RNA–Protein interactions for RNA: ENST00000367186.7

SCAF8-202, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 2 BASIC

Gene SCAF8, Length 4,908 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-202ENST00000367186 DCAF8L2P0C7V8 631 aa18.17■□□□□ 0.5
SCAF8-202ENST00000367186 NISCHQ9Y2I1 1504 aa17.57■□□□□ 0.4
SCAF8-202ENST00000367186 SUPT5HO00267 1087 aaKnown RBP17.35■□□□□ 0.37
SCAF8-202ENST00000367186 EHMT2Q96KQ7 1210 aa17.2■□□□□ 0.34
SCAF8-202ENST00000367186 SHROOM4Q9ULL8 1493 aa16.8■□□□□ 0.28
SCAF8-202ENST00000367186 PELP1Q8IZL8 1130 aaKnown RBP16.63■□□□□ 0.25
SCAF8-202ENST00000367186 TTBK1Q5TCY1 1321 aaPredicted RBP16.6■□□□□ 0.25
SCAF8-202ENST00000367186 FAM9AQ8IZU1 332 aaPredicted RBP16.51■□□□□ 0.23
SCAF8-202ENST00000367186 PCGF6Q9BYE7 350 aa16.48■□□□□ 0.23
SCAF8-202ENST00000367186 APLP2Q06481 763 aa16.37■□□□□ 0.21
SCAF8-202ENST00000367186 RANGAP1P46060 587 aaPredicted RBP16.25■□□□□ 0.19
SCAF8-202ENST00000367186 ERICH6Q7L0X2 663 aa16.16■□□□□ 0.18
SCAF8-202ENST00000367186 CENPBP07199 599 aaPredicted RBP16.09■□□□□ 0.17
SCAF8-202ENST00000367186 CCER1Q8TC90 406 aaPredicted RBP16.06■□□□□ 0.16
SCAF8-202ENST00000367186 YTHDC1Q96MU7 727 aaKnown RBP16.06■□□□□ 0.16
SCAF8-202ENST00000367186 ATP1B4Q9UN42 357 aaPredicted RBP15.97■□□□□ 0.15
SCAF8-202ENST00000367186 PPARGC1BQ86YN6 1023 aaKnown RBP15.91■□□□□ 0.14
SCAF8-202ENST00000367186 TRIM41Q8WV44 630 aa15.81■□□□□ 0.12
SCAF8-202ENST00000367186 NEFLP07196 543 aa15.78■□□□□ 0.12
SCAF8-202ENST00000367186 ZEB1P37275 1124 aaPredicted RBP15.77■□□□□ 0.12
SCAF8-202ENST00000367186 UBTFP17480 764 aaKnown RBP15.76■□□□□ 0.11
SCAF8-202ENST00000367186 MYT1Q01538 1121 aa15.75■□□□□ 0.11
SCAF8-202ENST00000367186 CNGB1Q14028 1251 aaPredicted RBP15.62■□□□□ 0.09
SCAF8-202ENST00000367186 POLR3GLQ9BT43 218 aa15.54■□□□□ 0.08
SCAF8-202ENST00000367186 ITGAEP38570 1179 aa15.53■□□□□ 0.08
SCAF8-202ENST00000367186 HRCP23327 699 aa15.49■□□□□ 0.07
SCAF8-202ENST00000367186 LOC105371045A0A1W2PR82 267 aa15.4■□□□□ 0.06
SCAF8-202ENST00000367186 DAXXQ9UER7 740 aaPredicted RBP15.39■□□□□ 0.05
SCAF8-202ENST00000367186 TRIM26Q12899 539 aaPredicted RBP15.36■□□□□ 0.05
SCAF8-202ENST00000367186 HNRNPUL2Q1KMD3 747 aaKnown RBP15.36■□□□□ 0.05
SCAF8-202ENST00000367186 MYT1LQ9UL68 1186 aa15.26■□□□□ 0.03
SCAF8-202ENST00000367186 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.26■□□□□ 0.03
SCAF8-202ENST00000367186 CCDC180Q9P1Z9 1646 aa15.24■□□□□ 0.03
SCAF8-202ENST00000367186 CHIC1Q5VXU3 224 aa15.24■□□□□ 0.03
SCAF8-202ENST00000367186 BCANQ96GW7 911 aa15.14■□□□□ 0.01
SCAF8-202ENST00000367186 SLC4A1APQ9BWU0 796 aaKnown RBP15.13■□□□□ 0.01
SCAF8-202ENST00000367186 CLSPNQ9HAW4 1339 aa15.12■□□□□ 0.01
SCAF8-202ENST00000367186 DIEXFQ68CQ4 756 aaKnown RBP15.1■□□□□ 0.01
SCAF8-202ENST00000367186 RTL5Q5HYW3 569 aaPredicted RBP15.09■□□□□ 0.01
SCAF8-202ENST00000367186 ZNF316A6NFI3 1004 aaPredicted RBP15.02■□□□□ -0
SCAF8-202ENST00000367186 GTF3C3Q9Y5Q9 886 aa14.99□□□□□ -0.01
SCAF8-202ENST00000367186 BCL11AQ9H165 835 aa14.96□□□□□ -0.01
SCAF8-202ENST00000367186 NEUROD1Q13562 356 aa14.93□□□□□ -0.02
SCAF8-202ENST00000367186 FAM50AQ14320 339 aaKnown RBP14.87□□□□□ -0.03
SCAF8-202ENST00000367186 ZNF326Q5BKZ1 582 aaKnown RBP14.85□□□□□ -0.03
SCAF8-202ENST00000367186 TRIM52Q96A61 297 aa14.83□□□□□ -0.04
SCAF8-202ENST00000367186 ABCC9O60706 1549 aa14.75□□□□□ -0.05
SCAF8-202ENST00000367186 CDK11AQ9UQ88 783 aaPredicted RBP14.73□□□□□ -0.05
SCAF8-202ENST00000367186 ZCCHC6Q5VYS8 1495 aaKnown RBP14.72□□□□□ -0.05
SCAF8-202ENST00000367186 ANP32CO43423 234 aa14.68□□□□□ -0.06
SCAF8-202ENST00000367186 SLC24A1O60721 1099 aa14.68□□□□□ -0.06
SCAF8-202ENST00000367186 EIF5BO60841 1220 aaKnown RBP14.66□□□□□ -0.06
SCAF8-202ENST00000367186 NPM2Q86SE8 214 aaKnown RBP14.65□□□□□ -0.06
SCAF8-202ENST00000367186 ZBTB47Q9UFB7 747 aaPredicted RBP14.61□□□□□ -0.07
SCAF8-202ENST00000367186 ARID3CA6NKF2 412 aa14.59□□□□□ -0.07
SCAF8-202ENST00000367186 ACIN1Q9UKV3 1341 aaKnown RBP14.59□□□□□ -0.07
SCAF8-202ENST00000367186 CANXP27824 592 aaKnown RBP14.58□□□□□ -0.08
SCAF8-202ENST00000367186 P3H3Q8IVL6 736 aa14.51□□□□□ -0.09
SCAF8-202ENST00000367186 FKBP8Q14318 412 aa14.49□□□□□ -0.09
SCAF8-202ENST00000367186 SALL2Q9Y467 1007 aaPredicted RBP14.49□□□□□ -0.09
SCAF8-202ENST00000367186 ANP32AP39687 249 aaKnown RBP14.48□□□□□ -0.09
SCAF8-202ENST00000367186 FBLN2P98095 1184 aa14.48□□□□□ -0.09
SCAF8-202ENST00000367186 ARXQ96QS3 562 aa14.45□□□□□ -0.1
SCAF8-202ENST00000367186 PABPN1Q86U42 306 aaKnown RBP eCLIP14.44□□□□□ -0.1
SCAF8-202ENST00000367186 DCAF1Q9Y4B6 1507 aa14.4□□□□□ -0.1
SCAF8-202ENST00000367186 NBR1Q14596 966 aa14.4□□□□□ -0.1
SCAF8-202ENST00000367186 HNRNPUQ00839 825 aaKnown RBP eCLIP14.38□□□□□ -0.11
SCAF8-202ENST00000367186 FAM9BQ8IZU0 186 aa14.38□□□□□ -0.11
SCAF8-202ENST00000367186 DDX10Q13206 875 aaKnown RBP14.37□□□□□ -0.11
SCAF8-202ENST00000367186 ZNF777Q9ULD5 760 aaPredicted RBP14.36□□□□□ -0.11
SCAF8-202ENST00000367186 HSP90AA1P07900 732 aaKnown RBP14.36□□□□□ -0.11
SCAF8-202ENST00000367186 NEFMP07197 916 aa14.35□□□□□ -0.11
SCAF8-202ENST00000367186 IRX6P78412 446 aaPredicted RBP14.31□□□□□ -0.12
SCAF8-202ENST00000367186 SENP3-EIF4A1A0A087X0R7 540 aa14.27□□□□□ -0.13
SCAF8-202ENST00000367186 HIRIP3Q9BW71 556 aaPredicted RBP14.26□□□□□ -0.13
SCAF8-202ENST00000367186 NACADO15069 1562 aa14.26□□□□□ -0.13
SCAF8-202ENST00000367186 PLPPR3Q6T4P5 718 aa14.25□□□□□ -0.13
SCAF8-202ENST00000367186 ANP32BQ92688 251 aaKnown RBP14.25□□□□□ -0.13
SCAF8-202ENST00000367186 CHGAP10645 457 aaKnown RBP14.25□□□□□ -0.13
SCAF8-202ENST00000367186 MYO15BQ96JP2 1530 aa14.23□□□□□ -0.13
SCAF8-202ENST00000367186 CCDC136Q96JN2 1154 aa14.23□□□□□ -0.13
SCAF8-202ENST00000367186 SCRIBQ14160 1630 aa14.2□□□□□ -0.14
SCAF8-202ENST00000367186 CSRNP3Q8WYN3 585 aa14.2□□□□□ -0.14
SCAF8-202ENST00000367186 RB1CC1Q8TDY2 1594 aa14.19□□□□□ -0.14
SCAF8-202ENST00000367186 SCAF1Q9H7N4 1312 aaKnown RBP14.19□□□□□ -0.14
SCAF8-202ENST00000367186 UPF2Q9HAU5 1272 aaKnown RBP14.18□□□□□ -0.14
SCAF8-202ENST00000367186 SENP3Q9H4L4 574 aaPredicted RBP14.16□□□□□ -0.14
SCAF8-202ENST00000367186 CHIC2Q9UKJ5 165 aa14.15□□□□□ -0.14
SCAF8-202ENST00000367186 MIER1Q8N108 512 aa14.15□□□□□ -0.14
SCAF8-202ENST00000367186 TMC1Q8TDI8 760 aa14.15□□□□□ -0.14
SCAF8-202ENST00000367186 TONSLQ96HA7 1378 aa14.13□□□□□ -0.15
SCAF8-202ENST00000367186 MRS2Q9HD23 443 aa14.11□□□□□ -0.15
SCAF8-202ENST00000367186 KDM2AQ9Y2K7 1162 aa14.1□□□□□ -0.15
SCAF8-202ENST00000367186 PLEKHG5O94827 1062 aa14.09□□□□□ -0.15
SCAF8-202ENST00000367186 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.08□□□□□ -0.154e-7■■■□□ 18.1
SCAF8-202ENST00000367186 STAG3Q9UJ98 1225 aa14.07□□□□□ -0.16
SCAF8-202ENST00000367186 GLIPR1L2Q4G1C9 344 aa14.06□□□□□ -0.16
SCAF8-202ENST00000367186 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.06□□□□□ -0.16
SCAF8-202ENST00000367186 ESF1Q9H501 851 aaKnown RBP14.01□□□□□ -0.17
SCAF8-202ENST00000367186 RTN4Q9NQC3 1192 aaKnown RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms