RNA–Protein interactions for RNA: ENST00000470670.5

ARF1-204, Transcript of ADP ribosylation factor 1, humanhuman

TSL 3

Gene ARF1, Length 712 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF1-204ENST00000470670 NISCHQ9Y2I1 1504 aa35.28■■■■□ 3.24
ARF1-204ENST00000470670 CCDC180Q9P1Z9 1646 aa31.43■■■□□ 2.62
ARF1-204ENST00000470670 ABCC9O60706 1549 aa30.68■■■□□ 2.5
ARF1-204ENST00000470670 RB1CC1Q8TDY2 1594 aa29.51■■■□□ 2.31
ARF1-204ENST00000470670 NACADO15069 1562 aa29.46■■■□□ 2.31
ARF1-204ENST00000470670 ZCCHC6Q5VYS8 1495 aaKnown RBP29.45■■■□□ 2.31
ARF1-204ENST00000470670 DCAF8L2P0C7V8 631 aa29.32■■■□□ 2.28
ARF1-204ENST00000470670 MYO15BQ96JP2 1530 aa29.26■■■□□ 2.27
ARF1-204ENST00000470670 DCAF1Q9Y4B6 1507 aa29.17■■■□□ 2.26
ARF1-204ENST00000470670 UNC13AQ9UPW8 1703 aa28.97■■■□□ 2.23
ARF1-204ENST00000470670 SCRIBQ14160 1630 aa28.71■■■□□ 2.19
ARF1-204ENST00000470670 BICRAQ9NZM4 1560 aa28.67■■■□□ 2.18
ARF1-204ENST00000470670 PABPN1Q86U42 306 aaKnown RBP eCLIP28.59■■■□□ 2.17
ARF1-204ENST00000470670 SHROOM4Q9ULL8 1493 aa28.3■■■□□ 2.12
ARF1-204ENST00000470670 DNAJC5BQ9UF47 199 aa28.04■■■□□ 2.08
ARF1-204ENST00000470670 EIF4G1Q04637 1599 aaKnown RBP27.9■■■□□ 2.06
ARF1-204ENST00000470670 CC2D2AQ9P2K1 1620 aa27.78■■■□□ 2.04
ARF1-204ENST00000470670 CECR2Q9BXF3 1484 aa27.53■■■□□ 2
ARF1-204ENST00000470670 SMARCA4P51532 1647 aa27.43■■□□□ 1.98
ARF1-204ENST00000470670 BAZ1AQ9NRL2 1556 aaPredicted RBP27.35■■□□□ 1.97
ARF1-204ENST00000470670 MROH2BQ7Z745 1585 aa27.23■■□□□ 1.95
ARF1-204ENST00000470670 ATAD2BQ9ULI0 1458 aa27.2■■□□□ 1.95
ARF1-204ENST00000470670 SMARCA2P51531 1590 aa27.18■■□□□ 1.94
ARF1-204ENST00000470670 NCAPD3P42695 1498 aa27.14■■□□□ 1.94
ARF1-204ENST00000470670 PEG3Q9GZU2 1588 aa27.13■■□□□ 1.93
ARF1-204ENST00000470670 HMGXB3Q12766 1538 aa27.1■■□□□ 1.93
ARF1-204ENST00000470670 BAZ1BQ9UIG0 1483 aaKnown RBP27■■□□□ 1.91
ARF1-204ENST00000470670 WIZO95785 1651 aa26.97■■□□□ 1.91
ARF1-204ENST00000470670 RSF1Q96T23 1441 aaPredicted RBP26.87■■□□□ 1.89
ARF1-204ENST00000470670 TOP2AP11388 1531 aaKnown RBP26.66■■□□□ 1.86
ARF1-204ENST00000470670 NESP48681 1621 aa26.57■■□□□ 1.84
ARF1-204ENST00000470670 LAMC3Q9Y6N6 1575 aa26.48■■□□□ 1.83
ARF1-204ENST00000470670 ERCC6Q03468 1493 aa26.41■■□□□ 1.82
ARF1-204ENST00000470670 CADPSQ9ULU8 1353 aa26.33■■□□□ 1.81
ARF1-204ENST00000470670 KIF21AQ7Z4S6 1674 aa26.33■■□□□ 1.81
ARF1-204ENST00000470670 CCDC88BA6NC98 1476 aa26.29■■□□□ 1.8
ARF1-204ENST00000470670 THOC2Q8NI27 1593 aaKnown RBP26.24■■□□□ 1.79
ARF1-204ENST00000470670 CFTRP13569 1480 aa26.23■■□□□ 1.79
ARF1-204ENST00000470670 PDS5BQ9NTI5 1447 aa26.22■■□□□ 1.79
ARF1-204ENST00000470670 PRDM2Q13029 1718 aa26.18■■□□□ 1.78
ARF1-204ENST00000470670 SUPT5HO00267 1087 aaKnown RBP26.14■■□□□ 1.78
ARF1-204ENST00000470670 CUX2O14529 1486 aa26.11■■□□□ 1.77
ARF1-204ENST00000470670 FANCD2Q9BXW9 1451 aa26.1■■□□□ 1.77
ARF1-204ENST00000470670 CEP164Q9UPV0 1460 aa26.09■■□□□ 1.77
ARF1-204ENST00000470670 MRC2Q9UBG0 1479 aa26.04■■□□□ 1.76
ARF1-204ENST00000470670 WDR62O43379 1518 aa25.98■■□□□ 1.75
ARF1-204ENST00000470670 URB2Q14146 1524 aaKnown RBP25.88■■□□□ 1.73
ARF1-204ENST00000470670 TOPBP1Q92547 1522 aa25.71■■□□□ 1.71
ARF1-204ENST00000470670 DNMBPQ6XZF7 1577 aa25.7■■□□□ 1.71
ARF1-204ENST00000470670 ABCC8Q09428 1581 aa25.61■■□□□ 1.69
ARF1-204ENST00000470670 CUX1P39880 1505 aa25.56■■□□□ 1.68
ARF1-204ENST00000470670 IFT140Q96RY7 1462 aa25.5■■□□□ 1.67
ARF1-204ENST00000470670 POLA1P09884 1462 aaPredicted RBP25.49■■□□□ 1.67
ARF1-204ENST00000470670 TARBP1Q13395 1621 aaKnown RBP25.46■■□□□ 1.67
ARF1-204ENST00000470670 FGD5Q6ZNL6 1462 aa25.45■■□□□ 1.66
ARF1-204ENST00000470670 ZNF608Q9ULD9 1512 aaPredicted RBP25.43■■□□□ 1.66
ARF1-204ENST00000470670 EIF4G3O43432 1585 aaKnown RBP25.4■■□□□ 1.66
ARF1-204ENST00000470670 RAD54L2Q9Y4B4 1467 aa25.38■■□□□ 1.65
ARF1-204ENST00000470670 SYNJ1O43426 1573 aa25.38■■□□□ 1.65
ARF1-204ENST00000470670 BIVM-ERCC5R4GMW8 1640 aa25.37■■□□□ 1.65
ARF1-204ENST00000470670 WRNQ14191 1432 aaPredicted RBP eCLIP25.34■■□□□ 1.656e-7■■■■■ 33.4
ARF1-204ENST00000470670 WDR97A6NE52 1622 aa25.34■■□□□ 1.65
ARF1-204ENST00000470670 TOP2BQ02880 1626 aa25.34■■□□□ 1.65
ARF1-204ENST00000470670 SOGA1O94964 1423 aa25.3■■□□□ 1.64
ARF1-204ENST00000470670 AQRO60306 1485 aaKnown RBP eCLIP25.24■■□□□ 1.635e-7■■■■□ 21.3
ARF1-204ENST00000470670 TDRD9Q8NDG6 1382 aaKnown RBP25.18■■□□□ 1.62
ARF1-204ENST00000470670 ABCA10Q8WWZ4 1543 aa25.17■■□□□ 1.62
ARF1-204ENST00000470670 DNAJC5Q9H3Z4 198 aa25.16■■□□□ 1.62
ARF1-204ENST00000470670 ABCA5Q8WWZ7 1642 aa25.15■■□□□ 1.62
ARF1-204ENST00000470670 PBRM1Q86U86 1689 aa25.13■■□□□ 1.61
ARF1-204ENST00000470670 CHD1O14646 1710 aa25.09■■□□□ 1.61
ARF1-204ENST00000470670 SNAPC4Q5SXM2 1469 aa25.08■■□□□ 1.6
ARF1-204ENST00000470670 GAPVD1Q14C86 1478 aa25.06■■□□□ 1.6
ARF1-204ENST00000470670 GRIN2BQ13224 1484 aa25.05■■□□□ 1.6
ARF1-204ENST00000470670 MAGI1Q96QZ7 1491 aaPredicted RBP24.99■■□□□ 1.59
ARF1-204ENST00000470670 ADAMTS12P58397 1594 aa24.93■■□□□ 1.58
ARF1-204ENST00000470670 OSCARQ8IYS5 282 aa24.9■■□□□ 1.58
ARF1-204ENST00000470670 SYNJ2O15056 1496 aa24.89■■□□□ 1.58
ARF1-204ENST00000470670 ERICH3Q5RHP9 1530 aa24.86■■□□□ 1.57
ARF1-204ENST00000470670 FBLN2P98095 1184 aa24.86■■□□□ 1.57
ARF1-204ENST00000470670 KIF27Q86VH2 1401 aa24.78■■□□□ 1.56
ARF1-204ENST00000470670 CLASP1Q7Z460 1538 aa24.77■■□□□ 1.56
ARF1-204ENST00000470670 CHMP7Q8WUX9 453 aaPredicted RBP24.77■■□□□ 1.56
ARF1-204ENST00000470670 GRIN2AQ12879 1464 aa24.77■■□□□ 1.56
ARF1-204ENST00000470670 FHAD1B1AJZ9 1412 aa24.75■■□□□ 1.55
ARF1-204ENST00000470670 RIMBP3CA6NJZ7 1639 aa24.71■■□□□ 1.55
ARF1-204ENST00000470670 RIMBP3BA6NNM3 1639 aa24.71■■□□□ 1.55
ARF1-204ENST00000470670 RIMBP3Q9UFD9 1639 aa24.71■■□□□ 1.55
ARF1-204ENST00000470670 CUL7Q14999 1698 aa24.7■■□□□ 1.54
ARF1-204ENST00000470670 CEP170Q5SW79 1584 aa24.7■■□□□ 1.54
ARF1-204ENST00000470670 ARHGEF11O15085 1522 aa24.67■■□□□ 1.54
ARF1-204ENST00000470670 TRIM41Q8WV44 630 aa24.65■■□□□ 1.54
ARF1-204ENST00000470670 NUP160Q12769 1436 aa24.64■■□□□ 1.54
ARF1-204ENST00000470670 RUSC2Q8N2Y8 1516 aa24.63■■□□□ 1.53
ARF1-204ENST00000470670 IGF1RP08069 1367 aa24.63■■□□□ 1.53
ARF1-204ENST00000470670 SHROOM2Q13796 1616 aa24.5■■□□□ 1.51
ARF1-204ENST00000470670 CARMIL1Q5VZK9 1371 aa24.5■■□□□ 1.51
ARF1-204ENST00000470670 ARAP1Q96P48 1450 aa24.5■■□□□ 1.51
ARF1-204ENST00000470670 ERCC6L2Q5T890 1561 aa24.46■■□□□ 1.51
ARF1-204ENST00000470670 CHIC1Q5VXU3 224 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms