RNA–Protein interactions for RNA: ENST00000472272.1

LSS-207, Transcript of lanosterol synthase, humanhuman

TSL 2

Gene LSS, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-207ENST00000472272 NISCHQ9Y2I1 1504 aa39.09■■■■□ 3.85
LSS-207ENST00000472272 ABCC9O60706 1549 aa35.11■■■■□ 3.21
LSS-207ENST00000472272 CCDC180Q9P1Z9 1646 aa35.05■■■■□ 3.2
LSS-207ENST00000472272 RB1CC1Q8TDY2 1594 aa33.39■■■□□ 2.94
LSS-207ENST00000472272 NACADO15069 1562 aa33.16■■■□□ 2.9
LSS-207ENST00000472272 DCAF8L2P0C7V8 631 aa33.1■■■□□ 2.89
LSS-207ENST00000472272 DNAJC5BQ9UF47 199 aa32.94■■■□□ 2.86
LSS-207ENST00000472272 PABPN1Q86U42 306 aaKnown RBP eCLIP32.71■■■□□ 2.83
LSS-207ENST00000472272 MYO15BQ96JP2 1530 aa32.69■■■□□ 2.82
LSS-207ENST00000472272 UNC13AQ9UPW8 1703 aa32.61■■■□□ 2.81
LSS-207ENST00000472272 BICRAQ9NZM4 1560 aa32.4■■■□□ 2.78
LSS-207ENST00000472272 ZCCHC6Q5VYS8 1495 aaKnown RBP32.37■■■□□ 2.77
LSS-207ENST00000472272 DCAF1Q9Y4B6 1507 aa32.26■■■□□ 2.76
LSS-207ENST00000472272 SCRIBQ14160 1630 aa31.97■■■□□ 2.71
LSS-207ENST00000472272 SHROOM4Q9ULL8 1493 aa31.96■■■□□ 2.71
LSS-207ENST00000472272 CC2D2AQ9P2K1 1620 aa31.69■■■□□ 2.66
LSS-207ENST00000472272 EIF4G1Q04637 1599 aaKnown RBP31.62■■■□□ 2.65
LSS-207ENST00000472272 CECR2Q9BXF3 1484 aa31.62■■■□□ 2.65
LSS-207ENST00000472272 NCAPD3P42695 1498 aa30.63■■■□□ 2.49
LSS-207ENST00000472272 ATAD2BQ9ULI0 1458 aa30.53■■■□□ 2.48
LSS-207ENST00000472272 SMARCA4P51532 1647 aa30.48■■■□□ 2.47
LSS-207ENST00000472272 SMARCA2P51531 1590 aa30.45■■■□□ 2.46
LSS-207ENST00000472272 HMGXB3Q12766 1538 aa30.37■■■□□ 2.45
LSS-207ENST00000472272 BAZ1AQ9NRL2 1556 aaPredicted RBP30.34■■■□□ 2.45
LSS-207ENST00000472272 ERCC6Q03468 1493 aa30.32■■■□□ 2.44
LSS-207ENST00000472272 DNAJC5Q9H3Z4 198 aa30.27■■■□□ 2.44
LSS-207ENST00000472272 BAZ1BQ9UIG0 1483 aaKnown RBP30.25■■■□□ 2.43
LSS-207ENST00000472272 CUX2O14529 1486 aa30.24■■■□□ 2.43
LSS-207ENST00000472272 PEG3Q9GZU2 1588 aa30.17■■■□□ 2.42
LSS-207ENST00000472272 NESP48681 1621 aa30.14■■■□□ 2.42
LSS-207ENST00000472272 MROH2BQ7Z745 1585 aa30.12■■■□□ 2.41
LSS-207ENST00000472272 LAMC3Q9Y6N6 1575 aa29.93■■■□□ 2.38
LSS-207ENST00000472272 THOC2Q8NI27 1593 aaKnown RBP29.81■■■□□ 2.36
LSS-207ENST00000472272 PDS5BQ9NTI5 1447 aa29.79■■■□□ 2.36
LSS-207ENST00000472272 WIZO95785 1651 aa29.76■■■□□ 2.35
LSS-207ENST00000472272 KIF21AQ7Z4S6 1674 aa29.74■■■□□ 2.35
LSS-207ENST00000472272 CADPSQ9ULU8 1353 aa29.71■■■□□ 2.35
LSS-207ENST00000472272 MRC2Q9UBG0 1479 aa29.5■■■□□ 2.31
LSS-207ENST00000472272 RSF1Q96T23 1441 aaPredicted RBP29.5■■■□□ 2.31
LSS-207ENST00000472272 WDR62O43379 1518 aa29.41■■■□□ 2.3
LSS-207ENST00000472272 CEP164Q9UPV0 1460 aa29.39■■■□□ 2.3
LSS-207ENST00000472272 TOP2AP11388 1531 aaKnown RBP29.37■■■□□ 2.29
LSS-207ENST00000472272 FANCD2Q9BXW9 1451 aa29.36■■■□□ 2.29
LSS-207ENST00000472272 CFTRP13569 1480 aa29.35■■■□□ 2.29
LSS-207ENST00000472272 URB2Q14146 1524 aaKnown RBP29.1■■■□□ 2.25
LSS-207ENST00000472272 CCDC88BA6NC98 1476 aa29.06■■■□□ 2.24
LSS-207ENST00000472272 PRDM2Q13029 1718 aa29.03■■■□□ 2.24
LSS-207ENST00000472272 TRIM41Q8WV44 630 aa28.97■■■□□ 2.23
LSS-207ENST00000472272 OSCARQ8IYS5 282 aa28.92■■■□□ 2.22
LSS-207ENST00000472272 IFT140Q96RY7 1462 aa28.81■■■□□ 2.2
LSS-207ENST00000472272 TOPBP1Q92547 1522 aa28.8■■■□□ 2.2
LSS-207ENST00000472272 ZNF608Q9ULD9 1512 aaPredicted RBP28.76■■■□□ 2.19
LSS-207ENST00000472272 ABCC8Q09428 1581 aa28.75■■■□□ 2.19
LSS-207ENST00000472272 DNMBPQ6XZF7 1577 aa28.69■■■□□ 2.18
LSS-207ENST00000472272 EIF4G3O43432 1585 aaKnown RBP28.58■■■□□ 2.17
LSS-207ENST00000472272 TARBP1Q13395 1621 aaKnown RBP28.53■■■□□ 2.16
LSS-207ENST00000472272 AQRO60306 1485 aaKnown RBP eCLIP28.52■■■□□ 2.168e-13■■■■■ 29.9
LSS-207ENST00000472272 POLA1P09884 1462 aaPredicted RBP28.5■■■□□ 2.15
LSS-207ENST00000472272 RIMBP3CA6NJZ7 1639 aa28.48■■■□□ 2.15
LSS-207ENST00000472272 RIMBP3BA6NNM3 1639 aa28.48■■■□□ 2.15
LSS-207ENST00000472272 RIMBP3Q9UFD9 1639 aa28.48■■■□□ 2.15
LSS-207ENST00000472272 RAD54L2Q9Y4B4 1467 aa28.41■■■□□ 2.14
LSS-207ENST00000472272 SOGA1O94964 1423 aa28.41■■■□□ 2.14
LSS-207ENST00000472272 ARHGEF11O15085 1522 aa28.4■■■□□ 2.14
LSS-207ENST00000472272 FBLN2P98095 1184 aa28.39■■■□□ 2.14
LSS-207ENST00000472272 CHD1O14646 1710 aa28.38■■■□□ 2.13
LSS-207ENST00000472272 TDRD9Q8NDG6 1382 aaKnown RBP28.36■■■□□ 2.13
LSS-207ENST00000472272 FGD5Q6ZNL6 1462 aa28.34■■■□□ 2.13
LSS-207ENST00000472272 CUX1P39880 1505 aa28.29■■■□□ 2.12
LSS-207ENST00000472272 SUPT5HO00267 1087 aaKnown RBP28.27■■■□□ 2.12
LSS-207ENST00000472272 CYB5RLQ6IPT4 315 aa28.25■■■□□ 2.11
LSS-207ENST00000472272 WDR97A6NE52 1622 aa28.23■■■□□ 2.11
LSS-207ENST00000472272 SNAPC4Q5SXM2 1469 aa28.21■■■□□ 2.11
LSS-207ENST00000472272 CHMP7Q8WUX9 453 aaPredicted RBP28.16■■■□□ 2.1
LSS-207ENST00000472272 GRIN2BQ13224 1484 aa28.15■■■□□ 2.1
LSS-207ENST00000472272 MAGI1Q96QZ7 1491 aaPredicted RBP28.14■■■□□ 2.09
LSS-207ENST00000472272 ARAP1Q96P48 1450 aa28.11■■■□□ 2.09
LSS-207ENST00000472272 SYNJ1O43426 1573 aa28.05■■■□□ 2.08
LSS-207ENST00000472272 GAPVD1Q14C86 1478 aa28.05■■■□□ 2.08
LSS-207ENST00000472272 SYNJ2O15056 1496 aa28.04■■■□□ 2.08
LSS-207ENST00000472272 CLASP1Q7Z460 1538 aa28.03■■■□□ 2.08
LSS-207ENST00000472272 ABCA10Q8WWZ4 1543 aa28.01■■■□□ 2.07
LSS-207ENST00000472272 PBRM1Q86U86 1689 aa28■■■□□ 2.07
LSS-207ENST00000472272 TRHP20396 242 aaPredicted RBP27.96■■■□□ 2.07
LSS-207ENST00000472272 ABCA5Q8WWZ7 1642 aa27.94■■■□□ 2.06
LSS-207ENST00000472272 WRNQ14191 1432 aaPredicted RBP eCLIP27.92■■■□□ 2.06
LSS-207ENST00000472272 TOP2BQ02880 1626 aa27.84■■■□□ 2.05
LSS-207ENST00000472272 BIVM-ERCC5R4GMW8 1640 aa27.83■■■□□ 2.05
LSS-207ENST00000472272 GRIN2AQ12879 1464 aa27.77■■■□□ 2.04
LSS-207ENST00000472272 ADAMTS12P58397 1594 aa27.73■■■□□ 2.03
LSS-207ENST00000472272 FHAD1B1AJZ9 1412 aa27.69■■■□□ 2.02
LSS-207ENST00000472272 NUP160Q12769 1436 aa27.67■■■□□ 2.02
LSS-207ENST00000472272 CEP170Q5SW79 1584 aa27.65■■■□□ 2.02
LSS-207ENST00000472272 ERICH3Q5RHP9 1530 aa27.65■■■□□ 2.02
LSS-207ENST00000472272 ERCC6L2Q5T890 1561 aa27.61■■■□□ 2.01
LSS-207ENST00000472272 SHROOM2Q13796 1616 aa27.53■■■□□ 2
LSS-207ENST00000472272 JPH4Q96JJ6 628 aa27.45■■□□□ 1.98
LSS-207ENST00000472272 PRG4Q92954 1404 aaPredicted RBP27.43■■□□□ 1.98
LSS-207ENST00000472272 RUSC2Q8N2Y8 1516 aa27.34■■□□□ 1.97
LSS-207ENST00000472272 KIF27Q86VH2 1401 aa27.33■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms