RNA–Protein interactions for RNA: ENST00000524845.5

PPP6R3-205, Transcript of protein phosphatase 6 regulatory subunit 3, humanhuman

TSL 1 (best) BASIC

Gene PPP6R3, Length 2,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP6R3-205ENST00000524845 NISCHQ9Y2I1 1504 aa24.44■■□□□ 1.5
PPP6R3-205ENST00000524845 CCDC180Q9P1Z9 1646 aa21.59■■□□□ 1.05
PPP6R3-205ENST00000524845 ZCCHC6Q5VYS8 1495 aaKnown RBP20.55■□□□□ 0.88
PPP6R3-205ENST00000524845 DCAF8L2P0C7V8 631 aa20.3■□□□□ 0.84
PPP6R3-205ENST00000524845 SHROOM4Q9ULL8 1493 aa20.27■□□□□ 0.84
PPP6R3-205ENST00000524845 DCAF1Q9Y4B6 1507 aa20.27■□□□□ 0.84
PPP6R3-205ENST00000524845 ABCC9O60706 1549 aa20.23■□□□□ 0.83
PPP6R3-205ENST00000524845 MYO15BQ96JP2 1530 aa20.22■□□□□ 0.83
PPP6R3-205ENST00000524845 NACADO15069 1562 aa20.06■□□□□ 0.8
PPP6R3-205ENST00000524845 RB1CC1Q8TDY2 1594 aa19.92■□□□□ 0.78
PPP6R3-205ENST00000524845 UNC13AQ9UPW8 1703 aa19.63■□□□□ 0.73
PPP6R3-205ENST00000524845 SUPT5HO00267 1087 aaKnown RBP19.61■□□□□ 0.73
PPP6R3-205ENST00000524845 SCRIBQ14160 1630 aa19.55■□□□□ 0.72
PPP6R3-205ENST00000524845 BICRAQ9NZM4 1560 aa19.33■□□□□ 0.69
PPP6R3-205ENST00000524845 RSF1Q96T23 1441 aaPredicted RBP19.11■□□□□ 0.65
PPP6R3-205ENST00000524845 CECR2Q9BXF3 1484 aa19.08■□□□□ 0.64
PPP6R3-205ENST00000524845 PABPN1Q86U42 306 aaKnown RBP eCLIP18.96■□□□□ 0.63
PPP6R3-205ENST00000524845 MROH2BQ7Z745 1585 aa18.94■□□□□ 0.62
PPP6R3-205ENST00000524845 CHIC1Q5VXU3 224 aa18.85■□□□□ 0.61
PPP6R3-205ENST00000524845 BAZ1AQ9NRL2 1556 aaPredicted RBP18.79■□□□□ 0.6
PPP6R3-205ENST00000524845 SMARCA4P51532 1647 aa18.76■□□□□ 0.59
PPP6R3-205ENST00000524845 WIZO95785 1651 aa18.76■□□□□ 0.59
PPP6R3-205ENST00000524845 EIF4G1Q04637 1599 aaKnown RBP18.71■□□□□ 0.59
PPP6R3-205ENST00000524845 PEG3Q9GZU2 1588 aa18.69■□□□□ 0.58
PPP6R3-205ENST00000524845 SMARCA2P51531 1590 aa18.53■□□□□ 0.56
PPP6R3-205ENST00000524845 TOP2AP11388 1531 aaKnown RBP18.51■□□□□ 0.55
PPP6R3-205ENST00000524845 CC2D2AQ9P2K1 1620 aa18.51■□□□□ 0.55
PPP6R3-205ENST00000524845 HMGXB3Q12766 1538 aa18.47■□□□□ 0.55
PPP6R3-205ENST00000524845 ATAD2BQ9ULI0 1458 aa18.45■□□□□ 0.54
PPP6R3-205ENST00000524845 NCAPD3P42695 1498 aa18.43■□□□□ 0.54
PPP6R3-205ENST00000524845 CCDC88BA6NC98 1476 aa18.42■□□□□ 0.54
PPP6R3-205ENST00000524845 TRIM41Q8WV44 630 aa18.35■□□□□ 0.53
PPP6R3-205ENST00000524845 BAZ1BQ9UIG0 1483 aaKnown RBP18.29■□□□□ 0.52
PPP6R3-205ENST00000524845 LOC105371045A0A1W2PR82 267 aa18.22■□□□□ 0.51
PPP6R3-205ENST00000524845 ABCC8Q09428 1581 aa18.12■□□□□ 0.49
PPP6R3-205ENST00000524845 FAM9AQ8IZU1 332 aaPredicted RBP18.12■□□□□ 0.49
PPP6R3-205ENST00000524845 PRDM2Q13029 1718 aa18.09■□□□□ 0.49
PPP6R3-205ENST00000524845 DNAJC5BQ9UF47 199 aa18.08■□□□□ 0.49
PPP6R3-205ENST00000524845 WRNQ14191 1432 aaPredicted RBP eCLIP17.94■□□□□ 0.46
PPP6R3-205ENST00000524845 LAMC3Q9Y6N6 1575 aa17.93■□□□□ 0.46
PPP6R3-205ENST00000524845 EHMT2Q96KQ7 1210 aa17.92■□□□□ 0.46
PPP6R3-205ENST00000524845 CFTRP13569 1480 aa17.88■□□□□ 0.45
PPP6R3-205ENST00000524845 SOGA1O94964 1423 aa17.87■□□□□ 0.45
PPP6R3-205ENST00000524845 SYNJ1O43426 1573 aa17.85■□□□□ 0.45
PPP6R3-205ENST00000524845 CADPSQ9ULU8 1353 aa17.81■□□□□ 0.44
PPP6R3-205ENST00000524845 RUSC2Q8N2Y8 1516 aa17.81■□□□□ 0.44
PPP6R3-205ENST00000524845 CSRNP3Q8WYN3 585 aa17.73■□□□□ 0.43
PPP6R3-205ENST00000524845 EEA1Q15075 1411 aa17.7■□□□□ 0.42
PPP6R3-205ENST00000524845 TOP2BQ02880 1626 aa17.7■□□□□ 0.42
PPP6R3-205ENST00000524845 KIF21AQ7Z4S6 1674 aa17.7■□□□□ 0.42
PPP6R3-205ENST00000524845 NESP48681 1621 aa17.68■□□□□ 0.42
PPP6R3-205ENST00000524845 CUX1P39880 1505 aa17.68■□□□□ 0.42
PPP6R3-205ENST00000524845 PDS5BQ9NTI5 1447 aa17.64■□□□□ 0.41
PPP6R3-205ENST00000524845 BIVM-ERCC5R4GMW8 1640 aa17.64■□□□□ 0.41
PPP6R3-205ENST00000524845 FANCD2Q9BXW9 1451 aa17.61■□□□□ 0.41
PPP6R3-205ENST00000524845 CEP164Q9UPV0 1460 aa17.56■□□□□ 0.4
PPP6R3-205ENST00000524845 PCGF6Q9BYE7 350 aa17.56■□□□□ 0.4
PPP6R3-205ENST00000524845 THOC2Q8NI27 1593 aaKnown RBP17.56■□□□□ 0.4
PPP6R3-205ENST00000524845 TNIKQ9UKE5 1360 aa17.54■□□□□ 0.4
PPP6R3-205ENST00000524845 UBTFP17480 764 aaKnown RBP17.54■□□□□ 0.4
PPP6R3-205ENST00000524845 DNMBPQ6XZF7 1577 aa17.53■□□□□ 0.4
PPP6R3-205ENST00000524845 GOLGA3Q08378 1498 aa17.52■□□□□ 0.4
PPP6R3-205ENST00000524845 WDR62O43379 1518 aa17.5■□□□□ 0.39
PPP6R3-205ENST00000524845 CEP162Q5TB80 1403 aa17.49■□□□□ 0.39
PPP6R3-205ENST00000524845 MRC2Q9UBG0 1479 aa17.49■□□□□ 0.39
PPP6R3-205ENST00000524845 RAPGEF2Q9Y4G8 1499 aa17.46■□□□□ 0.39
PPP6R3-205ENST00000524845 KIF21BO75037 1637 aa17.46■□□□□ 0.38
PPP6R3-205ENST00000524845 URB2Q14146 1524 aaKnown RBP17.45■□□□□ 0.38
PPP6R3-205ENST00000524845 FGD5Q6ZNL6 1462 aa17.44■□□□□ 0.38
PPP6R3-205ENST00000524845 KIF27Q86VH2 1401 aa17.44■□□□□ 0.38
PPP6R3-205ENST00000524845 TOPBP1Q92547 1522 aa17.43■□□□□ 0.38
PPP6R3-205ENST00000524845 TRIM26Q12899 539 aaPredicted RBP17.42■□□□□ 0.38
PPP6R3-205ENST00000524845 PRXQ9BXM0 1461 aa17.41■□□□□ 0.38
PPP6R3-205ENST00000524845 ERCC6Q03468 1493 aa17.4■□□□□ 0.38
PPP6R3-205ENST00000524845 WDR97A6NE52 1622 aa17.39■□□□□ 0.38
PPP6R3-205ENST00000524845 CUX2O14529 1486 aa17.38■□□□□ 0.37
PPP6R3-205ENST00000524845 PPARGC1BQ86YN6 1023 aaKnown RBP17.38■□□□□ 0.37
PPP6R3-205ENST00000524845 IGF1RP08069 1367 aa17.35■□□□□ 0.37
PPP6R3-205ENST00000524845 RAD54L2Q9Y4B4 1467 aa17.34■□□□□ 0.37
PPP6R3-205ENST00000524845 POLA1P09884 1462 aaPredicted RBP17.34■□□□□ 0.37
PPP6R3-205ENST00000524845 TARBP1Q13395 1621 aaKnown RBP17.31■□□□□ 0.36
PPP6R3-205ENST00000524845 ERICH3Q5RHP9 1530 aa17.31■□□□□ 0.36
PPP6R3-205ENST00000524845 CLIP1P30622 1438 aa17.29■□□□□ 0.36
PPP6R3-205ENST00000524845 RANGAP1P46060 587 aaPredicted RBP17.29■□□□□ 0.36
PPP6R3-205ENST00000524845 ABCA10Q8WWZ4 1543 aa17.26■□□□□ 0.35
PPP6R3-205ENST00000524845 CARMIL1Q5VZK9 1371 aa17.23■□□□□ 0.35
PPP6R3-205ENST00000524845 IFT140Q96RY7 1462 aa17.22■□□□□ 0.35
PPP6R3-205ENST00000524845 ABCA5Q8WWZ7 1642 aa17.21■□□□□ 0.35
PPP6R3-205ENST00000524845 TTBK1Q5TCY1 1321 aaPredicted RBP17.18■□□□□ 0.34
PPP6R3-205ENST00000524845 TDRD9Q8NDG6 1382 aaKnown RBP17.18■□□□□ 0.34
PPP6R3-205ENST00000524845 HRCP23327 699 aa17.17■□□□□ 0.34
PPP6R3-205ENST00000524845 VPS8Q8N3P4 1428 aa17.15■□□□□ 0.34
PPP6R3-205ENST00000524845 PBRM1Q86U86 1689 aa17.14■□□□□ 0.34
PPP6R3-205ENST00000524845 ARAP1Q96P48 1450 aa17.11■□□□□ 0.33
PPP6R3-205ENST00000524845 EIF4G3O43432 1585 aaKnown RBP17.09■□□□□ 0.33
PPP6R3-205ENST00000524845 GAPVD1Q14C86 1478 aa17.08■□□□□ 0.33
PPP6R3-205ENST00000524845 ARHGAP35Q9NRY4 1499 aa17.07■□□□□ 0.32
PPP6R3-205ENST00000524845 CUL7Q14999 1698 aa17.07■□□□□ 0.32
PPP6R3-205ENST00000524845 AQRO60306 1485 aaKnown RBP eCLIP17.02■□□□□ 0.314e-7■■■■■ 26.8
PPP6R3-205ENST00000524845 ZNF608Q9ULD9 1512 aaPredicted RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms