RNA–Protein interactions for RNA: ENST00000540651.5

ARF1-213, Transcript of ADP ribosylation factor 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ARF1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF1-213ENST00000540651 NISCHQ9Y2I1 1504 aa52.45■■■■■ 5.99
ARF1-213ENST00000540651 CCDC180Q9P1Z9 1646 aa45.9■■■■■ 4.94
ARF1-213ENST00000540651 ABCC9O60706 1549 aa43.97■■■■■ 4.63
ARF1-213ENST00000540651 ZCCHC6Q5VYS8 1495 aaKnown RBP43.96■■■■■ 4.63
ARF1-213ENST00000540651 DCAF8L2P0C7V8 631 aa43.47■■■■■ 4.55
ARF1-213ENST00000540651 DCAF1Q9Y4B6 1507 aa43.33■■■■■ 4.53
ARF1-213ENST00000540651 MYO15BQ96JP2 1530 aa43.01■■■■■ 4.48
ARF1-213ENST00000540651 NACADO15069 1562 aa42.89■■■■■ 4.46
ARF1-213ENST00000540651 RB1CC1Q8TDY2 1594 aa42.64■■■■■ 4.42
ARF1-213ENST00000540651 SHROOM4Q9ULL8 1493 aa42.45■■■■■ 4.39
ARF1-213ENST00000540651 SCRIBQ14160 1630 aa42.2■■■■■ 4.35
ARF1-213ENST00000540651 UNC13AQ9UPW8 1703 aa41.81■■■■■ 4.28
ARF1-213ENST00000540651 BICRAQ9NZM4 1560 aa41.47■■■■■ 4.23
ARF1-213ENST00000540651 PABPN1Q86U42 306 aaKnown RBP eCLIP41.39■■■■■ 4.22
ARF1-213ENST00000540651 CECR2Q9BXF3 1484 aa40.87■■■■■ 4.13
ARF1-213ENST00000540651 SUPT5HO00267 1087 aaKnown RBP40.55■■■■■ 4.08
ARF1-213ENST00000540651 MROH2BQ7Z745 1585 aa40.54■■■■■ 4.08
ARF1-213ENST00000540651 RSF1Q96T23 1441 aaPredicted RBP40.52■■■■■ 4.08
ARF1-213ENST00000540651 BAZ1AQ9NRL2 1556 aaPredicted RBP40.5■■■■■ 4.07
ARF1-213ENST00000540651 SMARCA4P51532 1647 aa40.41■■■■■ 4.06
ARF1-213ENST00000540651 EIF4G1Q04637 1599 aaKnown RBP40.22■■■■■ 4.03
ARF1-213ENST00000540651 WIZO95785 1651 aa40.16■■■■■ 4.02
ARF1-213ENST00000540651 PEG3Q9GZU2 1588 aa39.94■■■■□ 3.98
ARF1-213ENST00000540651 ATAD2BQ9ULI0 1458 aa39.91■■■■□ 3.98
ARF1-213ENST00000540651 SMARCA2P51531 1590 aa39.8■■■■□ 3.96
ARF1-213ENST00000540651 CC2D2AQ9P2K1 1620 aa39.76■■■■□ 3.95
ARF1-213ENST00000540651 TOP2AP11388 1531 aaKnown RBP39.69■■■■□ 3.94
ARF1-213ENST00000540651 NCAPD3P42695 1498 aa39.64■■■■□ 3.94
ARF1-213ENST00000540651 BAZ1BQ9UIG0 1483 aaKnown RBP39.6■■■■□ 3.93
ARF1-213ENST00000540651 HMGXB3Q12766 1538 aa39.5■■■■□ 3.91
ARF1-213ENST00000540651 DNAJC5BQ9UF47 199 aa39.37■■■■□ 3.89
ARF1-213ENST00000540651 CCDC88BA6NC98 1476 aa39.32■■■■□ 3.89
ARF1-213ENST00000540651 CFTRP13569 1480 aa38.62■■■■□ 3.77
ARF1-213ENST00000540651 CADPSQ9ULU8 1353 aa38.59■■■■□ 3.77
ARF1-213ENST00000540651 CHIC1Q5VXU3 224 aa38.58■■■■□ 3.77
ARF1-213ENST00000540651 NESP48681 1621 aa38.48■■■■□ 3.75
ARF1-213ENST00000540651 ABCC8Q09428 1581 aa38.34■■■■□ 3.73
ARF1-213ENST00000540651 LAMC3Q9Y6N6 1575 aa38.33■■■■□ 3.73
ARF1-213ENST00000540651 PRDM2Q13029 1718 aa38.29■■■■□ 3.72
ARF1-213ENST00000540651 FANCD2Q9BXW9 1451 aa38.15■■■■□ 3.7
ARF1-213ENST00000540651 TRIM41Q8WV44 630 aa38.13■■■■□ 3.7
ARF1-213ENST00000540651 WRNQ14191 1432 aaPredicted RBP eCLIP38.11■■■■□ 3.696e-7■■■■■ 33.4
ARF1-213ENST00000540651 PDS5BQ9NTI5 1447 aa38.04■■■■□ 3.68
ARF1-213ENST00000540651 SYNJ1O43426 1573 aa38.01■■■■□ 3.68
ARF1-213ENST00000540651 KIF21AQ7Z4S6 1674 aa37.94■■■■□ 3.66
ARF1-213ENST00000540651 CEP164Q9UPV0 1460 aa37.93■■■■□ 3.66
ARF1-213ENST00000540651 CUX1P39880 1505 aa37.93■■■■□ 3.66
ARF1-213ENST00000540651 TOP2BQ02880 1626 aa37.85■■■■□ 3.65
ARF1-213ENST00000540651 BIVM-ERCC5R4GMW8 1640 aa37.81■■■■□ 3.64
ARF1-213ENST00000540651 URB2Q14146 1524 aaKnown RBP37.74■■■■□ 3.63
ARF1-213ENST00000540651 TOPBP1Q92547 1522 aa37.7■■■■□ 3.62
ARF1-213ENST00000540651 DNMBPQ6XZF7 1577 aa37.69■■■■□ 3.62
ARF1-213ENST00000540651 ERCC6Q03468 1493 aa37.67■■■■□ 3.62
ARF1-213ENST00000540651 MRC2Q9UBG0 1479 aa37.61■■■■□ 3.61
ARF1-213ENST00000540651 FGD5Q6ZNL6 1462 aa37.57■■■■□ 3.61
ARF1-213ENST00000540651 SOGA1O94964 1423 aa37.53■■■■□ 3.6
ARF1-213ENST00000540651 POLA1P09884 1462 aaPredicted RBP37.48■■■■□ 3.59
ARF1-213ENST00000540651 THOC2Q8NI27 1593 aaKnown RBP37.47■■■■□ 3.59
ARF1-213ENST00000540651 FAM9AQ8IZU1 332 aaPredicted RBP37.47■■■■□ 3.59
ARF1-213ENST00000540651 RUSC2Q8N2Y8 1516 aa37.45■■■■□ 3.59
ARF1-213ENST00000540651 WDR62O43379 1518 aa37.45■■■■□ 3.59
ARF1-213ENST00000540651 RAD54L2Q9Y4B4 1467 aa37.38■■■■□ 3.57
ARF1-213ENST00000540651 CUX2O14529 1486 aa37.27■■■■□ 3.56
ARF1-213ENST00000540651 ABCA10Q8WWZ4 1543 aa37.22■■■■□ 3.55
ARF1-213ENST00000540651 EEA1Q15075 1411 aa37.21■■■■□ 3.55
ARF1-213ENST00000540651 TARBP1Q13395 1621 aaKnown RBP37.18■■■■□ 3.54
ARF1-213ENST00000540651 KIF27Q86VH2 1401 aa37.16■■■■□ 3.54
ARF1-213ENST00000540651 CSRNP3Q8WYN3 585 aa37.14■■■■□ 3.54
ARF1-213ENST00000540651 WDR97A6NE52 1622 aa37.14■■■■□ 3.54
ARF1-213ENST00000540651 LOC105371045A0A1W2PR82 267 aa37.12■■■■□ 3.53
ARF1-213ENST00000540651 IFT140Q96RY7 1462 aa37.06■■■■□ 3.52
ARF1-213ENST00000540651 TDRD9Q8NDG6 1382 aaKnown RBP37.05■■■■□ 3.52
ARF1-213ENST00000540651 EHMT2Q96KQ7 1210 aa36.98■■■■□ 3.51
ARF1-213ENST00000540651 ZNF608Q9ULD9 1512 aaPredicted RBP36.97■■■■□ 3.51
ARF1-213ENST00000540651 IGF1RP08069 1367 aa36.96■■■■□ 3.51
ARF1-213ENST00000540651 ABCA5Q8WWZ7 1642 aa36.96■■■■□ 3.51
ARF1-213ENST00000540651 AQRO60306 1485 aaKnown RBP eCLIP36.92■■■■□ 3.55e-7■■■■□ 21.3
ARF1-213ENST00000540651 GAPVD1Q14C86 1478 aa36.9■■■■□ 3.5
ARF1-213ENST00000540651 PRXQ9BXM0 1461 aa36.84■■■■□ 3.49
ARF1-213ENST00000540651 KIF21BO75037 1637 aa36.8■■■■□ 3.48
ARF1-213ENST00000540651 RAPGEF2Q9Y4G8 1499 aa36.77■■■■□ 3.48
ARF1-213ENST00000540651 EIF4G3O43432 1585 aaKnown RBP36.77■■■■□ 3.48
ARF1-213ENST00000540651 ERICH3Q5RHP9 1530 aa36.74■■■■□ 3.47
ARF1-213ENST00000540651 CARMIL1Q5VZK9 1371 aa36.73■■■■□ 3.47
ARF1-213ENST00000540651 GOLGA3Q08378 1498 aa36.71■■■■□ 3.47
ARF1-213ENST00000540651 PBRM1Q86U86 1689 aa36.7■■■■□ 3.47
ARF1-213ENST00000540651 GRIN2BQ13224 1484 aa36.68■■■■□ 3.46
ARF1-213ENST00000540651 CUL7Q14999 1698 aa36.61■■■■□ 3.45
ARF1-213ENST00000540651 UBTFP17480 764 aaKnown RBP36.58■■■■□ 3.45
ARF1-213ENST00000540651 SNAPC4Q5SXM2 1469 aa36.53■■■■□ 3.44
ARF1-213ENST00000540651 TNIKQ9UKE5 1360 aa36.53■■■■□ 3.44
ARF1-213ENST00000540651 ADAMTS12P58397 1594 aa36.51■■■■□ 3.44
ARF1-213ENST00000540651 FHAD1B1AJZ9 1412 aa36.48■■■■□ 3.43
ARF1-213ENST00000540651 MAGI1Q96QZ7 1491 aaPredicted RBP36.42■■■■□ 3.42
ARF1-213ENST00000540651 CEP162Q5TB80 1403 aa36.3■■■■□ 3.4
ARF1-213ENST00000540651 SYNJ2O15056 1496 aa36.29■■■■□ 3.4
ARF1-213ENST00000540651 GRIN2AQ12879 1464 aa36.26■■■■□ 3.39
ARF1-213ENST00000540651 CHMP7Q8WUX9 453 aaPredicted RBP36.23■■■■□ 3.39
ARF1-213ENST00000540651 FBLN2P98095 1184 aa36.21■■■■□ 3.39
ARF1-213ENST00000540651 RANGAP1P46060 587 aaPredicted RBP36.2■■■■□ 3.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms