17.11■□□□□ 0.33
PPP6R3-219ENST00000529907 CHMP7Q8WUX9 453 aaPredicted RBP17.11■□□□□ 0.33
PPP6R3-219ENST00000529907 CLASP1Q7Z460 1538 aa17.1■□□□□ 0.33
PPP6R3-219ENST00000529907 ADAMTS12P58397 1594 aa17.1■□□□□ 0.33
PPP6R3-219ENST00000529907 RIMBP3CA6NJZ7 1639 aa17.07■□□□□ 0.32
PPP6R3-219ENST00000529907 RIMBP3BA6NNM3 1639 aa17.07■□□□□ 0.32
PPP6R3-219ENST00000529907 RIMBP3Q9UFD9 1639 aa17.07■□□□□ 0.32
PPP6R3-219ENST00000529907 GRIN2AQ12879 1464 aa17.05■□□□□ 0.32
PPP6R3-219ENST00000529907 FHAD1B1AJZ9 1412 aa17.05■□□□□ 0.32
PPP6R3-219ENST00000529907 IGF1RP08069 1367 aa17.05■□□□□ 0.32
PPP6R3-219ENST00000529907 ARHGEF11O15085 1522 aa17.05■□□□□ 0.32
PPP6R3-219ENST00000529907 KIF27Q86VH2 1401 aa17.02■□□□□ 0.31
PPP6R3-219ENST00000529907 NUP160Q12769 1436 aa17.01■□□□□ 0.31
PPP6R3-219ENST00000529907 CEP170Q5SW79 1584 aa17.01■□□□□ 0.31
PPP6R3-219ENST00000529907 RUSC2Q8N2Y8 1516 aa16.98■□□□□ 0.31
PPP6R3-219ENST00000529907 ARAP1Q96P48 1450 aa16.93■□□□□ 0.3
PPP6R3-219ENST00000529907 CUL7Q14999 1698 aa16.92■□□□□ 0.3
PPP6R3-219ENST00000529907 TRIM41Q8WV44 630 aa16.92■□□□□ 0.3
PPP6R3-219ENST00000529907 SHROOM2Q13796 1616 aa16.91■□□□□ 0.3
PPP6R3-219ENST00000529907 ERCC6L2Q5T890 1561 aa16.89■□□□□ 0.3
PPP6R3-219ENST00000529907 CARMIL1Q5VZK9 1371 aa16.89■□□□□ 0.29
PPP6R3-219ENST00000529907 CYB5RLQ6IPT4 315 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms