RNA–Protein interactions for RNA: ENST00000454226.5

EPB41L1-216, Transcript of erythrocyte membrane protein band 4.1 like 1, humanhuman

TSL 3

Gene EPB41L1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L1-216ENST00000454226 NISCHQ9Y2I1 1504 aa33.43■■■□□ 2.94
EPB41L1-216ENST00000454226 CCDC180Q9P1Z9 1646 aa29.76■■■□□ 2.35
EPB41L1-216ENST00000454226 ABCC9O60706 1549 aa29.41■■■□□ 2.3
EPB41L1-216ENST00000454226 DCAF8L2P0C7V8 631 aa28.2■■■□□ 2.1
EPB41L1-216ENST00000454226 RB1CC1Q8TDY2 1594 aa28.12■■■□□ 2.09
EPB41L1-216ENST00000454226 NACADO15069 1562 aa28.02■■■□□ 2.08
EPB41L1-216ENST00000454226 ZCCHC6Q5VYS8 1495 aaKnown RBP27.82■■■□□ 2.04
EPB41L1-216ENST00000454226 MYO15BQ96JP2 1530 aa27.71■■■□□ 2.03
EPB41L1-216ENST00000454226 DCAF1Q9Y4B6 1507 aa27.57■■■□□ 2
EPB41L1-216ENST00000454226 UNC13AQ9UPW8 1703 aa27.51■■□□□ 1.99
EPB41L1-216ENST00000454226 PABPN1Q86U42 306 aaKnown RBP eCLIP27.48■■□□□ 1.99
EPB41L1-216ENST00000454226 SCRIBQ14160 1630 aa27.28■■□□□ 1.96
EPB41L1-216ENST00000454226 BICRAQ9NZM4 1560 aa27.26■■□□□ 1.96
EPB41L1-216ENST00000454226 DNAJC5BQ9UF47 199 aa27.08■■□□□ 1.93
EPB41L1-216ENST00000454226 SHROOM4Q9ULL8 1493 aa26.87■■□□□ 1.89
EPB41L1-216ENST00000454226 EIF4G1Q04637 1599 aaKnown RBP26.58■■□□□ 1.85
EPB41L1-216ENST00000454226 CC2D2AQ9P2K1 1620 aa26.54■■□□□ 1.84
EPB41L1-216ENST00000454226 CECR2Q9BXF3 1484 aa26.39■■□□□ 1.82
EPB41L1-216ENST00000454226 SMARCA4P51532 1647 aa26■■□□□ 1.75
EPB41L1-216ENST00000454226 BAZ1AQ9NRL2 1556 aaPredicted RBP25.93■■□□□ 1.74
EPB41L1-216ENST00000454226 ATAD2BQ9ULI0 1458 aa25.88■■□□□ 1.73
EPB41L1-216ENST00000454226 SMARCA2P51531 1590 aa25.84■■□□□ 1.73
EPB41L1-216ENST00000454226 NCAPD3P42695 1498 aa25.84■■□□□ 1.73
EPB41L1-216ENST00000454226 MROH2BQ7Z745 1585 aa25.81■■□□□ 1.72
EPB41L1-216ENST00000454226 HMGXB3Q12766 1538 aa25.72■■□□□ 1.71
EPB41L1-216ENST00000454226 BAZ1BQ9UIG0 1483 aaKnown RBP25.71■■□□□ 1.71
EPB41L1-216ENST00000454226 PEG3Q9GZU2 1588 aa25.65■■□□□ 1.7
EPB41L1-216ENST00000454226 WIZO95785 1651 aa25.55■■□□□ 1.68
EPB41L1-216ENST00000454226 RSF1Q96T23 1441 aaPredicted RBP25.43■■□□□ 1.66
EPB41L1-216ENST00000454226 NESP48681 1621 aa25.39■■□□□ 1.66
EPB41L1-216ENST00000454226 ERCC6Q03468 1493 aa25.36■■□□□ 1.65
EPB41L1-216ENST00000454226 TOP2AP11388 1531 aaKnown RBP25.22■■□□□ 1.63
EPB41L1-216ENST00000454226 LAMC3Q9Y6N6 1575 aa25.21■■□□□ 1.63
EPB41L1-216ENST00000454226 CADPSQ9ULU8 1353 aa25.12■■□□□ 1.61
EPB41L1-216ENST00000454226 PDS5BQ9NTI5 1447 aa25.07■■□□□ 1.6
EPB41L1-216ENST00000454226 KIF21AQ7Z4S6 1674 aa25.07■■□□□ 1.6
EPB41L1-216ENST00000454226 CUX2O14529 1486 aa25.03■■□□□ 1.6
EPB41L1-216ENST00000454226 THOC2Q8NI27 1593 aaKnown RBP24.98■■□□□ 1.59
EPB41L1-216ENST00000454226 CCDC88BA6NC98 1476 aa24.94■■□□□ 1.58
EPB41L1-216ENST00000454226 CFTRP13569 1480 aa24.92■■□□□ 1.58
EPB41L1-216ENST00000454226 FANCD2Q9BXW9 1451 aa24.88■■□□□ 1.57
EPB41L1-216ENST00000454226 CEP164Q9UPV0 1460 aa24.86■■□□□ 1.57
EPB41L1-216ENST00000454226 MRC2Q9UBG0 1479 aa24.84■■□□□ 1.57
EPB41L1-216ENST00000454226 SUPT5HO00267 1087 aaKnown RBP24.84■■□□□ 1.57
EPB41L1-216ENST00000454226 PRDM2Q13029 1718 aa24.75■■□□□ 1.55
EPB41L1-216ENST00000454226 WDR62O43379 1518 aa24.74■■□□□ 1.55
EPB41L1-216ENST00000454226 URB2Q14146 1524 aaKnown RBP24.63■■□□□ 1.53
EPB41L1-216ENST00000454226 DNAJC5Q9H3Z4 198 aa24.46■■□□□ 1.51
EPB41L1-216ENST00000454226 TOPBP1Q92547 1522 aa24.45■■□□□ 1.51
EPB41L1-216ENST00000454226 DNMBPQ6XZF7 1577 aa24.4■■□□□ 1.5
EPB41L1-216ENST00000454226 ABCC8Q09428 1581 aa24.37■■□□□ 1.49
EPB41L1-216ENST00000454226 IFT140Q96RY7 1462 aa24.31■■□□□ 1.48
EPB41L1-216ENST00000454226 ZNF608Q9ULD9 1512 aaPredicted RBP24.27■■□□□ 1.48
EPB41L1-216ENST00000454226 POLA1P09884 1462 aaPredicted RBP24.24■■□□□ 1.47
EPB41L1-216ENST00000454226 CUX1P39880 1505 aa24.22■■□□□ 1.47
EPB41L1-216ENST00000454226 FGD5Q6ZNL6 1462 aa24.18■■□□□ 1.46
EPB41L1-216ENST00000454226 RAD54L2Q9Y4B4 1467 aa24.18■■□□□ 1.46
EPB41L1-216ENST00000454226 TARBP1Q13395 1621 aaKnown RBP24.17■■□□□ 1.46
EPB41L1-216ENST00000454226 EIF4G3O43432 1585 aaKnown RBP24.16■■□□□ 1.46
EPB41L1-216ENST00000454226 SOGA1O94964 1423 aa24.14■■□□□ 1.45
EPB41L1-216ENST00000454226 AQRO60306 1485 aaKnown RBP eCLIP24.12■■□□□ 1.45
EPB41L1-216ENST00000454226 TDRD9Q8NDG6 1382 aaKnown RBP24.06■■□□□ 1.44
EPB41L1-216ENST00000454226 OSCARQ8IYS5 282 aa24.02■■□□□ 1.44
EPB41L1-216ENST00000454226 WRNQ14191 1432 aaPredicted RBP eCLIP24.01■■□□□ 1.43
EPB41L1-216ENST00000454226 SYNJ1O43426 1573 aa23.98■■□□□ 1.43
EPB41L1-216ENST00000454226 FBLN2P98095 1184 aa23.95■■□□□ 1.42
EPB41L1-216ENST00000454226 WDR97A6NE52 1622 aa23.94■■□□□ 1.42
EPB41L1-216ENST00000454226 TOP2BQ02880 1626 aa23.94■■□□□ 1.42
EPB41L1-216ENST00000454226 BIVM-ERCC5R4GMW8 1640 aa23.93■■□□□ 1.42
EPB41L1-216ENST00000454226 CHD1O14646 1710 aa23.9■■□□□ 1.42
EPB41L1-216ENST00000454226 SNAPC4Q5SXM2 1469 aa23.89■■□□□ 1.42
EPB41L1-216ENST00000454226 ABCA10Q8WWZ4 1543 aa23.88■■□□□ 1.41
EPB41L1-216ENST00000454226 GRIN2BQ13224 1484 aa23.86■■□□□ 1.41
EPB41L1-216ENST00000454226 GAPVD1Q14C86 1478 aa23.86■■□□□ 1.41
EPB41L1-216ENST00000454226 PBRM1Q86U86 1689 aa23.83■■□□□ 1.41
EPB41L1-216ENST00000454226 ABCA5Q8WWZ7 1642 aa23.81■■□□□ 1.4
EPB41L1-216ENST00000454226 MAGI1Q96QZ7 1491 aaPredicted RBP23.79■■□□□ 1.4
EPB41L1-216ENST00000454226 CHMP7Q8WUX9 453 aaPredicted RBP23.78■■□□□ 1.4
EPB41L1-216ENST00000454226 TRIM41Q8WV44 630 aa23.77■■□□□ 1.4
EPB41L1-216ENST00000454226 SYNJ2O15056 1496 aa23.71■■□□□ 1.39
EPB41L1-216ENST00000454226 RIMBP3CA6NJZ7 1639 aa23.67■■□□□ 1.38
EPB41L1-216ENST00000454226 RIMBP3BA6NNM3 1639 aa23.67■■□□□ 1.38
EPB41L1-216ENST00000454226 RIMBP3Q9UFD9 1639 aa23.67■■□□□ 1.38
EPB41L1-216ENST00000454226 ARHGEF11O15085 1522 aa23.64■■□□□ 1.38
EPB41L1-216ENST00000454226 ADAMTS12P58397 1594 aa23.62■■□□□ 1.37
EPB41L1-216ENST00000454226 ERICH3Q5RHP9 1530 aa23.58■■□□□ 1.36
EPB41L1-216ENST00000454226 CLASP1Q7Z460 1538 aa23.57■■□□□ 1.36
EPB41L1-216ENST00000454226 GRIN2AQ12879 1464 aa23.56■■□□□ 1.36
EPB41L1-216ENST00000454226 FHAD1B1AJZ9 1412 aa23.55■■□□□ 1.36
EPB41L1-216ENST00000454226 KIF27Q86VH2 1401 aa23.51■■□□□ 1.35
EPB41L1-216ENST00000454226 CYB5RLQ6IPT4 315 aa23.49■■□□□ 1.35
EPB41L1-216ENST00000454226 CEP170Q5SW79 1584 aa23.47■■□□□ 1.35
EPB41L1-216ENST00000454226 ARAP1Q96P48 1450 aa23.45■■□□□ 1.34
EPB41L1-216ENST00000454226 NUP160Q12769 1436 aa23.42■■□□□ 1.34
EPB41L1-216ENST00000454226 IGF1RP08069 1367 aa23.41■■□□□ 1.34
EPB41L1-216ENST00000454226 CUL7Q14999 1698 aa23.36■■□□□ 1.33
EPB41L1-216ENST00000454226 RUSC2Q8N2Y8 1516 aa23.31■■□□□ 1.32
EPB41L1-216ENST00000454226 ERCC6L2Q5T890 1561 aa23.31■■□□□ 1.32
EPB41L1-216ENST00000454226 CARMIL1Q5VZK9 1371 aa23.3■■□□□ 1.32
EPB41L1-216ENST00000454226 SHROOM2Q13796 1616 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 376.2 ms