RNA–Protein interactions for RNA: ENST00000393801.7

PPP6R3-204, Transcript of protein phosphatase 6 regulatory subunit 3, humanhuman

TSL 1 (best) BASIC

Gene PPP6R3, Length 5,069 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP6R3-204ENST00000393801 DCAF8L2P0C7V8 631 aa20.38■□□□□ 0.85
PPP6R3-204ENST00000393801 NISCHQ9Y2I1 1504 aa20.01■□□□□ 0.79
PPP6R3-204ENST00000393801 SUPT5HO00267 1087 aaKnown RBP19.12■□□□□ 0.65
PPP6R3-204ENST00000393801 SHROOM4Q9ULL8 1493 aa18.88■□□□□ 0.61
PPP6R3-204ENST00000393801 EHMT2Q96KQ7 1210 aa18.37■□□□□ 0.53
PPP6R3-204ENST00000393801 APLP2Q06481 763 aa18.29■□□□□ 0.52
PPP6R3-204ENST00000393801 FAM9AQ8IZU1 332 aaPredicted RBP18.29■□□□□ 0.52
PPP6R3-204ENST00000393801 TRIM41Q8WV44 630 aa17.86■□□□□ 0.45
PPP6R3-204ENST00000393801 TTBK1Q5TCY1 1321 aaPredicted RBP17.74■□□□□ 0.43
PPP6R3-204ENST00000393801 PELP1Q8IZL8 1130 aaKnown RBP17.71■□□□□ 0.43
PPP6R3-204ENST00000393801 PCGF6Q9BYE7 350 aa17.68■□□□□ 0.42
PPP6R3-204ENST00000393801 RANGAP1P46060 587 aaPredicted RBP17.65■□□□□ 0.42
PPP6R3-204ENST00000393801 UBTFP17480 764 aaKnown RBP17.63■□□□□ 0.41
PPP6R3-204ENST00000393801 ATP1B4Q9UN42 357 aaPredicted RBP17.62■□□□□ 0.41
PPP6R3-204ENST00000393801 ZEB1P37275 1124 aaPredicted RBP17.44■□□□□ 0.38
PPP6R3-204ENST00000393801 CCER1Q8TC90 406 aaPredicted RBP17.36■□□□□ 0.37
PPP6R3-204ENST00000393801 ABCC9O60706 1549 aa17.31■□□□□ 0.36
PPP6R3-204ENST00000393801 CENPBP07199 599 aaPredicted RBP17.21■□□□□ 0.35
PPP6R3-204ENST00000393801 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.14■□□□□ 0.33
PPP6R3-204ENST00000393801 HNRNPUL2Q1KMD3 747 aaKnown RBP17.14■□□□□ 0.33
PPP6R3-204ENST00000393801 PPARGC1BQ86YN6 1023 aaKnown RBP17.09■□□□□ 0.33
PPP6R3-204ENST00000393801 PABPN1Q86U42 306 aaKnown RBP eCLIP17.09■□□□□ 0.33
PPP6R3-204ENST00000393801 MYT1LQ9UL68 1186 aa17.07■□□□□ 0.32
PPP6R3-204ENST00000393801 CHIC1Q5VXU3 224 aa16.99■□□□□ 0.31
PPP6R3-204ENST00000393801 TRIM26Q12899 539 aaPredicted RBP16.99■□□□□ 0.31
PPP6R3-204ENST00000393801 ERICH6Q7L0X2 663 aa16.99■□□□□ 0.31
PPP6R3-204ENST00000393801 YTHDC1Q96MU7 727 aaKnown RBP16.96■□□□□ 0.31
PPP6R3-204ENST00000393801 ITGAEP38570 1179 aa16.9■□□□□ 0.3
PPP6R3-204ENST00000393801 NEFLP07196 543 aa16.87■□□□□ 0.29
PPP6R3-204ENST00000393801 LOC105371045A0A1W2PR82 267 aa16.82■□□□□ 0.28
PPP6R3-204ENST00000393801 HRCP23327 699 aa16.67■□□□□ 0.26
PPP6R3-204ENST00000393801 POLR3GLQ9BT43 218 aa16.66■□□□□ 0.26
PPP6R3-204ENST00000393801 FBLN2P98095 1184 aa16.61■□□□□ 0.25
PPP6R3-204ENST00000393801 FAM50AQ14320 339 aaKnown RBP16.61■□□□□ 0.25
PPP6R3-204ENST00000393801 CCDC180Q9P1Z9 1646 aa16.58■□□□□ 0.24
PPP6R3-204ENST00000393801 SCRIBQ14160 1630 aa16.57■□□□□ 0.24
PPP6R3-204ENST00000393801 ZCCHC6Q5VYS8 1495 aaKnown RBP16.54■□□□□ 0.24
PPP6R3-204ENST00000393801 TRIM52Q96A61 297 aa16.52■□□□□ 0.23
PPP6R3-204ENST00000393801 CNGB1Q14028 1251 aaPredicted RBP16.51■□□□□ 0.23
PPP6R3-204ENST00000393801 SLC4A1APQ9BWU0 796 aaKnown RBP16.47■□□□□ 0.23
PPP6R3-204ENST00000393801 CSRNP3Q8WYN3 585 aa16.45■□□□□ 0.22
PPP6R3-204ENST00000393801 CDK11AQ9UQ88 783 aaPredicted RBP16.39■□□□□ 0.21
PPP6R3-204ENST00000393801 RB1CC1Q8TDY2 1594 aa16.35■□□□□ 0.21
PPP6R3-204ENST00000393801 DAXXQ9UER7 740 aaPredicted RBP16.33■□□□□ 0.2
PPP6R3-204ENST00000393801 P3H3Q8IVL6 736 aa16.3■□□□□ 0.2
PPP6R3-204ENST00000393801 DIEXFQ68CQ4 756 aaKnown RBP16.29■□□□□ 0.2
PPP6R3-204ENST00000393801 NEUROD1Q13562 356 aa16.29■□□□□ 0.2
PPP6R3-204ENST00000393801 MYT1Q01538 1121 aa16.28■□□□□ 0.2
PPP6R3-204ENST00000393801 NPM1P06748 294 aaKnown RBP eCLIP16.23■□□□□ 0.19
PPP6R3-204ENST00000393801 ZNF326Q5BKZ1 582 aaKnown RBP16.22■□□□□ 0.19
PPP6R3-204ENST00000393801 ARID3CA6NKF2 412 aa16.2■□□□□ 0.18
PPP6R3-204ENST00000393801 NACADO15069 1562 aa16.19■□□□□ 0.18
PPP6R3-204ENST00000393801 ZNF777Q9ULD5 760 aaPredicted RBP16.19■□□□□ 0.18
PPP6R3-204ENST00000393801 ESF1Q9H501 851 aaKnown RBP16.16■□□□□ 0.18
PPP6R3-204ENST00000393801 BCANQ96GW7 911 aa16.13■□□□□ 0.17
PPP6R3-204ENST00000393801 ANP32CO43423 234 aa16.12■□□□□ 0.17
PPP6R3-204ENST00000393801 CLSPNQ9HAW4 1339 aa16.07■□□□□ 0.16
PPP6R3-204ENST00000393801 CHMP7Q8WUX9 453 aaPredicted RBP16.05■□□□□ 0.16
PPP6R3-204ENST00000393801 NEFMP07197 916 aa16.05■□□□□ 0.16
PPP6R3-204ENST00000393801 STAG3Q9UJ98 1225 aa15.98■□□□□ 0.15
PPP6R3-204ENST00000393801 BAZ1BQ9UIG0 1483 aaKnown RBP15.97■□□□□ 0.15
PPP6R3-204ENST00000393801 ZBTB47Q9UFB7 747 aaPredicted RBP15.97■□□□□ 0.15
PPP6R3-204ENST00000393801 ZNF316A6NFI3 1004 aaPredicted RBP15.97■□□□□ 0.15
PPP6R3-204ENST00000393801 EEA1Q15075 1411 aa15.95■□□□□ 0.14
PPP6R3-204ENST00000393801 RTL5Q5HYW3 569 aaPredicted RBP15.94■□□□□ 0.14
PPP6R3-204ENST00000393801 TSPY4P0CV99 314 aa15.93■□□□□ 0.14
PPP6R3-204ENST00000393801 TSPY10P0CW01 314 aa15.93■□□□□ 0.14
PPP6R3-204ENST00000393801 GTF3C3Q9Y5Q9 886 aa15.93■□□□□ 0.14
PPP6R3-204ENST00000393801 RSF1Q96T23 1441 aaPredicted RBP15.93■□□□□ 0.14
PPP6R3-204ENST00000393801 TONSLQ96HA7 1378 aa15.93■□□□□ 0.14
PPP6R3-204ENST00000393801 MTUS2Q5JR59 1369 aa15.92■□□□□ 0.14
PPP6R3-204ENST00000393801 CHGAP10645 457 aaKnown RBP15.91■□□□□ 0.14
PPP6R3-204ENST00000393801 DCAF1Q9Y4B6 1507 aa15.88■□□□□ 0.13
PPP6R3-204ENST00000393801 SLC24A1O60721 1099 aa15.86■□□□□ 0.13
PPP6R3-204ENST00000393801 CANXP27824 592 aaKnown RBP15.86■□□□□ 0.13
PPP6R3-204ENST00000393801 CLIP1P30622 1438 aa15.85■□□□□ 0.13
PPP6R3-204ENST00000393801 WRNQ14191 1432 aaPredicted RBP eCLIP15.84■□□□□ 0.13
PPP6R3-204ENST00000393801 BAZ1AQ9NRL2 1556 aaPredicted RBP15.84■□□□□ 0.13
PPP6R3-204ENST00000393801 ACIN1Q9UKV3 1341 aaKnown RBP15.82■□□□□ 0.12
PPP6R3-204ENST00000393801 KIF27Q86VH2 1401 aa15.81■□□□□ 0.12
PPP6R3-204ENST00000393801 CHIC2Q9UKJ5 165 aa15.8■□□□□ 0.12
PPP6R3-204ENST00000393801 PLEKHD1A6NEE1 506 aa15.8■□□□□ 0.12
PPP6R3-204ENST00000393801 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.8■□□□□ 0.121e-6■■□□□ 14
PPP6R3-204ENST00000393801 GOLGA3Q08378 1498 aa15.8■□□□□ 0.12
PPP6R3-204ENST00000393801 ERCC6Q03468 1493 aa15.79■□□□□ 0.12
PPP6R3-204ENST00000393801 PLPPR3Q6T4P5 718 aa15.75■□□□□ 0.11
PPP6R3-204ENST00000393801 BCL11AQ9H165 835 aa15.72■□□□□ 0.11
PPP6R3-204ENST00000393801 KCNH8Q96L42 1107 aa15.69■□□□□ 0.1
PPP6R3-204ENST00000393801 CEP164Q9UPV0 1460 aa15.68■□□□□ 0.1
PPP6R3-204ENST00000393801 CEP162Q5TB80 1403 aa15.65■□□□□ 0.1
PPP6R3-204ENST00000393801 CFDP1Q9UEE9 299 aaPredicted RBP15.62■□□□□ 0.09
PPP6R3-204ENST00000393801 TNIKQ9UKE5 1360 aa15.62■□□□□ 0.09
PPP6R3-204ENST00000393801 KDM2AQ9Y2K7 1162 aa15.6■□□□□ 0.09
PPP6R3-204ENST00000393801 PPP1R15AO75807 674 aaPredicted RBP15.59■□□□□ 0.09
PPP6R3-204ENST00000393801 RRP7BPQ9NSQ0 103 aa15.59■□□□□ 0.09
PPP6R3-204ENST00000393801 CECR2Q9BXF3 1484 aa15.59■□□□□ 0.09
PPP6R3-204ENST00000393801 SMARCA2P51531 1590 aa15.57■□□□□ 0.08
PPP6R3-204ENST00000393801 DDX10Q13206 875 aaKnown RBP15.56■□□□□ 0.08
PPP6R3-204ENST00000393801 TMC1Q8TDI8 760 aa15.56■□□□□ 0.08
PPP6R3-204ENST00000393801 WDR43Q15061 677 aaKnown RBP eCLIP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms