RNA–Protein interactions for RNA: ENST00000524904.5

PPP6R3-206, Transcript of protein phosphatase 6 regulatory subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP6R3, Length 4,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP6R3-206ENST00000524904 NISCHQ9Y2I1 1504 aa14.98□□□□□ -0.01
PPP6R3-206ENST00000524904 DCAF8L2P0C7V8 631 aa13.8□□□□□ -0.2
PPP6R3-206ENST00000524904 CCDC180Q9P1Z9 1646 aa13.5□□□□□ -0.25
PPP6R3-206ENST00000524904 PELP1Q8IZL8 1130 aaKnown RBP13.32□□□□□ -0.28
PPP6R3-206ENST00000524904 MYT1Q01538 1121 aa13.26□□□□□ -0.29
PPP6R3-206ENST00000524904 SHROOM4Q9ULL8 1493 aa13.04□□□□□ -0.32
PPP6R3-206ENST00000524904 SUPT5HO00267 1087 aaKnown RBP12.91□□□□□ -0.34
PPP6R3-206ENST00000524904 MYO15BQ96JP2 1530 aa12.72□□□□□ -0.37
PPP6R3-206ENST00000524904 DCAF1Q9Y4B6 1507 aa12.67□□□□□ -0.38
PPP6R3-206ENST00000524904 ZCCHC6Q5VYS8 1495 aaKnown RBP12.64□□□□□ -0.39
PPP6R3-206ENST00000524904 ABCC9O60706 1549 aa12.51□□□□□ -0.41
PPP6R3-206ENST00000524904 NACADO15069 1562 aa12.5□□□□□ -0.41
PPP6R3-206ENST00000524904 CHIC1Q5VXU3 224 aa12.43□□□□□ -0.42
PPP6R3-206ENST00000524904 TTBK1Q5TCY1 1321 aaPredicted RBP12.4□□□□□ -0.42
PPP6R3-206ENST00000524904 RB1CC1Q8TDY2 1594 aa12.37□□□□□ -0.43
PPP6R3-206ENST00000524904 EHMT2Q96KQ7 1210 aa12.27□□□□□ -0.45
PPP6R3-206ENST00000524904 PCGF6Q9BYE7 350 aa12.26□□□□□ -0.45
PPP6R3-206ENST00000524904 UNC13AQ9UPW8 1703 aa12.23□□□□□ -0.45
PPP6R3-206ENST00000524904 HRCP23327 699 aa12.23□□□□□ -0.45
PPP6R3-206ENST00000524904 PABPN1Q86U42 306 aaKnown RBP eCLIP12.22□□□□□ -0.45
PPP6R3-206ENST00000524904 ERICH6Q7L0X2 663 aa12.18□□□□□ -0.46
PPP6R3-206ENST00000524904 LOC105371045A0A1W2PR82 267 aa12.09□□□□□ -0.47
PPP6R3-206ENST00000524904 BICRAQ9NZM4 1560 aa12.07□□□□□ -0.48
PPP6R3-206ENST00000524904 FAM9AQ8IZU1 332 aaPredicted RBP12.05□□□□□ -0.48
PPP6R3-206ENST00000524904 TRIM41Q8WV44 630 aa12.04□□□□□ -0.48
PPP6R3-206ENST00000524904 TRIM26Q12899 539 aaPredicted RBP12□□□□□ -0.49
PPP6R3-206ENST00000524904 CENPBP07199 599 aaPredicted RBP11.98□□□□□ -0.49
PPP6R3-206ENST00000524904 SCRIBQ14160 1630 aa11.96□□□□□ -0.5
PPP6R3-206ENST00000524904 PPARGC1BQ86YN6 1023 aaKnown RBP11.91□□□□□ -0.5
PPP6R3-206ENST00000524904 RSF1Q96T23 1441 aaPredicted RBP11.9□□□□□ -0.5
PPP6R3-206ENST00000524904 ZEB1P37275 1124 aaPredicted RBP11.89□□□□□ -0.51
PPP6R3-206ENST00000524904 RANGAP1P46060 587 aaPredicted RBP11.83□□□□□ -0.52
PPP6R3-206ENST00000524904 PEG3Q9GZU2 1588 aa11.7□□□□□ -0.54
PPP6R3-206ENST00000524904 BCL11AQ9H165 835 aa11.67□□□□□ -0.54
PPP6R3-206ENST00000524904 CECR2Q9BXF3 1484 aa11.66□□□□□ -0.54
PPP6R3-206ENST00000524904 MROH2BQ7Z745 1585 aa11.62□□□□□ -0.55
PPP6R3-206ENST00000524904 EIF4G1Q04637 1599 aaKnown RBP11.62□□□□□ -0.55
PPP6R3-206ENST00000524904 CCER1Q8TC90 406 aaPredicted RBP11.6□□□□□ -0.55
PPP6R3-206ENST00000524904 UBTFP17480 764 aaKnown RBP11.6□□□□□ -0.55
PPP6R3-206ENST00000524904 SMARCA4P51532 1647 aa11.59□□□□□ -0.55
PPP6R3-206ENST00000524904 BAZ1AQ9NRL2 1556 aaPredicted RBP11.58□□□□□ -0.56
PPP6R3-206ENST00000524904 PRKCSHP14314 528 aaPredicted RBP11.55□□□□□ -0.56
PPP6R3-206ENST00000524904 SCAF1Q9H7N4 1312 aaKnown RBP11.54□□□□□ -0.56
PPP6R3-206ENST00000524904 ATP1B4Q9UN42 357 aaPredicted RBP11.54□□□□□ -0.56
PPP6R3-206ENST00000524904 WIZO95785 1651 aa11.54□□□□□ -0.56
PPP6R3-206ENST00000524904 GTF3C3Q9Y5Q9 886 aa11.53□□□□□ -0.56
PPP6R3-206ENST00000524904 HMGXB3Q12766 1538 aa11.52□□□□□ -0.56
PPP6R3-206ENST00000524904 SMARCA2P51531 1590 aa11.51□□□□□ -0.57
PPP6R3-206ENST00000524904 APLP2Q06481 763 aa11.5□□□□□ -0.57
PPP6R3-206ENST00000524904 CC2D2AQ9P2K1 1620 aa11.49□□□□□ -0.57
PPP6R3-206ENST00000524904 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.49□□□□□ -0.57
PPP6R3-206ENST00000524904 SLC24A1O60721 1099 aa11.49□□□□□ -0.57
PPP6R3-206ENST00000524904 NCAPD3P42695 1498 aa11.47□□□□□ -0.57
PPP6R3-206ENST00000524904 CSRNP3Q8WYN3 585 aa11.42□□□□□ -0.58
PPP6R3-206ENST00000524904 TOP2AP11388 1531 aaKnown RBP11.42□□□□□ -0.58
PPP6R3-206ENST00000524904 YTHDC1Q96MU7 727 aaKnown RBP11.41□□□□□ -0.58
PPP6R3-206ENST00000524904 ACIN1Q9UKV3 1341 aaKnown RBP11.41□□□□□ -0.58
PPP6R3-206ENST00000524904 ATAD2BQ9ULI0 1458 aa11.4□□□□□ -0.58
PPP6R3-206ENST00000524904 CCDC88BA6NC98 1476 aa11.39□□□□□ -0.59
PPP6R3-206ENST00000524904 EEA1Q15075 1411 aa11.39□□□□□ -0.59
PPP6R3-206ENST00000524904 CEP162Q5TB80 1403 aa11.37□□□□□ -0.59
PPP6R3-206ENST00000524904 ABCC8Q09428 1581 aa11.36□□□□□ -0.59
PPP6R3-206ENST00000524904 TNIKQ9UKE5 1360 aa11.35□□□□□ -0.59
PPP6R3-206ENST00000524904 DIEXFQ68CQ4 756 aaKnown RBP11.33□□□□□ -0.6
PPP6R3-206ENST00000524904 SOGA1O94964 1423 aa11.31□□□□□ -0.6
PPP6R3-206ENST00000524904 FBLN2P98095 1184 aa11.3□□□□□ -0.6
PPP6R3-206ENST00000524904 WRNQ14191 1432 aaPredicted RBP eCLIP11.3□□□□□ -0.6
PPP6R3-206ENST00000524904 GOLGA3Q08378 1498 aa11.29□□□□□ -0.6
PPP6R3-206ENST00000524904 PRDM2Q13029 1718 aa11.28□□□□□ -0.6
PPP6R3-206ENST00000524904 EIF5BO60841 1220 aaKnown RBP11.28□□□□□ -0.6
PPP6R3-206ENST00000524904 ANP32EQ9BTT0 268 aa11.27□□□□□ -0.61
PPP6R3-206ENST00000524904 HNRNPUL2Q1KMD3 747 aaKnown RBP11.26□□□□□ -0.61
PPP6R3-206ENST00000524904 CEP164Q9UPV0 1460 aa11.22□□□□□ -0.61
PPP6R3-206ENST00000524904 ZNF316A6NFI3 1004 aaPredicted RBP11.21□□□□□ -0.61
PPP6R3-206ENST00000524904 BAZ1BQ9UIG0 1483 aaKnown RBP11.21□□□□□ -0.61
PPP6R3-206ENST00000524904 CLIP1P30622 1438 aa11.2□□□□□ -0.62
PPP6R3-206ENST00000524904 RUSC2Q8N2Y8 1516 aa11.19□□□□□ -0.62
PPP6R3-206ENST00000524904 DNAJC5BQ9UF47 199 aa11.19□□□□□ -0.62
PPP6R3-206ENST00000524904 LAMC3Q9Y6N6 1575 aa11.17□□□□□ -0.62
PPP6R3-206ENST00000524904 NEUROD1Q13562 356 aa11.17□□□□□ -0.62
PPP6R3-206ENST00000524904 NEFLP07196 543 aa11.16□□□□□ -0.62
PPP6R3-206ENST00000524904 ITGAEP38570 1179 aa11.16□□□□□ -0.62
PPP6R3-206ENST00000524904 GLIPR1L2Q4G1C9 344 aa11.15□□□□□ -0.62
PPP6R3-206ENST00000524904 P3H3Q8IVL6 736 aa11.15□□□□□ -0.62
PPP6R3-206ENST00000524904 ARID3CA6NKF2 412 aa11.12□□□□□ -0.63
PPP6R3-206ENST00000524904 RTL5Q5HYW3 569 aaPredicted RBP11.11□□□□□ -0.63
PPP6R3-206ENST00000524904 VPS8Q8N3P4 1428 aa11.1□□□□□ -0.63
PPP6R3-206ENST00000524904 CFTRP13569 1480 aa11.07□□□□□ -0.64
PPP6R3-206ENST00000524904 KIF21BO75037 1637 aa11.07□□□□□ -0.64
PPP6R3-206ENST00000524904 MYT1LQ9UL68 1186 aa11.06□□□□□ -0.64
PPP6R3-206ENST00000524904 SYNJ1O43426 1573 aa11.06□□□□□ -0.64
PPP6R3-206ENST00000524904 RAPGEF2Q9Y4G8 1499 aa11.03□□□□□ -0.64
PPP6R3-206ENST00000524904 THOC2Q8NI27 1593 aaKnown RBP10.99□□□□□ -0.65
PPP6R3-206ENST00000524904 MIER1Q8N108 512 aa10.99□□□□□ -0.65
PPP6R3-206ENST00000524904 KIF27Q86VH2 1401 aa10.99□□□□□ -0.65
PPP6R3-206ENST00000524904 CLSPNQ9HAW4 1339 aa10.97□□□□□ -0.65
PPP6R3-206ENST00000524904 CADPSQ9ULU8 1353 aa10.97□□□□□ -0.65
PPP6R3-206ENST00000524904 ERCC6Q03468 1493 aa10.96□□□□□ -0.66
PPP6R3-206ENST00000524904 KIF21AQ7Z4S6 1674 aa10.95□□□□□ -0.66
PPP6R3-206ENST00000524904 TOP2BQ02880 1626 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms