RNA–Protein interactions for RNA: ENST00000424536.2

GRAMD1A-203, Transcript of GRAM domain containing 1A, humanhuman

TSL 2 BASIC

Gene GRAMD1A, Length 808 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-203ENST00000424536 NISCHQ9Y2I1 1504 aa33.46■■■□□ 2.95
GRAMD1A-203ENST00000424536 CCDC180Q9P1Z9 1646 aa29.89■■■□□ 2.38
GRAMD1A-203ENST00000424536 ABCC9O60706 1549 aa29.39■■■□□ 2.3
GRAMD1A-203ENST00000424536 RB1CC1Q8TDY2 1594 aa28.27■■■□□ 2.12
GRAMD1A-203ENST00000424536 NACADO15069 1562 aa28.18■■■□□ 2.1
GRAMD1A-203ENST00000424536 DCAF8L2P0C7V8 631 aa28.12■■■□□ 2.09
GRAMD1A-203ENST00000424536 MYO15BQ96JP2 1530 aa27.94■■■□□ 2.06
GRAMD1A-203ENST00000424536 ZCCHC6Q5VYS8 1495 aaKnown RBP27.81■■■□□ 2.04
GRAMD1A-203ENST00000424536 DCAF1Q9Y4B6 1507 aa27.72■■■□□ 2.03
GRAMD1A-203ENST00000424536 UNC13AQ9UPW8 1703 aa27.5■■□□□ 1.99
GRAMD1A-203ENST00000424536 PABPN1Q86U42 306 aaKnown RBP eCLIP27.41■■□□□ 1.982e-14■■□□□ 11.6
GRAMD1A-203ENST00000424536 BICRAQ9NZM4 1560 aa27.27■■□□□ 1.96
GRAMD1A-203ENST00000424536 SCRIBQ14160 1630 aa27.18■■□□□ 1.94
GRAMD1A-203ENST00000424536 SHROOM4Q9ULL8 1493 aa27.15■■□□□ 1.94
GRAMD1A-203ENST00000424536 DNAJC5BQ9UF47 199 aa27.08■■□□□ 1.93
GRAMD1A-203ENST00000424536 EIF4G1Q04637 1599 aaKnown RBP26.64■■□□□ 1.86
GRAMD1A-203ENST00000424536 CC2D2AQ9P2K1 1620 aa26.58■■□□□ 1.85
GRAMD1A-203ENST00000424536 CECR2Q9BXF3 1484 aa26.47■■□□□ 1.83
GRAMD1A-203ENST00000424536 SMARCA4P51532 1647 aa26■■□□□ 1.75
GRAMD1A-203ENST00000424536 BAZ1AQ9NRL2 1556 aaPredicted RBP26■■□□□ 1.75
GRAMD1A-203ENST00000424536 NCAPD3P42695 1498 aa25.98■■□□□ 1.75
GRAMD1A-203ENST00000424536 SMARCA2P51531 1590 aa25.95■■□□□ 1.75
GRAMD1A-203ENST00000424536 ATAD2BQ9ULI0 1458 aa25.92■■□□□ 1.74
GRAMD1A-203ENST00000424536 HMGXB3Q12766 1538 aa25.83■■□□□ 1.72
GRAMD1A-203ENST00000424536 PEG3Q9GZU2 1588 aa25.77■■□□□ 1.72
GRAMD1A-203ENST00000424536 BAZ1BQ9UIG0 1483 aaKnown RBP25.74■■□□□ 1.71
GRAMD1A-203ENST00000424536 MROH2BQ7Z745 1585 aa25.73■■□□□ 1.71
GRAMD1A-203ENST00000424536 WIZO95785 1651 aa25.45■■□□□ 1.66
GRAMD1A-203ENST00000424536 ERCC6Q03468 1493 aa25.44■■□□□ 1.66
GRAMD1A-203ENST00000424536 RSF1Q96T23 1441 aaPredicted RBP25.38■■□□□ 1.65
GRAMD1A-203ENST00000424536 LAMC3Q9Y6N6 1575 aa25.35■■□□□ 1.65
GRAMD1A-203ENST00000424536 NESP48681 1621 aa25.31■■□□□ 1.64
GRAMD1A-203ENST00000424536 CUX2O14529 1486 aa25.25■■□□□ 1.63
GRAMD1A-203ENST00000424536 TOP2AP11388 1531 aaKnown RBP25.22■■□□□ 1.63
GRAMD1A-203ENST00000424536 PDS5BQ9NTI5 1447 aa25.22■■□□□ 1.63
GRAMD1A-203ENST00000424536 CADPSQ9ULU8 1353 aa25.21■■□□□ 1.63
GRAMD1A-203ENST00000424536 KIF21AQ7Z4S6 1674 aa25.05■■□□□ 1.6
GRAMD1A-203ENST00000424536 THOC2Q8NI27 1593 aaKnown RBP25.01■■□□□ 1.59
GRAMD1A-203ENST00000424536 CFTRP13569 1480 aa24.99■■□□□ 1.59
GRAMD1A-203ENST00000424536 CEP164Q9UPV0 1460 aa24.93■■□□□ 1.58
GRAMD1A-203ENST00000424536 MRC2Q9UBG0 1479 aa24.92■■□□□ 1.58
GRAMD1A-203ENST00000424536 CCDC88BA6NC98 1476 aa24.9■■□□□ 1.58
GRAMD1A-203ENST00000424536 FANCD2Q9BXW9 1451 aa24.9■■□□□ 1.58
GRAMD1A-203ENST00000424536 WDR62O43379 1518 aa24.81■■□□□ 1.56
GRAMD1A-203ENST00000424536 PRDM2Q13029 1718 aa24.81■■□□□ 1.56
GRAMD1A-203ENST00000424536 DNAJC5Q9H3Z4 198 aa24.69■■□□□ 1.54
GRAMD1A-203ENST00000424536 SUPT5HO00267 1087 aaKnown RBP24.63■■□□□ 1.53
GRAMD1A-203ENST00000424536 URB2Q14146 1524 aaKnown RBP24.61■■□□□ 1.53
GRAMD1A-203ENST00000424536 ABCC8Q09428 1581 aa24.59■■□□□ 1.53
GRAMD1A-203ENST00000424536 TOPBP1Q92547 1522 aa24.47■■□□□ 1.51
GRAMD1A-203ENST00000424536 DNMBPQ6XZF7 1577 aa24.44■■□□□ 1.5
GRAMD1A-203ENST00000424536 IFT140Q96RY7 1462 aa24.42■■□□□ 1.5
GRAMD1A-203ENST00000424536 POLA1P09884 1462 aaPredicted RBP24.23■■□□□ 1.47
GRAMD1A-203ENST00000424536 ZNF608Q9ULD9 1512 aaPredicted RBP24.21■■□□□ 1.47
GRAMD1A-203ENST00000424536 OSCARQ8IYS5 282 aa24.19■■□□□ 1.46
GRAMD1A-203ENST00000424536 SOGA1O94964 1423 aa24.18■■□□□ 1.46
GRAMD1A-203ENST00000424536 TARBP1Q13395 1621 aaKnown RBP24.18■■□□□ 1.46
GRAMD1A-203ENST00000424536 EIF4G3O43432 1585 aaKnown RBP24.16■■□□□ 1.46
GRAMD1A-203ENST00000424536 CUX1P39880 1505 aa24.15■■□□□ 1.46
GRAMD1A-203ENST00000424536 FGD5Q6ZNL6 1462 aa24.15■■□□□ 1.46
GRAMD1A-203ENST00000424536 WDR97A6NE52 1622 aa24.11■■□□□ 1.45
GRAMD1A-203ENST00000424536 RAD54L2Q9Y4B4 1467 aa24.1■■□□□ 1.45
GRAMD1A-203ENST00000424536 AQRO60306 1485 aaKnown RBP eCLIP24.09■■□□□ 1.453e-7■■■■■ 68.3
GRAMD1A-203ENST00000424536 TDRD9Q8NDG6 1382 aaKnown RBP24.03■■□□□ 1.44
GRAMD1A-203ENST00000424536 WRNQ14191 1432 aaPredicted RBP eCLIP24■■□□□ 1.439e-6■■■■■ 50.1
GRAMD1A-203ENST00000424536 TOP2BQ02880 1626 aa23.95■■□□□ 1.42
GRAMD1A-203ENST00000424536 FBLN2P98095 1184 aa23.94■■□□□ 1.42
GRAMD1A-203ENST00000424536 BIVM-ERCC5R4GMW8 1640 aa23.94■■□□□ 1.42
GRAMD1A-203ENST00000424536 GRIN2BQ13224 1484 aa23.94■■□□□ 1.42
GRAMD1A-203ENST00000424536 ABCA10Q8WWZ4 1543 aa23.93■■□□□ 1.42
GRAMD1A-203ENST00000424536 MAGI1Q96QZ7 1491 aaPredicted RBP23.9■■□□□ 1.42
GRAMD1A-203ENST00000424536 GAPVD1Q14C86 1478 aa23.89■■□□□ 1.42
GRAMD1A-203ENST00000424536 CHD1O14646 1710 aa23.89■■□□□ 1.41
GRAMD1A-203ENST00000424536 SNAPC4Q5SXM2 1469 aa23.87■■□□□ 1.41
GRAMD1A-203ENST00000424536 CHMP7Q8WUX9 453 aaPredicted RBP23.86■■□□□ 1.41
GRAMD1A-203ENST00000424536 SYNJ1O43426 1573 aa23.86■■□□□ 1.41
GRAMD1A-203ENST00000424536 PBRM1Q86U86 1689 aa23.83■■□□□ 1.4
GRAMD1A-203ENST00000424536 ABCA5Q8WWZ7 1642 aa23.81■■□□□ 1.4
GRAMD1A-203ENST00000424536 TRIM41Q8WV44 630 aa23.8■■□□□ 1.4
GRAMD1A-203ENST00000424536 SYNJ2O15056 1496 aa23.8■■□□□ 1.4
GRAMD1A-203ENST00000424536 RIMBP3CA6NJZ7 1639 aa23.72■■□□□ 1.39
GRAMD1A-203ENST00000424536 RIMBP3BA6NNM3 1639 aa23.72■■□□□ 1.39
GRAMD1A-203ENST00000424536 RIMBP3Q9UFD9 1639 aa23.72■■□□□ 1.39
GRAMD1A-203ENST00000424536 ARHGEF11O15085 1522 aa23.7■■□□□ 1.38
GRAMD1A-203ENST00000424536 ERICH3Q5RHP9 1530 aa23.67■■□□□ 1.38
GRAMD1A-203ENST00000424536 FHAD1B1AJZ9 1412 aa23.63■■□□□ 1.37
GRAMD1A-203ENST00000424536 CLASP1Q7Z460 1538 aa23.63■■□□□ 1.37
GRAMD1A-203ENST00000424536 ADAMTS12P58397 1594 aa23.61■■□□□ 1.37
GRAMD1A-203ENST00000424536 GRIN2AQ12879 1464 aa23.6■■□□□ 1.37
GRAMD1A-203ENST00000424536 KIF27Q86VH2 1401 aa23.56■■□□□ 1.36
GRAMD1A-203ENST00000424536 CYB5RLQ6IPT4 315 aa23.54■■□□□ 1.36
GRAMD1A-203ENST00000424536 NUP160Q12769 1436 aa23.49■■□□□ 1.35
GRAMD1A-203ENST00000424536 ARAP1Q96P48 1450 aa23.47■■□□□ 1.35
GRAMD1A-203ENST00000424536 CEP170Q5SW79 1584 aa23.44■■□□□ 1.34
GRAMD1A-203ENST00000424536 CUL7Q14999 1698 aa23.42■■□□□ 1.34
GRAMD1A-203ENST00000424536 IGF1RP08069 1367 aa23.41■■□□□ 1.34
GRAMD1A-203ENST00000424536 CARMIL1Q5VZK9 1371 aa23.32■■□□□ 1.32
GRAMD1A-203ENST00000424536 SHROOM2Q13796 1616 aa23.32■■□□□ 1.32
GRAMD1A-203ENST00000424536 JPH4Q96JJ6 628 aa23.3■■□□□ 1.32
GRAMD1A-203ENST00000424536 RUSC2Q8N2Y8 1516 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms