RNA–Protein interactions for RNA: ENST00000529344.5

PPP6R3-217, Transcript of protein phosphatase 6 regulatory subunit 3, humanhuman

TSL 4

Gene PPP6R3, Length 603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP6R3-217ENST00000529344 NISCHQ9Y2I1 1504 aa38.48■■■■□ 3.75
PPP6R3-217ENST00000529344 CCDC180Q9P1Z9 1646 aa34.14■■■■□ 3.06
PPP6R3-217ENST00000529344 ABCC9O60706 1549 aa33.67■■■□□ 2.98
PPP6R3-217ENST00000529344 DCAF8L2P0C7V8 631 aa32.31■■■□□ 2.76
PPP6R3-217ENST00000529344 RB1CC1Q8TDY2 1594 aa32.24■■■□□ 2.75
PPP6R3-217ENST00000529344 NACADO15069 1562 aa32.19■■■□□ 2.74
PPP6R3-217ENST00000529344 ZCCHC6Q5VYS8 1495 aaKnown RBP32.01■■■□□ 2.71
PPP6R3-217ENST00000529344 MYO15BQ96JP2 1530 aa31.95■■■□□ 2.71
PPP6R3-217ENST00000529344 DCAF1Q9Y4B6 1507 aa31.79■■■□□ 2.68
PPP6R3-217ENST00000529344 PABPN1Q86U42 306 aaKnown RBP eCLIP31.53■■■□□ 2.64
PPP6R3-217ENST00000529344 UNC13AQ9UPW8 1703 aa31.46■■■□□ 2.63
PPP6R3-217ENST00000529344 BICRAQ9NZM4 1560 aa31.33■■■□□ 2.61
PPP6R3-217ENST00000529344 SCRIBQ14160 1630 aa31.24■■■□□ 2.59
PPP6R3-217ENST00000529344 DNAJC5BQ9UF47 199 aa31.12■■■□□ 2.57
PPP6R3-217ENST00000529344 SHROOM4Q9ULL8 1493 aa30.89■■■□□ 2.54
PPP6R3-217ENST00000529344 EIF4G1Q04637 1599 aaKnown RBP30.49■■■□□ 2.47
PPP6R3-217ENST00000529344 CC2D2AQ9P2K1 1620 aa30.4■■■□□ 2.46
PPP6R3-217ENST00000529344 CECR2Q9BXF3 1484 aa30.25■■■□□ 2.43
PPP6R3-217ENST00000529344 SMARCA4P51532 1647 aa29.85■■■□□ 2.37
PPP6R3-217ENST00000529344 BAZ1AQ9NRL2 1556 aaPredicted RBP29.79■■■□□ 2.36
PPP6R3-217ENST00000529344 ATAD2BQ9ULI0 1458 aa29.78■■■□□ 2.36
PPP6R3-217ENST00000529344 NCAPD3P42695 1498 aa29.76■■■□□ 2.35
PPP6R3-217ENST00000529344 MROH2BQ7Z745 1585 aa29.69■■■□□ 2.34
PPP6R3-217ENST00000529344 SMARCA2P51531 1590 aa29.66■■■□□ 2.34
PPP6R3-217ENST00000529344 PEG3Q9GZU2 1588 aa29.54■■■□□ 2.32
PPP6R3-217ENST00000529344 HMGXB3Q12766 1538 aa29.53■■■□□ 2.32
PPP6R3-217ENST00000529344 BAZ1BQ9UIG0 1483 aaKnown RBP29.48■■■□□ 2.31
PPP6R3-217ENST00000529344 RSF1Q96T23 1441 aaPredicted RBP29.33■■■□□ 2.29
PPP6R3-217ENST00000529344 WIZO95785 1651 aa29.32■■■□□ 2.28
PPP6R3-217ENST00000529344 NESP48681 1621 aa29.12■■■□□ 2.25
PPP6R3-217ENST00000529344 ERCC6Q03468 1493 aa28.98■■■□□ 2.23
PPP6R3-217ENST00000529344 TOP2AP11388 1531 aaKnown RBP28.98■■■□□ 2.23
PPP6R3-217ENST00000529344 LAMC3Q9Y6N6 1575 aa28.92■■■□□ 2.22
PPP6R3-217ENST00000529344 CADPSQ9ULU8 1353 aa28.91■■■□□ 2.22
PPP6R3-217ENST00000529344 PDS5BQ9NTI5 1447 aa28.79■■■□□ 2.2
PPP6R3-217ENST00000529344 CCDC88BA6NC98 1476 aa28.72■■■□□ 2.19
PPP6R3-217ENST00000529344 CFTRP13569 1480 aa28.7■■■□□ 2.18
PPP6R3-217ENST00000529344 CUX2O14529 1486 aa28.69■■■□□ 2.18
PPP6R3-217ENST00000529344 KIF21AQ7Z4S6 1674 aa28.65■■■□□ 2.18
PPP6R3-217ENST00000529344 THOC2Q8NI27 1593 aaKnown RBP28.6■■■□□ 2.17
PPP6R3-217ENST00000529344 SUPT5HO00267 1087 aaKnown RBP28.56■■■□□ 2.16
PPP6R3-217ENST00000529344 FANCD2Q9BXW9 1451 aa28.56■■■□□ 2.16
PPP6R3-217ENST00000529344 CEP164Q9UPV0 1460 aa28.5■■■□□ 2.15
PPP6R3-217ENST00000529344 MRC2Q9UBG0 1479 aa28.49■■■□□ 2.15
PPP6R3-217ENST00000529344 WDR62O43379 1518 aa28.38■■■□□ 2.13
PPP6R3-217ENST00000529344 PRDM2Q13029 1718 aa28.29■■■□□ 2.12
PPP6R3-217ENST00000529344 URB2Q14146 1524 aaKnown RBP28.29■■■□□ 2.12
PPP6R3-217ENST00000529344 TOPBP1Q92547 1522 aa28.08■■■□□ 2.09
PPP6R3-217ENST00000529344 DNAJC5Q9H3Z4 198 aa28.06■■■□□ 2.08
PPP6R3-217ENST00000529344 ABCC8Q09428 1581 aa28.03■■■□□ 2.08
PPP6R3-217ENST00000529344 DNMBPQ6XZF7 1577 aa28■■■□□ 2.07
PPP6R3-217ENST00000529344 IFT140Q96RY7 1462 aa27.92■■■□□ 2.06
PPP6R3-217ENST00000529344 ZNF608Q9ULD9 1512 aaPredicted RBP27.86■■■□□ 2.05
PPP6R3-217ENST00000529344 CUX1P39880 1505 aa27.85■■■□□ 2.05
PPP6R3-217ENST00000529344 POLA1P09884 1462 aaPredicted RBP27.84■■■□□ 2.05
PPP6R3-217ENST00000529344 RAD54L2Q9Y4B4 1467 aa27.77■■■□□ 2.04
PPP6R3-217ENST00000529344 SOGA1O94964 1423 aa27.76■■■□□ 2.04
PPP6R3-217ENST00000529344 TARBP1Q13395 1621 aaKnown RBP27.76■■■□□ 2.03
PPP6R3-217ENST00000529344 FGD5Q6ZNL6 1462 aa27.76■■■□□ 2.03
PPP6R3-217ENST00000529344 AQRO60306 1485 aaKnown RBP eCLIP27.7■■■□□ 2.031e-6■□□□□ 11.2
PPP6R3-217ENST00000529344 TDRD9Q8NDG6 1382 aaKnown RBP27.65■■■□□ 2.02
PPP6R3-217ENST00000529344 EIF4G3O43432 1585 aaKnown RBP27.65■■■□□ 2.02
PPP6R3-217ENST00000529344 WRNQ14191 1432 aaPredicted RBP eCLIP27.62■■■□□ 2.01
PPP6R3-217ENST00000529344 OSCARQ8IYS5 282 aa27.58■■■□□ 2.01
PPP6R3-217ENST00000529344 SYNJ1O43426 1573 aa27.54■■■□□ 2
PPP6R3-217ENST00000529344 TOP2BQ02880 1626 aa27.52■■■□□ 2
PPP6R3-217ENST00000529344 BIVM-ERCC5R4GMW8 1640 aa27.49■■□□□ 1.99
PPP6R3-217ENST00000529344 ABCA10Q8WWZ4 1543 aa27.46■■□□□ 1.99
PPP6R3-217ENST00000529344 WDR97A6NE52 1622 aa27.45■■□□□ 1.99
PPP6R3-217ENST00000529344 GAPVD1Q14C86 1478 aa27.41■■□□□ 1.98
PPP6R3-217ENST00000529344 FBLN2P98095 1184 aa27.41■■□□□ 1.98
PPP6R3-217ENST00000529344 GRIN2BQ13224 1484 aa27.4■■□□□ 1.98
PPP6R3-217ENST00000529344 SNAPC4Q5SXM2 1469 aa27.4■■□□□ 1.98
PPP6R3-217ENST00000529344 ABCA5Q8WWZ7 1642 aa27.33■■□□□ 1.97
PPP6R3-217ENST00000529344 MAGI1Q96QZ7 1491 aaPredicted RBP27.32■■□□□ 1.96
PPP6R3-217ENST00000529344 CHMP7Q8WUX9 453 aaPredicted RBP27.3■■□□□ 1.96
PPP6R3-217ENST00000529344 CHD1O14646 1710 aa27.3■■□□□ 1.96
PPP6R3-217ENST00000529344 PBRM1Q86U86 1689 aa27.25■■□□□ 1.95
PPP6R3-217ENST00000529344 SYNJ2O15056 1496 aa27.23■■□□□ 1.95
PPP6R3-217ENST00000529344 AEBP2Q6ZN18 517 aaPredicted RBP27.14■■□□□ 1.94
PPP6R3-217ENST00000529344 ERICH3Q5RHP9 1530 aa27.11■■□□□ 1.93
PPP6R3-217ENST00000529344 TRIM41Q8WV44 630 aa27.1■■□□□ 1.93
PPP6R3-217ENST00000529344 ADAMTS12P58397 1594 aa27.09■■□□□ 1.93
PPP6R3-217ENST00000529344 FHAD1B1AJZ9 1412 aa27.08■■□□□ 1.93
PPP6R3-217ENST00000529344 ARHGEF11O15085 1522 aa27.06■■□□□ 1.92
PPP6R3-217ENST00000529344 RIMBP3CA6NJZ7 1639 aa27.06■■□□□ 1.92
PPP6R3-217ENST00000529344 RIMBP3BA6NNM3 1639 aa27.06■■□□□ 1.92
PPP6R3-217ENST00000529344 RIMBP3Q9UFD9 1639 aa27.06■■□□□ 1.92
PPP6R3-217ENST00000529344 CLASP1Q7Z460 1538 aa27.06■■□□□ 1.92
PPP6R3-217ENST00000529344 KIF27Q86VH2 1401 aa27.05■■□□□ 1.92
PPP6R3-217ENST00000529344 GRIN2AQ12879 1464 aa27.05■■□□□ 1.92
PPP6R3-217ENST00000529344 IGF1RP08069 1367 aa27.02■■□□□ 1.92
PPP6R3-217ENST00000529344 NUP160Q12769 1436 aa26.95■■□□□ 1.9
PPP6R3-217ENST00000529344 CYB5RLQ6IPT4 315 aa26.92■■□□□ 1.9
PPP6R3-217ENST00000529344 CEP170Q5SW79 1584 aa26.92■■□□□ 1.9
PPP6R3-217ENST00000529344 ARAP1Q96P48 1450 aa26.87■■□□□ 1.89
PPP6R3-217ENST00000529344 RUSC2Q8N2Y8 1516 aa26.85■■□□□ 1.89
PPP6R3-217ENST00000529344 CARMIL1Q5VZK9 1371 aa26.83■■□□□ 1.88
PPP6R3-217ENST00000529344 CUL7Q14999 1698 aa26.79■■□□□ 1.88
PPP6R3-217ENST00000529344 JPH4Q96JJ6 628 aa26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms