Protein–RNA interactions for Protein: Q9NRR4

DROSHA, Ribonuclease 3, humanhuman

Known RBP eCLIP

Length 1,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DROSHAQ9NRR4 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.96■□□□□ 0.951e-6■■□□□ 13.5
DROSHAQ9NRR4 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.723e-6■■□□□ 13.5
DROSHAQ9NRR4 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.711e-6■■□□□ 13.5
DROSHAQ9NRR4 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC9.92□□□□□ -0.821e-6■■□□□ 13.5
DROSHAQ9NRR4 QKI-217ENST00000545607 846 ntTSL 58.37□□□□□ -1.071e-6■■□□□ 13.5
DROSHAQ9NRR4 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.123e-6■■□□□ 13.5
DROSHAQ9NRR4 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC6.03□□□□□ -1.441e-6■■□□□ 13.5
DROSHAQ9NRR4 MATR3-221ENST00000513121 573 ntTSL 229.47■■■□□ 2.315e-19■■□□□ 13.5
DROSHAQ9NRR4 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC28.98■■■□□ 2.235e-19■■□□□ 13.5
DROSHAQ9NRR4 MATR3-220ENST00000512876 575 ntTSL 326.18■■□□□ 1.785e-19■■□□□ 13.5
DROSHAQ9NRR4 MATR3-222ENST00000513678 444 ntTSL 226.18■■□□□ 1.785e-19■■□□□ 13.5
DROSHAQ9NRR4 MATR3-208ENST00000504045 1530 ntTSL 525.92■■□□□ 1.745e-19■■□□□ 13.5
DROSHAQ9NRR4 MATR3-213ENST00000508689 561 ntTSL 425.04■■□□□ 1.65e-19■■□□□ 13.5
DROSHAQ9NRR4 MATR3-235ENST00000506147 580 ntTSL 424.25■■□□□ 1.475e-19■■□□□ 13.5
DROSHAQ9NRR4 MATR3-239ENST00000514694 587 ntTSL 423.65■■□□□ 1.385e-19■■□□□ 13.5
DROSHAQ9NRR4 MATR3-238ENST00000512107 579 ntTSL 422.31■■□□□ 1.165e-19■■□□□ 13.5
DROSHAQ9NRR4 MATR3-236ENST00000509644 750 ntTSL 320.72■□□□□ 0.915e-19■■□□□ 13.5
DROSHAQ9NRR4 MATR3-233ENST00000504203 2243 ntTSL 2 BASIC19.19■□□□□ 0.665e-19■■□□□ 13.5
DROSHAQ9NRR4 MATR3-234ENST00000505016 664 ntTSL 219.19■□□□□ 0.665e-19■■□□□ 13.5
DROSHAQ9NRR4 MATR3-231ENST00000502394 589 ntTSL 418.61■□□□□ 0.575e-19■■□□□ 13.5
DROSHAQ9NRR4 MATR3-237ENST00000509990 3249 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.355e-19■■□□□ 13.5
DROSHAQ9NRR4 MATR3-227ENST00000618441 4018 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.045e-19■■□□□ 13.5
DROSHAQ9NRR4 MATR3-201ENST00000394805 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.515e-19■■□□□ 13.5
DROSHAQ9NRR4 MATR3-229ENST00000361059 3970 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.535e-19■■□□□ 13.5
DROSHAQ9NRR4 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC11.63□□□□□ -0.555e-19■■□□□ 13.5
DROSHAQ9NRR4 MATR3-232ENST00000502929 4373 ntTSL 2 BASIC11.48□□□□□ -0.575e-19■■□□□ 13.5
DROSHAQ9NRR4 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC9.49□□□□□ -0.895e-19■■□□□ 13.5
DROSHAQ9NRR4 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC8.12□□□□□ -1.115e-19■■□□□ 13.5
DROSHAQ9NRR4 MATR3-218ENST00000511978 573 ntTSL 37.64□□□□□ -1.195e-19■■□□□ 13.5
DROSHAQ9NRR4 MATR3-214ENST00000509918 377 ntTSL 46.39□□□□□ -1.395e-19■■□□□ 13.5
DROSHAQ9NRR4 MATR3-216ENST00000511249 447 ntTSL 44.45□□□□□ -1.75e-19■■□□□ 13.5
DROSHAQ9NRR4 MATR3-212ENST00000507860 571 ntTSL 44.39□□□□□ -1.715e-19■■□□□ 13.5
DROSHAQ9NRR4 MATR3-209ENST00000504311 423 ntTSL 32.93□□□□□ -1.945e-19■■□□□ 13.5
DROSHAQ9NRR4 MAPK8-208ENST00000426557 860 ntTSL 422.95■■□□□ 1.262e-6■■□□□ 13.5
DROSHAQ9NRR4 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC30.18■■■□□ 2.422e-6■■□□□ 13.5
DROSHAQ9NRR4 KMT5C-211ENST00000592631 869 ntTSL 327.56■■■□□ 21e-8■■□□□ 13.5
DROSHAQ9NRR4 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC25.34■■□□□ 1.651e-8■■□□□ 13.5
DROSHAQ9NRR4 KMT5C-204ENST00000460956 637 ntTSL 524.46■■□□□ 1.511e-8■■□□□ 13.5
DROSHAQ9NRR4 KMT5C-209ENST00000587442 464 ntTSL 318.17■□□□□ 0.51e-8■■□□□ 13.5
DROSHAQ9NRR4 IDUA-212ENST00000514698 2185 ntTSL 528.63■■■□□ 2.173e-6■■□□□ 13.5
DROSHAQ9NRR4 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.953e-6■■□□□ 13.5
DROSHAQ9NRR4 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC26.77■■□□□ 1.883e-6■■□□□ 13.5
DROSHAQ9NRR4 TAGLN2-204ENST00000397334 801 ntTSL 528.62■■■□□ 2.171e-6■■□□□ 13.5
DROSHAQ9NRR4 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC21.48■■□□□ 1.031e-6■■□□□ 13.5
DROSHAQ9NRR4 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.031e-6■■□□□ 13.5
DROSHAQ9NRR4 TAGLN2-201ENST00000320307 709 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.691e-6■■□□□ 13.5
DROSHAQ9NRR4 TAGLN2-205ENST00000478033 1051 ntTSL 218.53■□□□□ 0.561e-6■■□□□ 13.5
DROSHAQ9NRR4 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC29.83■■■□□ 2.371e-8■■□□□ 13.4
DROSHAQ9NRR4 TRIB3-204ENST00000615226 877 ntTSL 38.76□□□□□ -1.011e-8■■□□□ 13.4
DROSHAQ9NRR4 CERS2-207ENST00000457392 545 ntTSL 335.51■■■■□ 3.286e-7■■□□□ 13.4
DROSHAQ9NRR4 ZNF362-203ENST00000483388 712 ntTSL 235.49■■■■□ 3.271e-6■■□□□ 13.4
DROSHAQ9NRR4 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 11e-6■■□□□ 13.4
DROSHAQ9NRR4 EPB41L1-216ENST00000454226 593 ntTSL 320.88■□□□□ 0.936e-7■■□□□ 13.4
DROSHAQ9NRR4 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.931e-6■■□□□ 13.4
DROSHAQ9NRR4 EPB41L1-217ENST00000479336 846 ntTSL 320.51■□□□□ 0.876e-7■■□□□ 13.4
DROSHAQ9NRR4 EPB41L1-214ENST00000451082 803 ntTSL 519.9■□□□□ 0.786e-7■■□□□ 13.4
DROSHAQ9NRR4 EPB41L1-203ENST00000373941 2652 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.286e-7■■□□□ 13.4
DROSHAQ9NRR4 EPB41L1-206ENST00000373950 3631 ntTSL 5 BASIC16.63■□□□□ 0.256e-7■■□□□ 13.4
DROSHAQ9NRR4 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.076e-7■■□□□ 13.4
DROSHAQ9NRR4 EPB41L1-218ENST00000628415 3287 ntTSL 2 BASIC15.05■□□□□ 06e-7■■□□□ 13.4
DROSHAQ9NRR4 EPB41L1-212ENST00000441639 5967 ntTSL 5 BASIC14.91□□□□□ -0.026e-7■■□□□ 13.4
DROSHAQ9NRR4 ZNF362-204ENST00000490959 197 ntTSL 514.23□□□□□ -0.131e-6■■□□□ 13.4
DROSHAQ9NRR4 EPB41L1-205ENST00000373946 6327 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.296e-7■■□□□ 13.4
DROSHAQ9NRR4 EPB41L1-201ENST00000202028 3514 ntTSL 1 (best) BASIC12.22□□□□□ -0.456e-7■■□□□ 13.4
DROSHAQ9NRR4 EPB41L1-219ENST00000636016 6665 ntTSL 211.06□□□□□ -0.646e-7■■□□□ 13.4
DROSHAQ9NRR4 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC24.33■■□□□ 1.499e-7■■□□□ 13.4
DROSHAQ9NRR4 CUX1-210ENST00000497815 947 ntTSL 218.11■□□□□ 0.492e-6■■□□□ 13.4
DROSHAQ9NRR4 CUX1-202ENST00000292538 2930 ntTSL 1 (best) BASIC16.51■□□□□ 0.232e-6■■□□□ 13.4
DROSHAQ9NRR4 CUX1-212ENST00000547394 2878 ntTSL 2 BASIC16.05■□□□□ 0.162e-6■■□□□ 13.4
DROSHAQ9NRR4 CUX1-204ENST00000393824 2331 ntTSL 2 BASIC15.92■□□□□ 0.142e-6■■□□□ 13.4
DROSHAQ9NRR4 CUX1-221ENST00000622516 2990 ntTSL 1 (best) BASIC15.4■□□□□ 0.062e-6■■□□□ 13.4
DROSHAQ9NRR4 CUX1-205ENST00000425244 2776 ntTSL 2 BASIC15.28■□□□□ 0.042e-6■■□□□ 13.4
DROSHAQ9NRR4 CUX1-206ENST00000437600 3031 ntTSL 1 (best) BASIC13.59□□□□□ -0.232e-6■■□□□ 13.4
DROSHAQ9NRR4 CUX1-203ENST00000360264 13762 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.642e-6■■□□□ 13.4
DROSHAQ9NRR4 CUX1-220ENST00000607092 559 ntTSL 39.96□□□□□ -0.822e-6■■□□□ 13.4
DROSHAQ9NRR4 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.983e-10■■□□□ 13.4
DROSHAQ9NRR4 HINT1-209ENST00000513345 656 ntTSL 224.11■■□□□ 1.453e-10■■□□□ 13.4
DROSHAQ9NRR4 HINT1-206ENST00000508495 825 ntTSL 1 (best)23.91■■□□□ 1.423e-10■■□□□ 13.4
DROSHAQ9NRR4 HINT1-205ENST00000508488 703 ntTSL 2 BASIC21.13■□□□□ 0.973e-10■■□□□ 13.4
DROSHAQ9NRR4 HINT1-204ENST00000506908 681 ntTSL 2 BASIC20.23■□□□□ 0.833e-10■■□□□ 13.4
DROSHAQ9NRR4 HINT1-208ENST00000513012 583 ntTSL 4 BASIC18.17■□□□□ 0.53e-10■■□□□ 13.4
DROSHAQ9NRR4 HINT1-207ENST00000511475 923 ntTSL 316.4■□□□□ 0.223e-10■■□□□ 13.4
DROSHAQ9NRR4 HINT1-203ENST00000506207 369 ntTSL 59.37□□□□□ -0.913e-10■■□□□ 13.4
DROSHAQ9NRR4 HINT1-202ENST00000504202 619 ntTSL 55.36□□□□□ -1.553e-10■■□□□ 13.4
DROSHAQ9NRR4 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC23.34■■□□□ 1.331e-6■■□□□ 13.4
DROSHAQ9NRR4 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.051e-6■■□□□ 13.4
DROSHAQ9NRR4 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.841e-6■■□□□ 13.4
DROSHAQ9NRR4 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC29.89■■■□□ 2.381e-7■■□□□ 13.4
DROSHAQ9NRR4 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.131e-7■■□□□ 13.4
DROSHAQ9NRR4 PTOV1-205ENST00000595934 1880 nt35.12■■■■□ 3.214e-8■■□□□ 13.4
DROSHAQ9NRR4 PTOV1-213ENST00000600105 635 ntTSL 330.44■■■□□ 2.464e-8■■□□□ 13.4
DROSHAQ9NRR4 PTOV1-203ENST00000594165 986 ntTSL 329.25■■■□□ 2.274e-8■■□□□ 13.4
DROSHAQ9NRR4 PTOV1-202ENST00000594151 995 ntTSL 522.12■■□□□ 1.134e-8■■□□□ 13.4
DROSHAQ9NRR4 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC40.37■■■■■ 4.052e-6■■□□□ 13.4
DROSHAQ9NRR4 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC35.29■■■■□ 3.242e-6■■□□□ 13.4
DROSHAQ9NRR4 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.012e-6■■□□□ 13.4
DROSHAQ9NRR4 ARF1-209ENST00000478424 1059 ntTSL 238.77■■■■□ 3.82e-7■■□□□ 13.4
DROSHAQ9NRR4 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC34.29■■■■□ 3.082e-7■■□□□ 13.4
DROSHAQ9NRR4 ARF1-204ENST00000470670 712 ntTSL 322.18■■□□□ 1.142e-7■■□□□ 13.4
DROSHAQ9NRR4 ARF1-201ENST00000272102 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.222e-7■■□□□ 13.4
Retrieved 100 of 16,331 protein–RNA pairs in 113.2 ms