RNA–Protein interactions for RNA: ENST00000464357.1

LSS-206, Transcript of lanosterol synthase, humanhuman

TSL 5

Gene LSS, Length 1,041 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-206ENST00000464357 NISCHQ9Y2I1 1504 aa50.67■■■■■ 5.7
LSS-206ENST00000464357 CCDC180Q9P1Z9 1646 aa44.96■■■■■ 4.79
LSS-206ENST00000464357 ABCC9O60706 1549 aa44.12■■■■■ 4.65
LSS-206ENST00000464357 DCAF8L2P0C7V8 631 aa42.46■■■■■ 4.39
LSS-206ENST00000464357 RB1CC1Q8TDY2 1594 aa42.36■■■■■ 4.37
LSS-206ENST00000464357 NACADO15069 1562 aa42.31■■■■■ 4.36
LSS-206ENST00000464357 ZCCHC6Q5VYS8 1495 aaKnown RBP42.19■■■■■ 4.34
LSS-206ENST00000464357 MYO15BQ96JP2 1530 aa42.04■■■■■ 4.32
LSS-206ENST00000464357 DCAF1Q9Y4B6 1507 aa41.88■■■■■ 4.29
LSS-206ENST00000464357 UNC13AQ9UPW8 1703 aa41.38■■■■■ 4.21
LSS-206ENST00000464357 PABPN1Q86U42 306 aaKnown RBP eCLIP41.29■■■■■ 4.2
LSS-206ENST00000464357 BICRAQ9NZM4 1560 aa41.11■■■■■ 4.17
LSS-206ENST00000464357 SCRIBQ14160 1630 aa41.1■■■■■ 4.17
LSS-206ENST00000464357 SHROOM4Q9ULL8 1493 aa40.6■■■■■ 4.09
LSS-206ENST00000464357 DNAJC5BQ9UF47 199 aa40.56■■■■■ 4.08
LSS-206ENST00000464357 EIF4G1Q04637 1599 aaKnown RBP40.01■■■■■ 4
LSS-206ENST00000464357 CC2D2AQ9P2K1 1620 aa39.87■■■■□ 3.97
LSS-206ENST00000464357 CECR2Q9BXF3 1484 aa39.62■■■■□ 3.93
LSS-206ENST00000464357 SMARCA4P51532 1647 aa39.29■■■■□ 3.88
LSS-206ENST00000464357 BAZ1AQ9NRL2 1556 aaPredicted RBP39.25■■■■□ 3.87
LSS-206ENST00000464357 ATAD2BQ9ULI0 1458 aa39.11■■■■□ 3.85
LSS-206ENST00000464357 NCAPD3P42695 1498 aa39.09■■■■□ 3.85
LSS-206ENST00000464357 MROH2BQ7Z745 1585 aa39.07■■■■□ 3.84
LSS-206ENST00000464357 SMARCA2P51531 1590 aa39.02■■■■□ 3.84
LSS-206ENST00000464357 PEG3Q9GZU2 1588 aa38.89■■■■□ 3.82
LSS-206ENST00000464357 HMGXB3Q12766 1538 aa38.84■■■■□ 3.81
LSS-206ENST00000464357 BAZ1BQ9UIG0 1483 aaKnown RBP38.78■■■■□ 3.8
LSS-206ENST00000464357 RSF1Q96T23 1441 aaPredicted RBP38.64■■■■□ 3.78
LSS-206ENST00000464357 WIZO95785 1651 aa38.64■■■■□ 3.78
LSS-206ENST00000464357 TOP2AP11388 1531 aaKnown RBP38.2■■■■□ 3.71
LSS-206ENST00000464357 NESP48681 1621 aa38.18■■■■□ 3.7
LSS-206ENST00000464357 LAMC3Q9Y6N6 1575 aa38.01■■■■□ 3.67
LSS-206ENST00000464357 ERCC6Q03468 1493 aa38■■■■□ 3.67
LSS-206ENST00000464357 CADPSQ9ULU8 1353 aa37.96■■■■□ 3.67
LSS-206ENST00000464357 CCDC88BA6NC98 1476 aa37.81■■■■□ 3.64
LSS-206ENST00000464357 PDS5BQ9NTI5 1447 aa37.79■■■■□ 3.64
LSS-206ENST00000464357 SUPT5HO00267 1087 aaKnown RBP37.74■■■■□ 3.63
LSS-206ENST00000464357 CFTRP13569 1480 aa37.72■■■■□ 3.63
LSS-206ENST00000464357 KIF21AQ7Z4S6 1674 aa37.66■■■■□ 3.62
LSS-206ENST00000464357 CUX2O14529 1486 aa37.55■■■■□ 3.6
LSS-206ENST00000464357 THOC2Q8NI27 1593 aaKnown RBP37.53■■■■□ 3.6
LSS-206ENST00000464357 FANCD2Q9BXW9 1451 aa37.52■■■■□ 3.6
LSS-206ENST00000464357 CEP164Q9UPV0 1460 aa37.45■■■■□ 3.59
LSS-206ENST00000464357 MRC2Q9UBG0 1479 aa37.4■■■■□ 3.58
LSS-206ENST00000464357 PRDM2Q13029 1718 aa37.33■■■■□ 3.57
LSS-206ENST00000464357 WDR62O43379 1518 aa37.26■■■■□ 3.55
LSS-206ENST00000464357 URB2Q14146 1524 aaKnown RBP37.15■■■■□ 3.54
LSS-206ENST00000464357 TOPBP1Q92547 1522 aa36.91■■■■□ 3.5
LSS-206ENST00000464357 ABCC8Q09428 1581 aa36.88■■■■□ 3.49
LSS-206ENST00000464357 DNMBPQ6XZF7 1577 aa36.84■■■■□ 3.49
LSS-206ENST00000464357 IFT140Q96RY7 1462 aa36.67■■■■□ 3.46
LSS-206ENST00000464357 CUX1P39880 1505 aa36.64■■■■□ 3.46
LSS-206ENST00000464357 POLA1P09884 1462 aaPredicted RBP36.6■■■■□ 3.45
LSS-206ENST00000464357 ZNF608Q9ULD9 1512 aaPredicted RBP36.54■■■■□ 3.44
LSS-206ENST00000464357 FGD5Q6ZNL6 1462 aa36.52■■■■□ 3.44
LSS-206ENST00000464357 TARBP1Q13395 1621 aaKnown RBP36.49■■■■□ 3.43
LSS-206ENST00000464357 RAD54L2Q9Y4B4 1467 aa36.49■■■■□ 3.43
LSS-206ENST00000464357 DNAJC5Q9H3Z4 198 aa36.48■■■■□ 3.43
LSS-206ENST00000464357 SOGA1O94964 1423 aa36.48■■■■□ 3.43
LSS-206ENST00000464357 WRNQ14191 1432 aaPredicted RBP eCLIP36.42■■■■□ 3.42
LSS-206ENST00000464357 AQRO60306 1485 aaKnown RBP eCLIP36.36■■■■□ 3.411e-6■■■■□ 19.4
LSS-206ENST00000464357 EIF4G3O43432 1585 aaKnown RBP36.34■■■■□ 3.41
LSS-206ENST00000464357 SYNJ1O43426 1573 aa36.32■■■■□ 3.4
LSS-206ENST00000464357 TDRD9Q8NDG6 1382 aaKnown RBP36.3■■■■□ 3.4
LSS-206ENST00000464357 TOP2BQ02880 1626 aa36.3■■■■□ 3.4
LSS-206ENST00000464357 BIVM-ERCC5R4GMW8 1640 aa36.27■■■■□ 3.4
LSS-206ENST00000464357 WDR97A6NE52 1622 aa36.15■■■■□ 3.38
LSS-206ENST00000464357 ABCA10Q8WWZ4 1543 aa36.14■■■■□ 3.38
LSS-206ENST00000464357 OSCARQ8IYS5 282 aa36.09■■■■□ 3.37
LSS-206ENST00000464357 GAPVD1Q14C86 1478 aa36.04■■■■□ 3.36
LSS-206ENST00000464357 GRIN2BQ13224 1484 aa36.02■■■■□ 3.36
LSS-206ENST00000464357 SNAPC4Q5SXM2 1469 aa35.98■■■■□ 3.35
LSS-206ENST00000464357 ABCA5Q8WWZ7 1642 aa35.97■■■■□ 3.35
LSS-206ENST00000464357 FBLN2P98095 1184 aa35.96■■■■□ 3.35
LSS-206ENST00000464357 MAGI1Q96QZ7 1491 aaPredicted RBP35.91■■■■□ 3.34
LSS-206ENST00000464357 PBRM1Q86U86 1689 aa35.9■■■■□ 3.34
LSS-206ENST00000464357 CHD1O14646 1710 aa35.87■■■■□ 3.33
LSS-206ENST00000464357 CHMP7Q8WUX9 453 aaPredicted RBP35.84■■■■□ 3.33
LSS-206ENST00000464357 SYNJ2O15056 1496 aa35.79■■■■□ 3.32
LSS-206ENST00000464357 ERICH3Q5RHP9 1530 aa35.7■■■■□ 3.31
LSS-206ENST00000464357 KIF27Q86VH2 1401 aa35.66■■■■□ 3.3
LSS-206ENST00000464357 ADAMTS12P58397 1594 aa35.64■■■■□ 3.3
LSS-206ENST00000464357 TRIM41Q8WV44 630 aa35.63■■■■□ 3.29
LSS-206ENST00000464357 FHAD1B1AJZ9 1412 aa35.62■■■■□ 3.29
LSS-206ENST00000464357 GRIN2AQ12879 1464 aa35.56■■■■□ 3.28
LSS-206ENST00000464357 IGF1RP08069 1367 aa35.55■■■■□ 3.28
LSS-206ENST00000464357 CLASP1Q7Z460 1538 aa35.5■■■■□ 3.27
LSS-206ENST00000464357 ARHGEF11O15085 1522 aa35.45■■■■□ 3.27
LSS-206ENST00000464357 RIMBP3CA6NJZ7 1639 aa35.44■■■■□ 3.26
LSS-206ENST00000464357 RIMBP3BA6NNM3 1639 aa35.44■■■■□ 3.26
LSS-206ENST00000464357 RIMBP3Q9UFD9 1639 aa35.44■■■■□ 3.26
LSS-206ENST00000464357 NUP160Q12769 1436 aa35.4■■■■□ 3.26
LSS-206ENST00000464357 RUSC2Q8N2Y8 1516 aa35.39■■■■□ 3.26
LSS-206ENST00000464357 CEP170Q5SW79 1584 aa35.38■■■■□ 3.25
LSS-206ENST00000464357 CUL7Q14999 1698 aa35.35■■■■□ 3.25
LSS-206ENST00000464357 CARMIL1Q5VZK9 1371 aa35.32■■■■□ 3.24
LSS-206ENST00000464357 CHIC1Q5VXU3 224 aa35.21■■■■□ 3.23
LSS-206ENST00000464357 CYB5RLQ6IPT4 315 aa35.2■■■■□ 3.23
LSS-206ENST00000464357 ARAP1Q96P48 1450 aa35.17■■■■□ 3.22
LSS-206ENST00000464357 JPH4Q96JJ6 628 aa35.1■■■■□ 3.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms