RNA–Protein interactions for RNA: ENST00000513654.5

EXOSC9-212, Transcript of exosome component 9, humanhuman

TSL 2

Gene EXOSC9, Length 3,882 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-212ENST00000513654 NISCHQ9Y2I1 1504 aa12.26□□□□□ -0.45
EXOSC9-212ENST00000513654 CHIC1Q5VXU3 224 aa11.38□□□□□ -0.59
EXOSC9-212ENST00000513654 AEBP2Q6ZN18 517 aaPredicted RBP11.23□□□□□ -0.61
EXOSC9-212ENST00000513654 SUPT5HO00267 1087 aaKnown RBP11.08□□□□□ -0.64
EXOSC9-212ENST00000513654 SHROOM4Q9ULL8 1493 aa11.08□□□□□ -0.64
EXOSC9-212ENST00000513654 HRCP23327 699 aa11.07□□□□□ -0.64
EXOSC9-212ENST00000513654 PCGF6Q9BYE7 350 aa10.95□□□□□ -0.66
EXOSC9-212ENST00000513654 PPARGC1BQ86YN6 1023 aaKnown RBP10.9□□□□□ -0.66
EXOSC9-212ENST00000513654 MYO15BQ96JP2 1530 aa10.73□□□□□ -0.69
EXOSC9-212ENST00000513654 PELP1Q8IZL8 1130 aaKnown RBP10.67□□□□□ -0.7
EXOSC9-212ENST00000513654 LOC105371045A0A1W2PR82 267 aa10.59□□□□□ -0.71
EXOSC9-212ENST00000513654 DCAF8L2P0C7V8 631 aa10.57□□□□□ -0.72
EXOSC9-212ENST00000513654 TRIM26Q12899 539 aaPredicted RBP10.54□□□□□ -0.72
EXOSC9-212ENST00000513654 DCAF1Q9Y4B6 1507 aa10.49□□□□□ -0.73
EXOSC9-212ENST00000513654 SCAF1Q9H7N4 1312 aaKnown RBP10.46□□□□□ -0.73
EXOSC9-212ENST00000513654 ZEB1P37275 1124 aaPredicted RBP10.46□□□□□ -0.73
EXOSC9-212ENST00000513654 ZCCHC6Q5VYS8 1495 aaKnown RBP10.39□□□□□ -0.75
EXOSC9-212ENST00000513654 PHF23Q9BUL5 403 aaPredicted RBP10.34□□□□□ -0.75
EXOSC9-212ENST00000513654 CCDC180Q9P1Z9 1646 aa10.31□□□□□ -0.76
EXOSC9-212ENST00000513654 EHMT2Q96KQ7 1210 aa10.3□□□□□ -0.76
EXOSC9-212ENST00000513654 FAM9AQ8IZU1 332 aaPredicted RBP10.28□□□□□ -0.76
EXOSC9-212ENST00000513654 MYT1Q01538 1121 aa10.25□□□□□ -0.77
EXOSC9-212ENST00000513654 ACIN1Q9UKV3 1341 aaKnown RBP10.24□□□□□ -0.77
EXOSC9-212ENST00000513654 NEUROD1Q13562 356 aa10.22□□□□□ -0.77
EXOSC9-212ENST00000513654 TRIM41Q8WV44 630 aa10.21□□□□□ -0.78
EXOSC9-212ENST00000513654 GTF3C3Q9Y5Q9 886 aa10.2□□□□□ -0.78
EXOSC9-212ENST00000513654 CENPBP07199 599 aaPredicted RBP10.18□□□□□ -0.78
EXOSC9-212ENST00000513654 CCER1Q8TC90 406 aaPredicted RBP10.16□□□□□ -0.78
EXOSC9-212ENST00000513654 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.15□□□□□ -0.78
EXOSC9-212ENST00000513654 DIEXFQ68CQ4 756 aaKnown RBP10.12□□□□□ -0.79
EXOSC9-212ENST00000513654 YTHDC1Q96MU7 727 aaKnown RBP10.04□□□□□ -0.8
EXOSC9-212ENST00000513654 TTBK1Q5TCY1 1321 aaPredicted RBP10.03□□□□□ -0.8
EXOSC9-212ENST00000513654 RSF1Q96T23 1441 aaPredicted RBP9.91□□□□□ -0.82
EXOSC9-212ENST00000513654 ZNF316A6NFI3 1004 aaPredicted RBP9.91□□□□□ -0.82
EXOSC9-212ENST00000513654 ABCC9O60706 1549 aa9.84□□□□□ -0.83
EXOSC9-212ENST00000513654 MIER1Q8N108 512 aa9.84□□□□□ -0.83
EXOSC9-212ENST00000513654 RB1CC1Q8TDY2 1594 aa9.82□□□□□ -0.84
EXOSC9-212ENST00000513654 HNRNPUL2Q1KMD3 747 aaKnown RBP9.76□□□□□ -0.85
EXOSC9-212ENST00000513654 SCRIBQ14160 1630 aa9.75□□□□□ -0.85
EXOSC9-212ENST00000513654 UBTFP17480 764 aaKnown RBP9.74□□□□□ -0.85
EXOSC9-212ENST00000513654 CEP162Q5TB80 1403 aa9.67□□□□□ -0.86
EXOSC9-212ENST00000513654 SUPT16HQ9Y5B9 1047 aaKnown RBP9.66□□□□□ -0.86
EXOSC9-212ENST00000513654 CECR2Q9BXF3 1484 aa9.65□□□□□ -0.87
EXOSC9-212ENST00000513654 WRNQ14191 1432 aaPredicted RBP eCLIP9.64□□□□□ -0.87
EXOSC9-212ENST00000513654 ANP32EQ9BTT0 268 aa9.64□□□□□ -0.87
EXOSC9-212ENST00000513654 APLP2Q06481 763 aa9.62□□□□□ -0.87
EXOSC9-212ENST00000513654 TSHZ2Q9NRE2 1034 aa9.61□□□□□ -0.87
EXOSC9-212ENST00000513654 CSRNP3Q8WYN3 585 aa9.61□□□□□ -0.87
EXOSC9-212ENST00000513654 CLSPNQ9HAW4 1339 aa9.6□□□□□ -0.87
EXOSC9-212ENST00000513654 BCL11AQ9H165 835 aa9.6□□□□□ -0.87
EXOSC9-212ENST00000513654 MROH2BQ7Z745 1585 aa9.6□□□□□ -0.87
EXOSC9-212ENST00000513654 TNIKQ9UKE5 1360 aa9.6□□□□□ -0.87
EXOSC9-212ENST00000513654 RANGAP1P46060 587 aaPredicted RBP9.59□□□□□ -0.87
EXOSC9-212ENST00000513654 BCANQ96GW7 911 aa9.58□□□□□ -0.88
EXOSC9-212ENST00000513654 CCDC88BA6NC98 1476 aa9.57□□□□□ -0.88
EXOSC9-212ENST00000513654 SOGA1O94964 1423 aa9.56□□□□□ -0.88
EXOSC9-212ENST00000513654 WIZO95785 1651 aa9.55□□□□□ -0.88
EXOSC9-212ENST00000513654 ABCC8Q09428 1581 aa9.54□□□□□ -0.88
EXOSC9-212ENST00000513654 PLPPR3Q6T4P5 718 aa9.5□□□□□ -0.89
EXOSC9-212ENST00000513654 RUSC2Q8N2Y8 1516 aa9.49□□□□□ -0.89
EXOSC9-212ENST00000513654 FKBP8Q14318 412 aa9.49□□□□□ -0.89
EXOSC9-212ENST00000513654 GOLGA3Q08378 1498 aa9.47□□□□□ -0.89
EXOSC9-212ENST00000513654 EEA1Q15075 1411 aa9.46□□□□□ -0.9
EXOSC9-212ENST00000513654 NEFLP07196 543 aa9.46□□□□□ -0.9
EXOSC9-212ENST00000513654 KCNH8Q96L42 1107 aa9.45□□□□□ -0.9
EXOSC9-212ENST00000513654 CLIP1P30622 1438 aa9.44□□□□□ -0.9
EXOSC9-212ENST00000513654 KCNA4P22459 653 aa9.43□□□□□ -0.9
EXOSC9-212ENST00000513654 BAZ1AQ9NRL2 1556 aaPredicted RBP9.42□□□□□ -0.9
EXOSC9-212ENST00000513654 ITGAEP38570 1179 aa9.42□□□□□ -0.9
EXOSC9-212ENST00000513654 RBM19Q9Y4C8 960 aaKnown RBP9.42□□□□□ -0.9
EXOSC9-212ENST00000513654 DHX57Q6P158 1386 aaKnown RBP9.4□□□□□ -0.9
EXOSC9-212ENST00000513654 EIF4G1Q04637 1599 aaKnown RBP9.39□□□□□ -0.91
EXOSC9-212ENST00000513654 ERICH6Q7L0X2 663 aa9.39□□□□□ -0.91
EXOSC9-212ENST00000513654 VPS8Q8N3P4 1428 aa9.39□□□□□ -0.91
EXOSC9-212ENST00000513654 DDX10Q13206 875 aaKnown RBP9.38□□□□□ -0.91
EXOSC9-212ENST00000513654 CEP164Q9UPV0 1460 aa9.37□□□□□ -0.91
EXOSC9-212ENST00000513654 TRIM52Q96A61 297 aa9.36□□□□□ -0.91
EXOSC9-212ENST00000513654 TOP2AP11388 1531 aaKnown RBP9.34□□□□□ -0.91
EXOSC9-212ENST00000513654 NACADO15069 1562 aa9.34□□□□□ -0.91
EXOSC9-212ENST00000513654 KANK4Q5T7N3 995 aaPredicted RBP9.32□□□□□ -0.92
EXOSC9-212ENST00000513654 ADRA2BP18089 450 aa9.31□□□□□ -0.92
EXOSC9-212ENST00000513654 SMARCA2P51531 1590 aa9.31□□□□□ -0.92
EXOSC9-212ENST00000513654 HIRIP3Q9BW71 556 aaPredicted RBP9.3□□□□□ -0.92
EXOSC9-212ENST00000513654 ANP32CO43423 234 aa9.29□□□□□ -0.92
EXOSC9-212ENST00000513654 MSH5O43196 834 aa9.28□□□□□ -0.92
EXOSC9-212ENST00000513654 RAPGEF2Q9Y4G8 1499 aa9.28□□□□□ -0.92
EXOSC9-212ENST00000513654 CDK11AQ9UQ88 783 aaPredicted RBP9.28□□□□□ -0.92
EXOSC9-212ENST00000513654 IRX6P78412 446 aaPredicted RBP9.27□□□□□ -0.93
EXOSC9-212ENST00000513654 KIF21BO75037 1637 aa9.26□□□□□ -0.93
EXOSC9-212ENST00000513654 SIN3AQ96ST3 1273 aa9.25□□□□□ -0.93
EXOSC9-212ENST00000513654 SMARCA4P51532 1647 aa9.23□□□□□ -0.93
EXOSC9-212ENST00000513654 BAZ1BQ9UIG0 1483 aaKnown RBP9.22□□□□□ -0.93
EXOSC9-212ENST00000513654 CCNB3Q8WWL7 1395 aa9.22□□□□□ -0.93
EXOSC9-212ENST00000513654 SLC24A1O60721 1099 aa9.22□□□□□ -0.93
EXOSC9-212ENST00000513654 CCER2I3L3R5 266 aa9.21□□□□□ -0.94
EXOSC9-212ENST00000513654 HNRNPUQ00839 825 aaKnown RBP eCLIP9.21□□□□□ -0.94
EXOSC9-212ENST00000513654 RAB3GAP2Q9H2M9 1393 aa9.2□□□□□ -0.94
EXOSC9-212ENST00000513654 PPP1R15AO75807 674 aaPredicted RBP9.2□□□□□ -0.94
EXOSC9-212ENST00000513654 FAM50AQ14320 339 aaKnown RBP9.2□□□□□ -0.94
EXOSC9-212ENST00000513654 FANCIQ9NVI1 1328 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms