RNA–Protein interactions for RNA: ENST00000411896.6

GRAMD1A-202, Transcript of GRAM domain containing 1A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene GRAMD1A, Length 2,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-202ENST00000411896 NISCHQ9Y2I1 1504 aa35.1■■■■□ 3.21
GRAMD1A-202ENST00000411896 CCDC180Q9P1Z9 1646 aa29.89■■■□□ 2.38
GRAMD1A-202ENST00000411896 SHROOM4Q9ULL8 1493 aa29.82■■■□□ 2.36
GRAMD1A-202ENST00000411896 ZCCHC6Q5VYS8 1495 aaKnown RBP29.7■■■□□ 2.35
GRAMD1A-202ENST00000411896 SUPT5HO00267 1087 aaKnown RBP29.2■■■□□ 2.26
GRAMD1A-202ENST00000411896 DCAF8L2P0C7V8 631 aa28.97■■■□□ 2.23
GRAMD1A-202ENST00000411896 DCAF1Q9Y4B6 1507 aa28.82■■■□□ 2.2
GRAMD1A-202ENST00000411896 CHIC1Q5VXU3 224 aa28.42■■■□□ 2.14
GRAMD1A-202ENST00000411896 MYO15BQ96JP2 1530 aa28.35■■■□□ 2.13
GRAMD1A-202ENST00000411896 ABCC9O60706 1549 aa28.02■■■□□ 2.08
GRAMD1A-202ENST00000411896 SCRIBQ14160 1630 aa27.98■■■□□ 2.07
GRAMD1A-202ENST00000411896 RSF1Q96T23 1441 aaPredicted RBP27.75■■■□□ 2.03
GRAMD1A-202ENST00000411896 NACADO15069 1562 aa27.62■■■□□ 2.01
GRAMD1A-202ENST00000411896 LOC105371045A0A1W2PR82 267 aa27.55■■■□□ 2
GRAMD1A-202ENST00000411896 RB1CC1Q8TDY2 1594 aa27.47■■□□□ 1.99
GRAMD1A-202ENST00000411896 HRCP23327 699 aa27.45■■□□□ 1.99
GRAMD1A-202ENST00000411896 PCGF6Q9BYE7 350 aa27.43■■□□□ 1.98
GRAMD1A-202ENST00000411896 CECR2Q9BXF3 1484 aa27.37■■□□□ 1.97
GRAMD1A-202ENST00000411896 MROH2BQ7Z745 1585 aa27.29■■□□□ 1.96
GRAMD1A-202ENST00000411896 TRIM41Q8WV44 630 aa27.21■■□□□ 1.95
GRAMD1A-202ENST00000411896 WIZO95785 1651 aa27.14■■□□□ 1.93
GRAMD1A-202ENST00000411896 BAZ1AQ9NRL2 1556 aaPredicted RBP26.98■■□□□ 1.91
GRAMD1A-202ENST00000411896 FAM9AQ8IZU1 332 aaPredicted RBP26.97■■□□□ 1.91
GRAMD1A-202ENST00000411896 TRIM26Q12899 539 aaPredicted RBP26.95■■□□□ 1.91
GRAMD1A-202ENST00000411896 PPARGC1BQ86YN6 1023 aaKnown RBP26.88■■□□□ 1.89
GRAMD1A-202ENST00000411896 EIF4G1Q04637 1599 aaKnown RBP26.82■■□□□ 1.88
GRAMD1A-202ENST00000411896 UNC13AQ9UPW8 1703 aa26.79■■□□□ 1.88
GRAMD1A-202ENST00000411896 SMARCA4P51532 1647 aa26.75■■□□□ 1.87
GRAMD1A-202ENST00000411896 TOP2AP11388 1531 aaKnown RBP26.73■■□□□ 1.87
GRAMD1A-202ENST00000411896 EHMT2Q96KQ7 1210 aa26.72■■□□□ 1.87
GRAMD1A-202ENST00000411896 CCDC88BA6NC98 1476 aa26.59■■□□□ 1.85
GRAMD1A-202ENST00000411896 SMARCA2P51531 1590 aa26.58■■□□□ 1.85
GRAMD1A-202ENST00000411896 ABCC8Q09428 1581 aa26.5■■□□□ 1.83
GRAMD1A-202ENST00000411896 BICRAQ9NZM4 1560 aa26.47■■□□□ 1.83
GRAMD1A-202ENST00000411896 PABPN1Q86U42 306 aaKnown RBP eCLIP26.42■■□□□ 1.821e-6■■□□□ 12.1
GRAMD1A-202ENST00000411896 ZEB1P37275 1124 aaPredicted RBP26.33■■□□□ 1.81
GRAMD1A-202ENST00000411896 PEG3Q9GZU2 1588 aa26.25■■□□□ 1.79
GRAMD1A-202ENST00000411896 SOGA1O94964 1423 aa26.24■■□□□ 1.79
GRAMD1A-202ENST00000411896 RUSC2Q8N2Y8 1516 aa26.12■■□□□ 1.77
GRAMD1A-202ENST00000411896 EEA1Q15075 1411 aa26.1■■□□□ 1.77
GRAMD1A-202ENST00000411896 CEP162Q5TB80 1403 aa26.1■■□□□ 1.77
GRAMD1A-202ENST00000411896 WRNQ14191 1432 aaPredicted RBP eCLIP26.07■■□□□ 1.769e-6■■■■■ 50.1
GRAMD1A-202ENST00000411896 TNIKQ9UKE5 1360 aa26.06■■□□□ 1.76
GRAMD1A-202ENST00000411896 ATAD2BQ9ULI0 1458 aa26.06■■□□□ 1.76
GRAMD1A-202ENST00000411896 CSRNP3Q8WYN3 585 aa26.06■■□□□ 1.76
GRAMD1A-202ENST00000411896 BAZ1BQ9UIG0 1483 aaKnown RBP25.97■■□□□ 1.75
GRAMD1A-202ENST00000411896 SYNJ1O43426 1573 aa25.97■■□□□ 1.75
GRAMD1A-202ENST00000411896 GOLGA3Q08378 1498 aa25.93■■□□□ 1.74
GRAMD1A-202ENST00000411896 UBTFP17480 764 aaKnown RBP25.91■■□□□ 1.74
GRAMD1A-202ENST00000411896 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.88■■□□□ 1.73
GRAMD1A-202ENST00000411896 TTBK1Q5TCY1 1321 aaPredicted RBP25.86■■□□□ 1.73
GRAMD1A-202ENST00000411896 CCER1Q8TC90 406 aaPredicted RBP25.79■■□□□ 1.72
GRAMD1A-202ENST00000411896 CEP164Q9UPV0 1460 aa25.78■■□□□ 1.72
GRAMD1A-202ENST00000411896 KIF21BO75037 1637 aa25.78■■□□□ 1.72
GRAMD1A-202ENST00000411896 TOP2BQ02880 1626 aa25.64■■□□□ 1.7
GRAMD1A-202ENST00000411896 CLIP1P30622 1438 aa25.62■■□□□ 1.69
GRAMD1A-202ENST00000411896 RAPGEF2Q9Y4G8 1499 aa25.61■■□□□ 1.69
GRAMD1A-202ENST00000411896 HMGXB3Q12766 1538 aa25.57■■□□□ 1.68
GRAMD1A-202ENST00000411896 BIVM-ERCC5R4GMW8 1640 aa25.57■■□□□ 1.68
GRAMD1A-202ENST00000411896 NCAPD3P42695 1498 aa25.56■■□□□ 1.68
GRAMD1A-202ENST00000411896 VPS8Q8N3P4 1428 aa25.51■■□□□ 1.67
GRAMD1A-202ENST00000411896 PELP1Q8IZL8 1130 aaKnown RBP25.5■■□□□ 1.67
GRAMD1A-202ENST00000411896 CUX1P39880 1505 aa25.41■■□□□ 1.66
GRAMD1A-202ENST00000411896 RANGAP1P46060 587 aaPredicted RBP25.39■■□□□ 1.65
GRAMD1A-202ENST00000411896 PRXQ9BXM0 1461 aa25.38■■□□□ 1.65
GRAMD1A-202ENST00000411896 ERICH3Q5RHP9 1530 aa25.37■■□□□ 1.65
GRAMD1A-202ENST00000411896 CFTRP13569 1480 aa25.34■■□□□ 1.65
GRAMD1A-202ENST00000411896 HNRNPUL2Q1KMD3 747 aaKnown RBP25.32■■□□□ 1.64
GRAMD1A-202ENST00000411896 APLP2Q06481 763 aa25.3■■□□□ 1.64
GRAMD1A-202ENST00000411896 DIEXFQ68CQ4 756 aaKnown RBP25.26■■□□□ 1.63
GRAMD1A-202ENST00000411896 ARAP1Q96P48 1450 aa25.25■■□□□ 1.63
GRAMD1A-202ENST00000411896 SCAF1Q9H7N4 1312 aaKnown RBP25.25■■□□□ 1.63
GRAMD1A-202ENST00000411896 KIF27Q86VH2 1401 aa25.24■■□□□ 1.63
GRAMD1A-202ENST00000411896 PRDM2Q13029 1718 aa25.16■■□□□ 1.62
GRAMD1A-202ENST00000411896 ZNF316A6NFI3 1004 aaPredicted RBP25.12■■□□□ 1.61
GRAMD1A-202ENST00000411896 KANK4Q5T7N3 995 aaPredicted RBP25.06■■□□□ 1.6
GRAMD1A-202ENST00000411896 CADPSQ9ULU8 1353 aa25.05■■□□□ 1.6
GRAMD1A-202ENST00000411896 ACIN1Q9UKV3 1341 aaKnown RBP25.04■■□□□ 1.6
GRAMD1A-202ENST00000411896 ARHGAP35Q9NRY4 1499 aa25.03■■□□□ 1.6
GRAMD1A-202ENST00000411896 CUX2O14529 1486 aa25.02■■□□□ 1.6
GRAMD1A-202ENST00000411896 NEUROD1Q13562 356 aa25.01■■□□□ 1.59
GRAMD1A-202ENST00000411896 IGF1RP08069 1367 aa24.98■■□□□ 1.59
GRAMD1A-202ENST00000411896 FGD5Q6ZNL6 1462 aa24.95■■□□□ 1.58
GRAMD1A-202ENST00000411896 CC2D2AQ9P2K1 1620 aa24.93■■□□□ 1.58
GRAMD1A-202ENST00000411896 RRBP1Q9P2E9 1410 aaKnown RBP24.92■■□□□ 1.58
GRAMD1A-202ENST00000411896 DHX57Q6P158 1386 aaKnown RBP24.88■■□□□ 1.57
GRAMD1A-202ENST00000411896 CARMIL1Q5VZK9 1371 aa24.87■■□□□ 1.57
GRAMD1A-202ENST00000411896 CENPBP07199 599 aaPredicted RBP24.86■■□□□ 1.57
GRAMD1A-202ENST00000411896 FANCD2Q9BXW9 1451 aa24.82■■□□□ 1.56
GRAMD1A-202ENST00000411896 CLSPNQ9HAW4 1339 aa24.81■■□□□ 1.56
GRAMD1A-202ENST00000411896 CCNB3Q8WWL7 1395 aa24.79■■□□□ 1.56
GRAMD1A-202ENST00000411896 MYT1Q01538 1121 aa24.76■■□□□ 1.55
GRAMD1A-202ENST00000411896 MIER1Q8N108 512 aa24.75■■□□□ 1.55
GRAMD1A-202ENST00000411896 TIAM1Q13009 1591 aa24.75■■□□□ 1.55
GRAMD1A-202ENST00000411896 MAP3K1Q13233 1512 aa24.72■■□□□ 1.55
GRAMD1A-202ENST00000411896 GTF3C3Q9Y5Q9 886 aa24.72■■□□□ 1.55
GRAMD1A-202ENST00000411896 DNMBPQ6XZF7 1577 aa24.72■■□□□ 1.55
GRAMD1A-202ENST00000411896 RAD54L2Q9Y4B4 1467 aa24.7■■□□□ 1.54
GRAMD1A-202ENST00000411896 TOPBP1Q92547 1522 aa24.67■■□□□ 1.54
GRAMD1A-202ENST00000411896 NESP48681 1621 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms