RNA–Protein interactions for RNA: ENST00000479336.1

EPB41L1-217, Transcript of erythrocyte membrane protein band 4.1 like 1, humanhuman

TSL 3

Gene EPB41L1, Length 846 nt, Biotype processed transcript, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L1-217ENST00000479336 NISCHQ9Y2I1 1504 aa32.41■■■□□ 2.78
EPB41L1-217ENST00000479336 ABCC9O60706 1549 aa29.74■■■□□ 2.35
EPB41L1-217ENST00000479336 CCDC180Q9P1Z9 1646 aa29.33■■■□□ 2.29
EPB41L1-217ENST00000479336 DNAJC5BQ9UF47 199 aa28.23■■■□□ 2.11
EPB41L1-217ENST00000479336 RB1CC1Q8TDY2 1594 aa28.01■■■□□ 2.07
EPB41L1-217ENST00000479336 UNC13AQ9UPW8 1703 aa27.82■■■□□ 2.04
EPB41L1-217ENST00000479336 NACADO15069 1562 aa27.66■■■□□ 2.02
EPB41L1-217ENST00000479336 PABPN1Q86U42 306 aaKnown RBP eCLIP27.57■■■□□ 2
EPB41L1-217ENST00000479336 DCAF8L2P0C7V8 631 aa27.51■■□□□ 1.99
EPB41L1-217ENST00000479336 BICRAQ9NZM4 1560 aa27.39■■□□□ 1.98
EPB41L1-217ENST00000479336 MYO15BQ96JP2 1530 aa27.03■■□□□ 1.92
EPB41L1-217ENST00000479336 CC2D2AQ9P2K1 1620 aa26.87■■□□□ 1.89
EPB41L1-217ENST00000479336 SCRIBQ14160 1630 aa26.84■■□□□ 1.89
EPB41L1-217ENST00000479336 ZCCHC6Q5VYS8 1495 aaKnown RBP26.8■■□□□ 1.88
EPB41L1-217ENST00000479336 CECR2Q9BXF3 1484 aa26.72■■□□□ 1.87
EPB41L1-217ENST00000479336 EIF4G1Q04637 1599 aaKnown RBP26.66■■□□□ 1.86
EPB41L1-217ENST00000479336 DCAF1Q9Y4B6 1507 aa26.61■■□□□ 1.85
EPB41L1-217ENST00000479336 SHROOM4Q9ULL8 1493 aa26.58■■□□□ 1.85
EPB41L1-217ENST00000479336 DNAJC5Q9H3Z4 198 aa25.97■■□□□ 1.75
EPB41L1-217ENST00000479336 ERCC6Q03468 1493 aa25.58■■□□□ 1.69
EPB41L1-217ENST00000479336 CUX2O14529 1486 aa25.57■■□□□ 1.68
EPB41L1-217ENST00000479336 NESP48681 1621 aa25.51■■□□□ 1.67
EPB41L1-217ENST00000479336 NCAPD3P42695 1498 aa25.49■■□□□ 1.67
EPB41L1-217ENST00000479336 SMARCA4P51532 1647 aa25.48■■□□□ 1.67
EPB41L1-217ENST00000479336 ATAD2BQ9ULI0 1458 aa25.47■■□□□ 1.67
EPB41L1-217ENST00000479336 HMGXB3Q12766 1538 aa25.36■■□□□ 1.65
EPB41L1-217ENST00000479336 SMARCA2P51531 1590 aa25.33■■□□□ 1.65
EPB41L1-217ENST00000479336 THOC2Q8NI27 1593 aaKnown RBP25.33■■□□□ 1.65
EPB41L1-217ENST00000479336 KIF21AQ7Z4S6 1674 aa25.3■■□□□ 1.64
EPB41L1-217ENST00000479336 BAZ1BQ9UIG0 1483 aaKnown RBP25.21■■□□□ 1.63
EPB41L1-217ENST00000479336 BAZ1AQ9NRL2 1556 aaPredicted RBP25.14■■□□□ 1.62
EPB41L1-217ENST00000479336 PEG3Q9GZU2 1588 aa25.1■■□□□ 1.61
EPB41L1-217ENST00000479336 MROH2BQ7Z745 1585 aa25.09■■□□□ 1.61
EPB41L1-217ENST00000479336 LAMC3Q9Y6N6 1575 aa25.08■■□□□ 1.61
EPB41L1-217ENST00000479336 WIZO95785 1651 aa24.89■■□□□ 1.58
EPB41L1-217ENST00000479336 TRIM41Q8WV44 630 aa24.85■■□□□ 1.57
EPB41L1-217ENST00000479336 PDS5BQ9NTI5 1447 aa24.8■■□□□ 1.56
EPB41L1-217ENST00000479336 MRC2Q9UBG0 1479 aa24.75■■□□□ 1.55
EPB41L1-217ENST00000479336 WDR62O43379 1518 aa24.75■■□□□ 1.55
EPB41L1-217ENST00000479336 CADPSQ9ULU8 1353 aa24.7■■□□□ 1.55
EPB41L1-217ENST00000479336 CEP164Q9UPV0 1460 aa24.58■■□□□ 1.52
EPB41L1-217ENST00000479336 FANCD2Q9BXW9 1451 aa24.53■■□□□ 1.52
EPB41L1-217ENST00000479336 PRDM2Q13029 1718 aa24.46■■□□□ 1.51
EPB41L1-217ENST00000479336 URB2Q14146 1524 aaKnown RBP24.45■■□□□ 1.51
EPB41L1-217ENST00000479336 CFTRP13569 1480 aa24.38■■□□□ 1.49
EPB41L1-217ENST00000479336 TOP2AP11388 1531 aaKnown RBP24.35■■□□□ 1.49
EPB41L1-217ENST00000479336 RIMBP3CA6NJZ7 1639 aa24.34■■□□□ 1.49
EPB41L1-217ENST00000479336 RIMBP3BA6NNM3 1639 aa24.34■■□□□ 1.49
EPB41L1-217ENST00000479336 RIMBP3Q9UFD9 1639 aa24.34■■□□□ 1.49
EPB41L1-217ENST00000479336 RSF1Q96T23 1441 aaPredicted RBP24.3■■□□□ 1.48
EPB41L1-217ENST00000479336 OSCARQ8IYS5 282 aa24.26■■□□□ 1.47
EPB41L1-217ENST00000479336 ZNF608Q9ULD9 1512 aaPredicted RBP24.24■■□□□ 1.47
EPB41L1-217ENST00000479336 CHD1O14646 1710 aa24.16■■□□□ 1.46
EPB41L1-217ENST00000479336 EIF4G3O43432 1585 aaKnown RBP24.13■■□□□ 1.45
EPB41L1-217ENST00000479336 ARHGEF11O15085 1522 aa24.1■■□□□ 1.45
EPB41L1-217ENST00000479336 CCDC88BA6NC98 1476 aa24.07■■□□□ 1.44
EPB41L1-217ENST00000479336 TOPBP1Q92547 1522 aa24.07■■□□□ 1.44
EPB41L1-217ENST00000479336 IFT140Q96RY7 1462 aa24.03■■□□□ 1.44
EPB41L1-217ENST00000479336 TARBP1Q13395 1621 aaKnown RBP23.97■■□□□ 1.43
EPB41L1-217ENST00000479336 DNMBPQ6XZF7 1577 aa23.95■■□□□ 1.42
EPB41L1-217ENST00000479336 AQRO60306 1485 aaKnown RBP eCLIP23.9■■□□□ 1.42
EPB41L1-217ENST00000479336 ARAP1Q96P48 1450 aa23.87■■□□□ 1.41
EPB41L1-217ENST00000479336 CYB5RLQ6IPT4 315 aa23.86■■□□□ 1.41
EPB41L1-217ENST00000479336 POLA1P09884 1462 aaPredicted RBP23.79■■□□□ 1.4
EPB41L1-217ENST00000479336 RAD54L2Q9Y4B4 1467 aa23.79■■□□□ 1.4
EPB41L1-217ENST00000479336 ABCC8Q09428 1581 aa23.76■■□□□ 1.39
EPB41L1-217ENST00000479336 FBLN2P98095 1184 aa23.75■■□□□ 1.39
EPB41L1-217ENST00000479336 TRHP20396 242 aaPredicted RBP23.7■■□□□ 1.38
EPB41L1-217ENST00000479336 TDRD9Q8NDG6 1382 aaKnown RBP23.66■■□□□ 1.38
EPB41L1-217ENST00000479336 SNAPC4Q5SXM2 1469 aa23.66■■□□□ 1.38
EPB41L1-217ENST00000479336 CLASP1Q7Z460 1538 aa23.65■■□□□ 1.38
EPB41L1-217ENST00000479336 WDR97A6NE52 1622 aa23.64■■□□□ 1.38
EPB41L1-217ENST00000479336 PBRM1Q86U86 1689 aa23.63■■□□□ 1.37
EPB41L1-217ENST00000479336 FGD5Q6ZNL6 1462 aa23.62■■□□□ 1.37
EPB41L1-217ENST00000479336 CUX1P39880 1505 aa23.59■■□□□ 1.37
EPB41L1-217ENST00000479336 SOGA1O94964 1423 aa23.58■■□□□ 1.36
EPB41L1-217ENST00000479336 SYNJ1O43426 1573 aa23.52■■□□□ 1.36
EPB41L1-217ENST00000479336 MAGI1Q96QZ7 1491 aaPredicted RBP23.44■■□□□ 1.34
EPB41L1-217ENST00000479336 ERCC6L2Q5T890 1561 aa23.43■■□□□ 1.34
EPB41L1-217ENST00000479336 GRIN2BQ13224 1484 aa23.42■■□□□ 1.34
EPB41L1-217ENST00000479336 CHMP7Q8WUX9 453 aaPredicted RBP23.4■■□□□ 1.34
EPB41L1-217ENST00000479336 SYNJ2O15056 1496 aa23.4■■□□□ 1.34
EPB41L1-217ENST00000479336 ABCA5Q8WWZ7 1642 aa23.39■■□□□ 1.33
EPB41L1-217ENST00000479336 GAPVD1Q14C86 1478 aa23.35■■□□□ 1.33
EPB41L1-217ENST00000479336 KIF13AQ9H1H9 1805 aa23.26■■□□□ 1.31
EPB41L1-217ENST00000479336 CEP170Q5SW79 1584 aa23.26■■□□□ 1.31
EPB41L1-217ENST00000479336 ABCA10Q8WWZ4 1543 aa23.23■■□□□ 1.31
EPB41L1-217ENST00000479336 ADAMTS12P58397 1594 aa23.23■■□□□ 1.31
EPB41L1-217ENST00000479336 AEBP2Q6ZN18 517 aaPredicted RBP23.21■■□□□ 1.31
EPB41L1-217ENST00000479336 GRIN2AQ12879 1464 aa23.18■■□□□ 1.3
EPB41L1-217ENST00000479336 SHROOM2Q13796 1616 aa23.15■■□□□ 1.3
EPB41L1-217ENST00000479336 BIVM-ERCC5R4GMW8 1640 aa23.14■■□□□ 1.29
EPB41L1-217ENST00000479336 NUP160Q12769 1436 aa23.08■■□□□ 1.28
EPB41L1-217ENST00000479336 TOP2BQ02880 1626 aa23.06■■□□□ 1.28
EPB41L1-217ENST00000479336 SUPT5HO00267 1087 aaKnown RBP23■■□□□ 1.27
EPB41L1-217ENST00000479336 WRNQ14191 1432 aaPredicted RBP eCLIP22.97■■□□□ 1.27
EPB41L1-217ENST00000479336 TSPOAP1O95153 1857 aa22.96■■□□□ 1.27
EPB41L1-217ENST00000479336 FHAD1B1AJZ9 1412 aa22.94■■□□□ 1.26
EPB41L1-217ENST00000479336 RUSC2Q8N2Y8 1516 aa22.93■■□□□ 1.26
EPB41L1-217ENST00000479336 ERICH3Q5RHP9 1530 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms