RNA–Protein interactions for RNA: ENST00000243498.9

EXOSC9-201, Transcript of exosome component 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC9, Length 1,481 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-201ENST00000243498 AEBP2Q6ZN18 517 aaPredicted RBP25.88■■□□□ 1.73
EXOSC9-201ENST00000243498 CHIC1Q5VXU3 224 aa24.73■■□□□ 1.55
EXOSC9-201ENST00000243498 SENP3Q9H4L4 574 aaPredicted RBP22.18■■□□□ 1.14
EXOSC9-201ENST00000243498 PHF23Q9BUL5 403 aaPredicted RBP21.83■■□□□ 1.09
EXOSC9-201ENST00000243498 NISCHQ9Y2I1 1504 aa20.85■□□□□ 0.93
EXOSC9-201ENST00000243498 FOXD1Q16676 465 aa20.58■□□□□ 0.89
EXOSC9-201ENST00000243498 PLPPR3Q6T4P5 718 aa19.85■□□□□ 0.77
EXOSC9-201ENST00000243498 MSH5O43196 834 aa19.33■□□□□ 0.68
EXOSC9-201ENST00000243498 PIAS4Q8N2W9 510 aaPredicted RBP19.3■□□□□ 0.68
EXOSC9-201ENST00000243498 PPP6R1Q9UPN7 881 aa19.27■□□□□ 0.67
EXOSC9-201ENST00000243498 ADRA2BP18089 450 aa19.22■□□□□ 0.67
EXOSC9-201ENST00000243498 POTEDQ86YR6 584 aa18.63■□□□□ 0.57
EXOSC9-201ENST00000243498 CCDC180Q9P1Z9 1646 aa18.36■□□□□ 0.53
EXOSC9-201ENST00000243498 SCAF1Q9H7N4 1312 aaKnown RBP17.73■□□□□ 0.43
EXOSC9-201ENST00000243498 MAPK8IP2Q13387 824 aaPredicted RBP17.61■□□□□ 0.41
EXOSC9-201ENST00000243498 DMRT2Q9Y5R5 561 aa17.57■□□□□ 0.4
EXOSC9-201ENST00000243498 ZCCHC6Q5VYS8 1495 aaKnown RBP17.46■□□□□ 0.39
EXOSC9-201ENST00000243498 ABCC9O60706 1549 aa17.4■□□□□ 0.38
EXOSC9-201ENST00000243498 PPP4R3CPQ6ZMV5 832 aa17.36■□□□□ 0.37
EXOSC9-201ENST00000243498 DCAF1Q9Y4B6 1507 aa17.31■□□□□ 0.36
EXOSC9-201ENST00000243498 DCAF8L2P0C7V8 631 aa17.29■□□□□ 0.36
EXOSC9-201ENST00000243498 MYO15BQ96JP2 1530 aa17.2■□□□□ 0.34
EXOSC9-201ENST00000243498 NACADO15069 1562 aa17.14■□□□□ 0.34
EXOSC9-201ENST00000243498 CNKSR2Q8WXI2 1034 aa17.05■□□□□ 0.32
EXOSC9-201ENST00000243498 RB1CC1Q8TDY2 1594 aa17.04■□□□□ 0.32
EXOSC9-201ENST00000243498 HOXD11P31277 338 aaPredicted RBP16.96■□□□□ 0.31
EXOSC9-201ENST00000243498 RNF216Q9NWF9 866 aaPredicted RBP16.87■□□□□ 0.29
EXOSC9-201ENST00000243498 DCAF8L1A6NGE4 600 aa16.86■□□□□ 0.29
EXOSC9-201ENST00000243498 NCBP3Q53F19 620 aaKnown RBP16.8■□□□□ 0.28
EXOSC9-201ENST00000243498 SHROOM4Q9ULL8 1493 aa16.77■□□□□ 0.27
EXOSC9-201ENST00000243498 SCRIBQ14160 1630 aa16.73■□□□□ 0.27
EXOSC9-201ENST00000243498 UNC13AQ9UPW8 1703 aa16.6■□□□□ 0.25
EXOSC9-201ENST00000243498 CACNB1Q02641 598 aaPredicted RBP16.49■□□□□ 0.23
EXOSC9-201ENST00000243498 NPM3O75607 178 aaKnown RBP16.47■□□□□ 0.23
EXOSC9-201ENST00000243498 RNF39Q9H2S5 420 aa16.45■□□□□ 0.22
EXOSC9-201ENST00000243498 DNAJC5BQ9UF47 199 aa16.42■□□□□ 0.22
EXOSC9-201ENST00000243498 BICRAQ9NZM4 1560 aa16.4■□□□□ 0.22
EXOSC9-201ENST00000243498 PABPN1Q86U42 306 aaKnown RBP eCLIP16.34■□□□□ 0.21
EXOSC9-201ENST00000243498 C1QBPQ07021 282 aaKnown RBP16.25■□□□□ 0.19
EXOSC9-201ENST00000243498 KCNA4P22459 653 aa16.22■□□□□ 0.19
EXOSC9-201ENST00000243498 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.18■□□□□ 0.185e-7■■■□□ 14.7
EXOSC9-201ENST00000243498 BAZ1AQ9NRL2 1556 aaPredicted RBP16.17■□□□□ 0.18
EXOSC9-201ENST00000243498 CECR2Q9BXF3 1484 aa16.13■□□□□ 0.17
EXOSC9-201ENST00000243498 SUPT5HO00267 1087 aaKnown RBP16.1■□□□□ 0.17
EXOSC9-201ENST00000243498 SMARCA4P51532 1647 aa16.07■□□□□ 0.16
EXOSC9-201ENST00000243498 RSF1Q96T23 1441 aaPredicted RBP16.06■□□□□ 0.16
EXOSC9-201ENST00000243498 MROH2BQ7Z745 1585 aa16.05■□□□□ 0.16
EXOSC9-201ENST00000243498 EIF4G1Q04637 1599 aaKnown RBP15.97■□□□□ 0.15
EXOSC9-201ENST00000243498 WIZO95785 1651 aa15.92■□□□□ 0.14
EXOSC9-201ENST00000243498 PEG3Q9GZU2 1588 aa15.91■□□□□ 0.14
EXOSC9-201ENST00000243498 SMARCA2P51531 1590 aa15.91■□□□□ 0.14
EXOSC9-201ENST00000243498 ATAD2BQ9ULI0 1458 aa15.85■□□□□ 0.13
EXOSC9-201ENST00000243498 U3KPZ7 1027 aaPredicted RBP15.81■□□□□ 0.12
EXOSC9-201ENST00000243498 TOP2AP11388 1531 aaKnown RBP15.81■□□□□ 0.12
EXOSC9-201ENST00000243498 BAZ1BQ9UIG0 1483 aaKnown RBP15.78■□□□□ 0.12
EXOSC9-201ENST00000243498 CC2D2AQ9P2K1 1620 aa15.78■□□□□ 0.12
EXOSC9-201ENST00000243498 NCAPD3P42695 1498 aa15.77■□□□□ 0.12
EXOSC9-201ENST00000243498 HMGXB3Q12766 1538 aa15.75■□□□□ 0.11
EXOSC9-201ENST00000243498 SLC4A2P04920 1241 aa15.68■□□□□ 0.1
EXOSC9-201ENST00000243498 CCDC88BA6NC98 1476 aa15.59■□□□□ 0.09
EXOSC9-201ENST00000243498 CAPN15O75808 1086 aa15.55■□□□□ 0.08
EXOSC9-201ENST00000243498 SPINK5Q9NQ38 1064 aaPredicted RBP15.53■□□□□ 0.08
EXOSC9-201ENST00000243498 APLP2Q06481 763 aa15.52■□□□□ 0.07
EXOSC9-201ENST00000243498 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.51■□□□□ 0.07
EXOSC9-201ENST00000243498 HNRNPUL2Q1KMD3 747 aaKnown RBP15.51■□□□□ 0.07
EXOSC9-201ENST00000243498 DSG3P32926 999 aa15.41■□□□□ 0.06
EXOSC9-201ENST00000243498 SAMD1Q6SPF0 538 aaPredicted RBP15.4■□□□□ 0.06
EXOSC9-201ENST00000243498 SLC4A1APQ9BWU0 796 aaKnown RBP15.37■□□□□ 0.05
EXOSC9-201ENST00000243498 CADPSQ9ULU8 1353 aa15.36■□□□□ 0.05
EXOSC9-201ENST00000243498 CFTRP13569 1480 aa15.35■□□□□ 0.05
EXOSC9-201ENST00000243498 ZNF219Q9P2Y4 722 aaPredicted RBP15.35■□□□□ 0.05
EXOSC9-201ENST00000243498 PRDM2Q13029 1718 aa15.35■□□□□ 0.05
EXOSC9-201ENST00000243498 LAMC3Q9Y6N6 1575 aa15.31■□□□□ 0.04
EXOSC9-201ENST00000243498 TRHP20396 242 aaPredicted RBP15.31■□□□□ 0.04
EXOSC9-201ENST00000243498 MYCNP04198 464 aaPredicted RBP15.29■□□□□ 0.04
EXOSC9-201ENST00000243498 TRIM41Q8WV44 630 aa15.24■□□□□ 0.03
EXOSC9-201ENST00000243498 PDS5BQ9NTI5 1447 aa15.21■□□□□ 0.02
EXOSC9-201ENST00000243498 WRNQ14191 1432 aaPredicted RBP eCLIP15.17■□□□□ 0.02
EXOSC9-201ENST00000243498 NESP48681 1621 aa15.17■□□□□ 0.02
EXOSC9-201ENST00000243498 ABCB7O75027 752 aa15.17■□□□□ 0.02
EXOSC9-201ENST00000243498 FANCD2Q9BXW9 1451 aa15.17■□□□□ 0.02
EXOSC9-201ENST00000243498 ABCC8Q09428 1581 aa15.16■□□□□ 0.02
EXOSC9-201ENST00000243498 FOXD4L1Q9NU39 408 aa15.16■□□□□ 0.02
EXOSC9-201ENST00000243498 CEP164Q9UPV0 1460 aa15.12■□□□□ 0.01
EXOSC9-201ENST00000243498 TOP2BQ02880 1626 aa15.08■□□□□ 0
EXOSC9-201ENST00000243498 BIVM-ERCC5R4GMW8 1640 aa15.08■□□□□ 0
EXOSC9-201ENST00000243498 KIF21AQ7Z4S6 1674 aa15.05■□□□□ 0
EXOSC9-201ENST00000243498 SYNJ1O43426 1573 aa15.05■□□□□ 0
EXOSC9-201ENST00000243498 DNMBPQ6XZF7 1577 aa15.02■□□□□ -0
EXOSC9-201ENST00000243498 ERCC6Q03468 1493 aa15.02□□□□□ -0.01
EXOSC9-201ENST00000243498 CUX1P39880 1505 aa15.02□□□□□ -0.01
EXOSC9-201ENST00000243498 TOPBP1Q92547 1522 aa14.97□□□□□ -0.01
EXOSC9-201ENST00000243498 MRC2Q9UBG0 1479 aa14.97□□□□□ -0.01
EXOSC9-201ENST00000243498 EEA1Q15075 1411 aa14.96□□□□□ -0.01
EXOSC9-201ENST00000243498 URB2Q14146 1524 aaKnown RBP14.94□□□□□ -0.02
EXOSC9-201ENST00000243498 FGD5Q6ZNL6 1462 aa14.92□□□□□ -0.02
EXOSC9-201ENST00000243498 POLA2Q14181 598 aa14.92□□□□□ -0.02
EXOSC9-201ENST00000243498 WDR62O43379 1518 aa14.89□□□□□ -0.03
EXOSC9-201ENST00000243498 ZBTB22O15209 634 aa14.88□□□□□ -0.03
EXOSC9-201ENST00000243498 POLA1P09884 1462 aaPredicted RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms