RNA–Protein interactions for RNA: ENST00000450351.1

LSS-204, Transcript of lanosterol synthase, humanhuman

TSL 5

Gene LSS, Length 853 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-204ENST00000450351 NISCHQ9Y2I1 1504 aa43.5■■■■■ 4.55
LSS-204ENST00000450351 CCDC180Q9P1Z9 1646 aa38.61■■■■□ 3.77
LSS-204ENST00000450351 ABCC9O60706 1549 aa37.41■■■■□ 3.58
LSS-204ENST00000450351 ZCCHC6Q5VYS8 1495 aaKnown RBP36.3■■■■□ 3.4
LSS-204ENST00000450351 DCAF8L2P0C7V8 631 aa36.25■■■■□ 3.39
LSS-204ENST00000450351 NACADO15069 1562 aa36.23■■■■□ 3.39
LSS-204ENST00000450351 RB1CC1Q8TDY2 1594 aa36.2■■■■□ 3.39
LSS-204ENST00000450351 MYO15BQ96JP2 1530 aa36.1■■■■□ 3.37
LSS-204ENST00000450351 DCAF1Q9Y4B6 1507 aa36.04■■■■□ 3.36
LSS-204ENST00000450351 UNC13AQ9UPW8 1703 aa35.3■■■■□ 3.24
LSS-204ENST00000450351 SCRIBQ14160 1630 aa35.21■■■■□ 3.23
LSS-204ENST00000450351 PABPN1Q86U42 306 aaKnown RBP eCLIP34.98■■■■□ 3.19
LSS-204ENST00000450351 BICRAQ9NZM4 1560 aa34.97■■■■□ 3.19
LSS-204ENST00000450351 SHROOM4Q9ULL8 1493 aa34.78■■■■□ 3.16
LSS-204ENST00000450351 EIF4G1Q04637 1599 aaKnown RBP34.1■■■■□ 3.05
LSS-204ENST00000450351 DNAJC5BQ9UF47 199 aa33.94■■■■□ 3.02
LSS-204ENST00000450351 CC2D2AQ9P2K1 1620 aa33.87■■■■□ 3.01
LSS-204ENST00000450351 CECR2Q9BXF3 1484 aa33.79■■■■□ 3
LSS-204ENST00000450351 BAZ1AQ9NRL2 1556 aaPredicted RBP33.75■■■□□ 2.99
LSS-204ENST00000450351 SMARCA4P51532 1647 aa33.7■■■□□ 2.99
LSS-204ENST00000450351 MROH2BQ7Z745 1585 aa33.49■■■□□ 2.95
LSS-204ENST00000450351 SMARCA2P51531 1590 aa33.47■■■□□ 2.95
LSS-204ENST00000450351 ATAD2BQ9ULI0 1458 aa33.43■■■□□ 2.94
LSS-204ENST00000450351 NCAPD3P42695 1498 aa33.37■■■□□ 2.93
LSS-204ENST00000450351 PEG3Q9GZU2 1588 aa33.37■■■□□ 2.93
LSS-204ENST00000450351 HMGXB3Q12766 1538 aa33.27■■■□□ 2.92
LSS-204ENST00000450351 BAZ1BQ9UIG0 1483 aaKnown RBP33.23■■■□□ 2.91
LSS-204ENST00000450351 RSF1Q96T23 1441 aaPredicted RBP33.22■■■□□ 2.91
LSS-204ENST00000450351 WIZO95785 1651 aa33.17■■■□□ 2.9
LSS-204ENST00000450351 TOP2AP11388 1531 aaKnown RBP32.88■■■□□ 2.85
LSS-204ENST00000450351 SUPT5HO00267 1087 aaKnown RBP32.64■■■□□ 2.82
LSS-204ENST00000450351 LAMC3Q9Y6N6 1575 aa32.49■■■□□ 2.79
LSS-204ENST00000450351 CCDC88BA6NC98 1476 aa32.44■■■□□ 2.78
LSS-204ENST00000450351 CADPSQ9ULU8 1353 aa32.43■■■□□ 2.78
LSS-204ENST00000450351 NESP48681 1621 aa32.42■■■□□ 2.78
LSS-204ENST00000450351 ERCC6Q03468 1493 aa32.32■■■□□ 2.76
LSS-204ENST00000450351 CFTRP13569 1480 aa32.29■■■□□ 2.76
LSS-204ENST00000450351 PDS5BQ9NTI5 1447 aa32.28■■■□□ 2.76
LSS-204ENST00000450351 PRDM2Q13029 1718 aa32.13■■■□□ 2.73
LSS-204ENST00000450351 KIF21AQ7Z4S6 1674 aa32.1■■■□□ 2.73
LSS-204ENST00000450351 FANCD2Q9BXW9 1451 aa32.06■■■□□ 2.72
LSS-204ENST00000450351 CEP164Q9UPV0 1460 aa32.03■■■□□ 2.72
LSS-204ENST00000450351 THOC2Q8NI27 1593 aaKnown RBP31.91■■■□□ 2.7
LSS-204ENST00000450351 MRC2Q9UBG0 1479 aa31.91■■■□□ 2.7
LSS-204ENST00000450351 CUX2O14529 1486 aa31.84■■■□□ 2.69
LSS-204ENST00000450351 WDR62O43379 1518 aa31.77■■■□□ 2.68
LSS-204ENST00000450351 ABCC8Q09428 1581 aa31.68■■■□□ 2.66
LSS-204ENST00000450351 URB2Q14146 1524 aaKnown RBP31.67■■■□□ 2.66
LSS-204ENST00000450351 DNMBPQ6XZF7 1577 aa31.59■■■□□ 2.65
LSS-204ENST00000450351 TOPBP1Q92547 1522 aa31.57■■■□□ 2.64
LSS-204ENST00000450351 CUX1P39880 1505 aa31.41■■■□□ 2.62
LSS-204ENST00000450351 WRNQ14191 1432 aaPredicted RBP eCLIP31.38■■■□□ 2.61
LSS-204ENST00000450351 IFT140Q96RY7 1462 aa31.34■■■□□ 2.61
LSS-204ENST00000450351 POLA1P09884 1462 aaPredicted RBP31.32■■■□□ 2.6
LSS-204ENST00000450351 FGD5Q6ZNL6 1462 aa31.29■■■□□ 2.6
LSS-204ENST00000450351 TOP2BQ02880 1626 aa31.27■■■□□ 2.6
LSS-204ENST00000450351 BIVM-ERCC5R4GMW8 1640 aa31.27■■■□□ 2.6
LSS-204ENST00000450351 SYNJ1O43426 1573 aa31.23■■■□□ 2.59
LSS-204ENST00000450351 SOGA1O94964 1423 aa31.22■■■□□ 2.59
LSS-204ENST00000450351 TARBP1Q13395 1621 aaKnown RBP31.18■■■□□ 2.58
LSS-204ENST00000450351 RAD54L2Q9Y4B4 1467 aa31.14■■■□□ 2.58
LSS-204ENST00000450351 ZNF608Q9ULD9 1512 aaPredicted RBP31.08■■■□□ 2.57
LSS-204ENST00000450351 WDR97A6NE52 1622 aa31.06■■■□□ 2.56
LSS-204ENST00000450351 EIF4G3O43432 1585 aaKnown RBP31.05■■■□□ 2.56
LSS-204ENST00000450351 ABCA10Q8WWZ4 1543 aa31.02■■■□□ 2.56
LSS-204ENST00000450351 TDRD9Q8NDG6 1382 aaKnown RBP30.97■■■□□ 2.55
LSS-204ENST00000450351 AQRO60306 1485 aaKnown RBP eCLIP30.96■■■□□ 2.551e-6■■■■□ 21
LSS-204ENST00000450351 TRIM41Q8WV44 630 aa30.87■■■□□ 2.53
LSS-204ENST00000450351 GAPVD1Q14C86 1478 aa30.87■■■□□ 2.53
LSS-204ENST00000450351 ABCA5Q8WWZ7 1642 aa30.86■■■□□ 2.53
LSS-204ENST00000450351 GRIN2BQ13224 1484 aa30.84■■■□□ 2.53
LSS-204ENST00000450351 PBRM1Q86U86 1689 aa30.8■■■□□ 2.52
LSS-204ENST00000450351 MAGI1Q96QZ7 1491 aaPredicted RBP30.74■■■□□ 2.51
LSS-204ENST00000450351 KIF27Q86VH2 1401 aa30.73■■■□□ 2.51
LSS-204ENST00000450351 SNAPC4Q5SXM2 1469 aa30.73■■■□□ 2.51
LSS-204ENST00000450351 ERICH3Q5RHP9 1530 aa30.68■■■□□ 2.5
LSS-204ENST00000450351 SYNJ2O15056 1496 aa30.6■■■□□ 2.49
LSS-204ENST00000450351 FBLN2P98095 1184 aa30.6■■■□□ 2.49
LSS-204ENST00000450351 CHIC1Q5VXU3 224 aa30.59■■■□□ 2.49
LSS-204ENST00000450351 CHD1O14646 1710 aa30.59■■■□□ 2.49
LSS-204ENST00000450351 CHMP7Q8WUX9 453 aaPredicted RBP30.58■■■□□ 2.49
LSS-204ENST00000450351 OSCARQ8IYS5 282 aa30.57■■■□□ 2.48
LSS-204ENST00000450351 ADAMTS12P58397 1594 aa30.55■■■□□ 2.48
LSS-204ENST00000450351 FHAD1B1AJZ9 1412 aa30.54■■■□□ 2.48
LSS-204ENST00000450351 CUL7Q14999 1698 aa30.49■■■□□ 2.47
LSS-204ENST00000450351 IGF1RP08069 1367 aa30.48■■■□□ 2.47
LSS-204ENST00000450351 DNAJC5Q9H3Z4 198 aa30.45■■■□□ 2.47
LSS-204ENST00000450351 GRIN2AQ12879 1464 aa30.43■■■□□ 2.46
LSS-204ENST00000450351 RUSC2Q8N2Y8 1516 aa30.4■■■□□ 2.46
LSS-204ENST00000450351 EEA1Q15075 1411 aa30.38■■■□□ 2.45
LSS-204ENST00000450351 CARMIL1Q5VZK9 1371 aa30.36■■■□□ 2.45
LSS-204ENST00000450351 NUP160Q12769 1436 aa30.25■■■□□ 2.43
LSS-204ENST00000450351 CLASP1Q7Z460 1538 aa30.24■■■□□ 2.43
LSS-204ENST00000450351 CSRNP3Q8WYN3 585 aa30.23■■■□□ 2.43
LSS-204ENST00000450351 RAPGEF2Q9Y4G8 1499 aa30.23■■■□□ 2.43
LSS-204ENST00000450351 CEP170Q5SW79 1584 aa30.22■■■□□ 2.43
LSS-204ENST00000450351 FAM9AQ8IZU1 332 aaPredicted RBP30.16■■■□□ 2.42
LSS-204ENST00000450351 PRXQ9BXM0 1461 aa30.15■■■□□ 2.42
LSS-204ENST00000450351 KIAA0586Q9BVV6 1533 aa30.06■■■□□ 2.4
LSS-204ENST00000450351 ARHGEF11O15085 1522 aa30.04■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms