RNA–Protein interactions for RNA: ENST00000593817.1

LRMDA-210, Transcript of leucine rich melanocyte differentiation associated, humanhuman

TSL 3

Gene LRMDA, Length 221 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRMDA-210ENST00000593817 NISCHQ9Y2I1 1504 aa13□□□□□ -0.33
LRMDA-210ENST00000593817 ABCC9O60706 1549 aa11.8□□□□□ -0.52
LRMDA-210ENST00000593817 CCDC180Q9P1Z9 1646 aa11.75□□□□□ -0.53
LRMDA-210ENST00000593817 DNAJC5BQ9UF47 199 aa11.18□□□□□ -0.62
LRMDA-210ENST00000593817 RB1CC1Q8TDY2 1594 aa11.16□□□□□ -0.62
LRMDA-210ENST00000593817 UNC13AQ9UPW8 1703 aa11.13□□□□□ -0.63
LRMDA-210ENST00000593817 NACADO15069 1562 aa11.06□□□□□ -0.64
LRMDA-210ENST00000593817 BICRAQ9NZM4 1560 aa10.94□□□□□ -0.66
LRMDA-210ENST00000593817 PABPN1Q86U42 306 aaKnown RBP eCLIP10.94□□□□□ -0.66
LRMDA-210ENST00000593817 DCAF8L2P0C7V8 631 aa10.93□□□□□ -0.66
LRMDA-210ENST00000593817 MYO15BQ96JP2 1530 aa10.85□□□□□ -0.67
LRMDA-210ENST00000593817 ZCCHC6Q5VYS8 1495 aaKnown RBP10.77□□□□□ -0.69
LRMDA-210ENST00000593817 SCRIBQ14160 1630 aa10.72□□□□□ -0.69
LRMDA-210ENST00000593817 DCAF1Q9Y4B6 1507 aa10.7□□□□□ -0.7
LRMDA-210ENST00000593817 CC2D2AQ9P2K1 1620 aa10.69□□□□□ -0.7
LRMDA-210ENST00000593817 SHROOM4Q9ULL8 1493 aa10.62□□□□□ -0.71
LRMDA-210ENST00000593817 EIF4G1Q04637 1599 aaKnown RBP10.62□□□□□ -0.71
LRMDA-210ENST00000593817 CECR2Q9BXF3 1484 aa10.61□□□□□ -0.71
LRMDA-210ENST00000593817 DNAJC5Q9H3Z4 198 aa10.22□□□□□ -0.77
LRMDA-210ENST00000593817 SMARCA4P51532 1647 aa10.21□□□□□ -0.78
LRMDA-210ENST00000593817 NCAPD3P42695 1498 aa10.19□□□□□ -0.78
LRMDA-210ENST00000593817 ATAD2BQ9ULI0 1458 aa10.18□□□□□ -0.78
LRMDA-210ENST00000593817 NESP48681 1621 aa10.15□□□□□ -0.78
LRMDA-210ENST00000593817 HMGXB3Q12766 1538 aa10.14□□□□□ -0.79
LRMDA-210ENST00000593817 CUX2O14529 1486 aa10.14□□□□□ -0.79
LRMDA-210ENST00000593817 SMARCA2P51531 1590 aa10.13□□□□□ -0.79
LRMDA-210ENST00000593817 ERCC6Q03468 1493 aa10.12□□□□□ -0.79
LRMDA-210ENST00000593817 THOC2Q8NI27 1593 aaKnown RBP10.09□□□□□ -0.79
LRMDA-210ENST00000593817 KIF21AQ7Z4S6 1674 aa10.09□□□□□ -0.79
LRMDA-210ENST00000593817 PEG3Q9GZU2 1588 aa10.08□□□□□ -0.8
LRMDA-210ENST00000593817 BAZ1AQ9NRL2 1556 aaPredicted RBP10.07□□□□□ -0.8
LRMDA-210ENST00000593817 MROH2BQ7Z745 1585 aa10.06□□□□□ -0.8
LRMDA-210ENST00000593817 BAZ1BQ9UIG0 1483 aaKnown RBP10.05□□□□□ -0.8
LRMDA-210ENST00000593817 LAMC3Q9Y6N6 1575 aa10.01□□□□□ -0.81
LRMDA-210ENST00000593817 WIZO95785 1651 aa9.99□□□□□ -0.81
LRMDA-210ENST00000593817 PDS5BQ9NTI5 1447 aa9.88□□□□□ -0.83
LRMDA-210ENST00000593817 WDR62O43379 1518 aa9.87□□□□□ -0.83
LRMDA-210ENST00000593817 CADPSQ9ULU8 1353 aa9.87□□□□□ -0.83
LRMDA-210ENST00000593817 MRC2Q9UBG0 1479 aa9.85□□□□□ -0.83
LRMDA-210ENST00000593817 PRDM2Q13029 1718 aa9.82□□□□□ -0.84
LRMDA-210ENST00000593817 FANCD2Q9BXW9 1451 aa9.79□□□□□ -0.84
LRMDA-210ENST00000593817 CEP164Q9UPV0 1460 aa9.79□□□□□ -0.84
LRMDA-210ENST00000593817 TOP2AP11388 1531 aaKnown RBP9.77□□□□□ -0.84
LRMDA-210ENST00000593817 RSF1Q96T23 1441 aaPredicted RBP9.77□□□□□ -0.85
LRMDA-210ENST00000593817 URB2Q14146 1524 aaKnown RBP9.77□□□□□ -0.85
LRMDA-210ENST00000593817 CFTRP13569 1480 aa9.76□□□□□ -0.85
LRMDA-210ENST00000593817 TRIM41Q8WV44 630 aa9.74□□□□□ -0.85
LRMDA-210ENST00000593817 ZNF608Q9ULD9 1512 aaPredicted RBP9.66□□□□□ -0.86
LRMDA-210ENST00000593817 CCDC88BA6NC98 1476 aa9.66□□□□□ -0.86
LRMDA-210ENST00000593817 RIMBP3CA6NJZ7 1639 aa9.66□□□□□ -0.86
LRMDA-210ENST00000593817 RIMBP3BA6NNM3 1639 aa9.66□□□□□ -0.86
LRMDA-210ENST00000593817 RIMBP3Q9UFD9 1639 aa9.66□□□□□ -0.86
LRMDA-210ENST00000593817 CHD1O14646 1710 aa9.63□□□□□ -0.87
LRMDA-210ENST00000593817 TOPBP1Q92547 1522 aa9.62□□□□□ -0.87
LRMDA-210ENST00000593817 EIF4G3O43432 1585 aaKnown RBP9.62□□□□□ -0.87
LRMDA-210ENST00000593817 OSCARQ8IYS5 282 aa9.61□□□□□ -0.87
LRMDA-210ENST00000593817 TARBP1Q13395 1621 aaKnown RBP9.6□□□□□ -0.87
LRMDA-210ENST00000593817 IFT140Q96RY7 1462 aa9.59□□□□□ -0.87
LRMDA-210ENST00000593817 DNMBPQ6XZF7 1577 aa9.58□□□□□ -0.88
LRMDA-210ENST00000593817 ARHGEF11O15085 1522 aa9.56□□□□□ -0.88
LRMDA-210ENST00000593817 AQRO60306 1485 aaKnown RBP eCLIP9.53□□□□□ -0.88
LRMDA-210ENST00000593817 POLA1P09884 1462 aaPredicted RBP9.51□□□□□ -0.89
LRMDA-210ENST00000593817 RAD54L2Q9Y4B4 1467 aa9.5□□□□□ -0.89
LRMDA-210ENST00000593817 ABCC8Q09428 1581 aa9.5□□□□□ -0.89
LRMDA-210ENST00000593817 WDR97A6NE52 1622 aa9.49□□□□□ -0.89
LRMDA-210ENST00000593817 ARAP1Q96P48 1450 aa9.47□□□□□ -0.89
LRMDA-210ENST00000593817 CUX1P39880 1505 aa9.46□□□□□ -0.9
LRMDA-210ENST00000593817 PBRM1Q86U86 1689 aa9.45□□□□□ -0.9
LRMDA-210ENST00000593817 FGD5Q6ZNL6 1462 aa9.44□□□□□ -0.9
LRMDA-210ENST00000593817 CLASP1Q7Z460 1538 aa9.44□□□□□ -0.9
LRMDA-210ENST00000593817 TDRD9Q8NDG6 1382 aaKnown RBP9.43□□□□□ -0.9
LRMDA-210ENST00000593817 CYB5RLQ6IPT4 315 aa9.43□□□□□ -0.9
LRMDA-210ENST00000593817 SNAPC4Q5SXM2 1469 aa9.42□□□□□ -0.9
LRMDA-210ENST00000593817 SOGA1O94964 1423 aa9.41□□□□□ -0.9
LRMDA-210ENST00000593817 FBLN2P98095 1184 aa9.4□□□□□ -0.9
LRMDA-210ENST00000593817 ABCA5Q8WWZ7 1642 aa9.38□□□□□ -0.91
LRMDA-210ENST00000593817 SYNJ1O43426 1573 aa9.37□□□□□ -0.91
LRMDA-210ENST00000593817 MAGI1Q96QZ7 1491 aaPredicted RBP9.36□□□□□ -0.91
LRMDA-210ENST00000593817 GRIN2BQ13224 1484 aa9.34□□□□□ -0.91
LRMDA-210ENST00000593817 ERCC6L2Q5T890 1561 aa9.34□□□□□ -0.91
LRMDA-210ENST00000593817 SYNJ2O15056 1496 aa9.34□□□□□ -0.91
LRMDA-210ENST00000593817 GAPVD1Q14C86 1478 aa9.32□□□□□ -0.92
LRMDA-210ENST00000593817 ABCA10Q8WWZ4 1543 aa9.31□□□□□ -0.92
LRMDA-210ENST00000593817 TRHP20396 242 aaPredicted RBP9.31□□□□□ -0.92
LRMDA-210ENST00000593817 BIVM-ERCC5R4GMW8 1640 aa9.31□□□□□ -0.92
LRMDA-210ENST00000593817 CHMP7Q8WUX9 453 aaPredicted RBP9.3□□□□□ -0.92
LRMDA-210ENST00000593817 ADAMTS12P58397 1594 aa9.29□□□□□ -0.92
LRMDA-210ENST00000593817 CEP170Q5SW79 1584 aa9.29□□□□□ -0.92
LRMDA-210ENST00000593817 KIF13AQ9H1H9 1805 aa9.27□□□□□ -0.93
LRMDA-210ENST00000593817 TOP2BQ02880 1626 aa9.27□□□□□ -0.93
LRMDA-210ENST00000593817 SHROOM2Q13796 1616 aa9.27□□□□□ -0.93
LRMDA-210ENST00000593817 GRIN2AQ12879 1464 aa9.26□□□□□ -0.93
LRMDA-210ENST00000593817 SUPT5HO00267 1087 aaKnown RBP9.23□□□□□ -0.93
LRMDA-210ENST00000593817 NUP160Q12769 1436 aa9.22□□□□□ -0.93
LRMDA-210ENST00000593817 WRNQ14191 1432 aaPredicted RBP eCLIP9.2□□□□□ -0.94
LRMDA-210ENST00000593817 ERICH3Q5RHP9 1530 aa9.18□□□□□ -0.94
LRMDA-210ENST00000593817 RUSC2Q8N2Y8 1516 aa9.17□□□□□ -0.94
LRMDA-210ENST00000593817 FHAD1B1AJZ9 1412 aa9.17□□□□□ -0.94
LRMDA-210ENST00000593817 PRG4Q92954 1404 aaPredicted RBP9.13□□□□□ -0.95
LRMDA-210ENST00000593817 TSPOAP1O95153 1857 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 269.5 ms