RNA–Protein interactions for RNA: ENST00000508689.1

MATR3-213, Transcript of matrin 3, humanhuman

TSL 4

Gene MATR3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-213ENST00000508689 NISCHQ9Y2I1 1504 aa40.22■■■■■ 4.03
MATR3-213ENST00000508689 CCDC180Q9P1Z9 1646 aa35.74■■■■□ 3.31
MATR3-213ENST00000508689 ABCC9O60706 1549 aa35.33■■■■□ 3.25
MATR3-213ENST00000508689 DCAF8L2P0C7V8 631 aa33.72■■■□□ 2.99
MATR3-213ENST00000508689 RB1CC1Q8TDY2 1594 aa33.71■■■□□ 2.99
MATR3-213ENST00000508689 NACADO15069 1562 aa33.62■■■□□ 2.97
MATR3-213ENST00000508689 ZCCHC6Q5VYS8 1495 aaKnown RBP33.48■■■□□ 2.95
MATR3-213ENST00000508689 MYO15BQ96JP2 1530 aa33.28■■■□□ 2.92
MATR3-213ENST00000508689 UNC13AQ9UPW8 1703 aa33.2■■■□□ 2.91
MATR3-213ENST00000508689 DCAF1Q9Y4B6 1507 aa33.13■■■□□ 2.89
MATR3-213ENST00000508689 PABPN1Q86U42 306 aaKnown RBP eCLIP33.04■■■□□ 2.88
MATR3-213ENST00000508689 BICRAQ9NZM4 1560 aa32.92■■■□□ 2.86
MATR3-213ENST00000508689 SCRIBQ14160 1630 aa32.8■■■□□ 2.84
MATR3-213ENST00000508689 DNAJC5BQ9UF47 199 aa32.72■■■□□ 2.83
MATR3-213ENST00000508689 SHROOM4Q9ULL8 1493 aa32.18■■■□□ 2.74
MATR3-213ENST00000508689 EIF4G1Q04637 1599 aaKnown RBP31.96■■■□□ 2.71
MATR3-213ENST00000508689 CC2D2AQ9P2K1 1620 aa31.91■■■□□ 2.7
MATR3-213ENST00000508689 CECR2Q9BXF3 1484 aa31.67■■■□□ 2.66
MATR3-213ENST00000508689 SMARCA4P51532 1647 aa31.27■■■□□ 2.6
MATR3-213ENST00000508689 ATAD2BQ9ULI0 1458 aa31.13■■■□□ 2.57
MATR3-213ENST00000508689 MROH2BQ7Z745 1585 aa31.11■■■□□ 2.57
MATR3-213ENST00000508689 BAZ1AQ9NRL2 1556 aaPredicted RBP31.1■■■□□ 2.57
MATR3-213ENST00000508689 NCAPD3P42695 1498 aa31.06■■■□□ 2.56
MATR3-213ENST00000508689 SMARCA2P51531 1590 aa30.96■■■□□ 2.55
MATR3-213ENST00000508689 PEG3Q9GZU2 1588 aa30.88■■■□□ 2.53
MATR3-213ENST00000508689 HMGXB3Q12766 1538 aa30.88■■■□□ 2.53
MATR3-213ENST00000508689 BAZ1BQ9UIG0 1483 aaKnown RBP30.82■■■□□ 2.52
MATR3-213ENST00000508689 WIZO95785 1651 aa30.79■■■□□ 2.52
MATR3-213ENST00000508689 AEBP2Q6ZN18 517 aaPredicted RBP30.63■■■□□ 2.49
MATR3-213ENST00000508689 RSF1Q96T23 1441 aaPredicted RBP30.63■■■□□ 2.49
MATR3-213ENST00000508689 NESP48681 1621 aa30.6■■■□□ 2.49
MATR3-213ENST00000508689 ERCC6Q03468 1493 aa30.32■■■□□ 2.44
MATR3-213ENST00000508689 TOP2AP11388 1531 aaKnown RBP30.32■■■□□ 2.44
MATR3-213ENST00000508689 LAMC3Q9Y6N6 1575 aa30.24■■■□□ 2.43
MATR3-213ENST00000508689 KIF21AQ7Z4S6 1674 aa30.18■■■□□ 2.42
MATR3-213ENST00000508689 CADPSQ9ULU8 1353 aa30.15■■■□□ 2.42
MATR3-213ENST00000508689 THOC2Q8NI27 1593 aaKnown RBP30.08■■■□□ 2.41
MATR3-213ENST00000508689 CCDC88BA6NC98 1476 aa30.02■■■□□ 2.4
MATR3-213ENST00000508689 CUX2O14529 1486 aa30■■■□□ 2.39
MATR3-213ENST00000508689 PDS5BQ9NTI5 1447 aa30■■■□□ 2.39
MATR3-213ENST00000508689 CFTRP13569 1480 aa29.96■■■□□ 2.39
MATR3-213ENST00000508689 FANCD2Q9BXW9 1451 aa29.87■■■□□ 2.37
MATR3-213ENST00000508689 MRC2Q9UBG0 1479 aa29.8■■■□□ 2.36
MATR3-213ENST00000508689 CEP164Q9UPV0 1460 aa29.8■■■□□ 2.36
MATR3-213ENST00000508689 SUPT5HO00267 1087 aaKnown RBP29.78■■■□□ 2.36
MATR3-213ENST00000508689 PRDM2Q13029 1718 aa29.74■■■□□ 2.35
MATR3-213ENST00000508689 WDR62O43379 1518 aa29.73■■■□□ 2.35
MATR3-213ENST00000508689 URB2Q14146 1524 aaKnown RBP29.66■■■□□ 2.34
MATR3-213ENST00000508689 CHIC1Q5VXU3 224 aa29.57■■■□□ 2.32
MATR3-213ENST00000508689 TOPBP1Q92547 1522 aa29.4■■■□□ 2.3
MATR3-213ENST00000508689 DNAJC5Q9H3Z4 198 aa29.36■■■□□ 2.29
MATR3-213ENST00000508689 DNMBPQ6XZF7 1577 aa29.29■■■□□ 2.28
MATR3-213ENST00000508689 ZNF608Q9ULD9 1512 aaPredicted RBP29.24■■■□□ 2.27
MATR3-213ENST00000508689 CUX1P39880 1505 aa29.18■■■□□ 2.26
MATR3-213ENST00000508689 IFT140Q96RY7 1462 aa29.15■■■□□ 2.26
MATR3-213ENST00000508689 ABCC8Q09428 1581 aa29.14■■■□□ 2.26
MATR3-213ENST00000508689 POLA1P09884 1462 aaPredicted RBP29.14■■■□□ 2.26
MATR3-213ENST00000508689 TARBP1Q13395 1621 aaKnown RBP29.12■■■□□ 2.25
MATR3-213ENST00000508689 RAD54L2Q9Y4B4 1467 aa29.1■■■□□ 2.25
MATR3-213ENST00000508689 FGD5Q6ZNL6 1462 aa29.05■■■□□ 2.24
MATR3-213ENST00000508689 EIF4G3O43432 1585 aaKnown RBP29.04■■■□□ 2.24
MATR3-213ENST00000508689 AQRO60306 1485 aaKnown RBP eCLIP29■■■□□ 2.23
MATR3-213ENST00000508689 SOGA1O94964 1423 aa28.96■■■□□ 2.23
MATR3-213ENST00000508689 TDRD9Q8NDG6 1382 aaKnown RBP28.91■■■□□ 2.22
MATR3-213ENST00000508689 SYNJ1O43426 1573 aa28.9■■■□□ 2.22
MATR3-213ENST00000508689 WDR97A6NE52 1622 aa28.85■■■□□ 2.21
MATR3-213ENST00000508689 WRNQ14191 1432 aaPredicted RBP eCLIP28.81■■■□□ 2.26e-9■■■■■ 30.6
MATR3-213ENST00000508689 BIVM-ERCC5R4GMW8 1640 aa28.8■■■□□ 2.2
MATR3-213ENST00000508689 TOP2BQ02880 1626 aa28.79■■■□□ 2.2
MATR3-213ENST00000508689 CHD1O14646 1710 aa28.75■■■□□ 2.19
MATR3-213ENST00000508689 OSCARQ8IYS5 282 aa28.74■■■□□ 2.19
MATR3-213ENST00000508689 SNAPC4Q5SXM2 1469 aa28.7■■■□□ 2.18
MATR3-213ENST00000508689 ABCA10Q8WWZ4 1543 aa28.69■■■□□ 2.18
MATR3-213ENST00000508689 ABCA5Q8WWZ7 1642 aa28.66■■■□□ 2.18
MATR3-213ENST00000508689 PBRM1Q86U86 1689 aa28.65■■■□□ 2.18
MATR3-213ENST00000508689 GAPVD1Q14C86 1478 aa28.63■■■□□ 2.17
MATR3-213ENST00000508689 FBLN2P98095 1184 aa28.61■■■□□ 2.17
MATR3-213ENST00000508689 GRIN2BQ13224 1484 aa28.6■■■□□ 2.17
MATR3-213ENST00000508689 MAGI1Q96QZ7 1491 aaPredicted RBP28.52■■■□□ 2.16
MATR3-213ENST00000508689 RIMBP3CA6NJZ7 1639 aa28.47■■■□□ 2.15
MATR3-213ENST00000508689 RIMBP3BA6NNM3 1639 aa28.47■■■□□ 2.15
MATR3-213ENST00000508689 RIMBP3Q9UFD9 1639 aa28.47■■■□□ 2.15
MATR3-213ENST00000508689 SYNJ2O15056 1496 aa28.45■■■□□ 2.14
MATR3-213ENST00000508689 CHMP7Q8WUX9 453 aaPredicted RBP28.43■■■□□ 2.14
MATR3-213ENST00000508689 TRIM41Q8WV44 630 aa28.43■■■□□ 2.14
MATR3-213ENST00000508689 ADAMTS12P58397 1594 aa28.4■■■□□ 2.14
MATR3-213ENST00000508689 ARHGEF11O15085 1522 aa28.39■■■□□ 2.14
MATR3-213ENST00000508689 CLASP1Q7Z460 1538 aa28.38■■■□□ 2.13
MATR3-213ENST00000508689 ERICH3Q5RHP9 1530 aa28.3■■■□□ 2.12
MATR3-213ENST00000508689 GRIN2AQ12879 1464 aa28.28■■■□□ 2.12
MATR3-213ENST00000508689 CEP170Q5SW79 1584 aa28.26■■■□□ 2.11
MATR3-213ENST00000508689 FHAD1B1AJZ9 1412 aa28.25■■■□□ 2.11
MATR3-213ENST00000508689 ARAP1Q96P48 1450 aa28.21■■■□□ 2.11
MATR3-213ENST00000508689 IGF1RP08069 1367 aa28.17■■■□□ 2.1
MATR3-213ENST00000508689 NUP160Q12769 1436 aa28.17■■■□□ 2.1
MATR3-213ENST00000508689 RUSC2Q8N2Y8 1516 aa28.15■■■□□ 2.1
MATR3-213ENST00000508689 KIF27Q86VH2 1401 aa28.15■■■□□ 2.1
MATR3-213ENST00000508689 ERCC6L2Q5T890 1561 aa28.15■■■□□ 2.1
MATR3-213ENST00000508689 CYB5RLQ6IPT4 315 aa28.14■■■□□ 2.1
MATR3-213ENST00000508689 CUL7Q14999 1698 aa28.01■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms