RNA–Protein interactions for RNA: ENST00000202028.9

EPB41L1-201, Transcript of erythrocyte membrane protein band 4.1 like 1, humanhuman

TSL 1 (best) BASIC

Gene EPB41L1, Length 3,514 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L1-201ENST00000202028 NISCHQ9Y2I1 1504 aa18.37■□□□□ 0.53
EPB41L1-201ENST00000202028 CCDC180Q9P1Z9 1646 aa16.34■□□□□ 0.21
EPB41L1-201ENST00000202028 ZCCHC6Q5VYS8 1495 aaKnown RBP15.49■□□□□ 0.07
EPB41L1-201ENST00000202028 DCAF1Q9Y4B6 1507 aa15.46■□□□□ 0.06
EPB41L1-201ENST00000202028 MYO15BQ96JP2 1530 aa15.35■□□□□ 0.05
EPB41L1-201ENST00000202028 NACADO15069 1562 aa15.08■□□□□ 0.01
EPB41L1-201ENST00000202028 ABCC9O60706 1549 aa14.91□□□□□ -0.02
EPB41L1-201ENST00000202028 RB1CC1Q8TDY2 1594 aa14.9□□□□□ -0.02
EPB41L1-201ENST00000202028 SHROOM4Q9ULL8 1493 aa14.8□□□□□ -0.04
EPB41L1-201ENST00000202028 UNC13AQ9UPW8 1703 aa14.71□□□□□ -0.06
EPB41L1-201ENST00000202028 SUPT5HO00267 1087 aaKnown RBP14.63□□□□□ -0.07
EPB41L1-201ENST00000202028 SCRIBQ14160 1630 aa14.6□□□□□ -0.07
EPB41L1-201ENST00000202028 DCAF8L2P0C7V8 631 aa14.49□□□□□ -0.09
EPB41L1-201ENST00000202028 BICRAQ9NZM4 1560 aa14.45□□□□□ -0.1
EPB41L1-201ENST00000202028 BAZ1AQ9NRL2 1556 aaPredicted RBP14.23□□□□□ -0.13
EPB41L1-201ENST00000202028 PEG3Q9GZU2 1588 aa14.19□□□□□ -0.14
EPB41L1-201ENST00000202028 SMARCA4P51532 1647 aa14.18□□□□□ -0.14
EPB41L1-201ENST00000202028 RSF1Q96T23 1441 aaPredicted RBP14.11□□□□□ -0.15
EPB41L1-201ENST00000202028 MROH2BQ7Z745 1585 aa14.08□□□□□ -0.15
EPB41L1-201ENST00000202028 CECR2Q9BXF3 1484 aa14.08□□□□□ -0.16
EPB41L1-201ENST00000202028 WIZO95785 1651 aa13.99□□□□□ -0.17
EPB41L1-201ENST00000202028 CHIC1Q5VXU3 224 aa13.98□□□□□ -0.17
EPB41L1-201ENST00000202028 TOP2AP11388 1531 aaKnown RBP13.97□□□□□ -0.17
EPB41L1-201ENST00000202028 PCGF6Q9BYE7 350 aa13.97□□□□□ -0.17
EPB41L1-201ENST00000202028 SMARCA2P51531 1590 aa13.96□□□□□ -0.17
EPB41L1-201ENST00000202028 EIF4G1Q04637 1599 aaKnown RBP13.96□□□□□ -0.18
EPB41L1-201ENST00000202028 HMGXB3Q12766 1538 aa13.93□□□□□ -0.18
EPB41L1-201ENST00000202028 ATAD2BQ9ULI0 1458 aa13.86□□□□□ -0.19
EPB41L1-201ENST00000202028 PABPN1Q86U42 306 aaKnown RBP eCLIP13.84□□□□□ -0.19
EPB41L1-201ENST00000202028 NCAPD3P42695 1498 aa13.83□□□□□ -0.2
EPB41L1-201ENST00000202028 HRCP23327 699 aa13.81□□□□□ -0.2
EPB41L1-201ENST00000202028 LOC105371045A0A1W2PR82 267 aa13.79□□□□□ -0.2
EPB41L1-201ENST00000202028 PPARGC1BQ86YN6 1023 aaKnown RBP13.74□□□□□ -0.21
EPB41L1-201ENST00000202028 BAZ1BQ9UIG0 1483 aaKnown RBP13.73□□□□□ -0.21
EPB41L1-201ENST00000202028 PRDM2Q13029 1718 aa13.73□□□□□ -0.21
EPB41L1-201ENST00000202028 CC2D2AQ9P2K1 1620 aa13.73□□□□□ -0.21
EPB41L1-201ENST00000202028 EHMT2Q96KQ7 1210 aa13.72□□□□□ -0.21
EPB41L1-201ENST00000202028 CCDC88BA6NC98 1476 aa13.66□□□□□ -0.22
EPB41L1-201ENST00000202028 FAM9AQ8IZU1 332 aaPredicted RBP13.62□□□□□ -0.23
EPB41L1-201ENST00000202028 CFTRP13569 1480 aa13.48□□□□□ -0.25
EPB41L1-201ENST00000202028 TRIM41Q8WV44 630 aa13.48□□□□□ -0.25
EPB41L1-201ENST00000202028 LAMC3Q9Y6N6 1575 aa13.44□□□□□ -0.26
EPB41L1-201ENST00000202028 TRIM26Q12899 539 aaPredicted RBP13.44□□□□□ -0.26
EPB41L1-201ENST00000202028 BIVM-ERCC5R4GMW8 1640 aa13.43□□□□□ -0.26
EPB41L1-201ENST00000202028 TOP2BQ02880 1626 aa13.36□□□□□ -0.27
EPB41L1-201ENST00000202028 CADPSQ9ULU8 1353 aa13.34□□□□□ -0.27
EPB41L1-201ENST00000202028 SYNJ1O43426 1573 aa13.28□□□□□ -0.28
EPB41L1-201ENST00000202028 TTBK1Q5TCY1 1321 aaPredicted RBP13.27□□□□□ -0.28
EPB41L1-201ENST00000202028 ABCC8Q09428 1581 aa13.27□□□□□ -0.29
EPB41L1-201ENST00000202028 WRNQ14191 1432 aaPredicted RBP eCLIP13.26□□□□□ -0.29
EPB41L1-201ENST00000202028 DNMBPQ6XZF7 1577 aa13.22□□□□□ -0.29
EPB41L1-201ENST00000202028 EEA1Q15075 1411 aa13.22□□□□□ -0.29
EPB41L1-201ENST00000202028 CUX1P39880 1505 aa13.21□□□□□ -0.29
EPB41L1-201ENST00000202028 KIF21AQ7Z4S6 1674 aa13.2□□□□□ -0.3
EPB41L1-201ENST00000202028 FANCD2Q9BXW9 1451 aa13.18□□□□□ -0.3
EPB41L1-201ENST00000202028 WDR97A6NE52 1622 aa13.18□□□□□ -0.3
EPB41L1-201ENST00000202028 ZEB1P37275 1124 aaPredicted RBP13.17□□□□□ -0.3
EPB41L1-201ENST00000202028 PDS5BQ9NTI5 1447 aa13.16□□□□□ -0.3
EPB41L1-201ENST00000202028 CEP164Q9UPV0 1460 aa13.14□□□□□ -0.31
EPB41L1-201ENST00000202028 NESP48681 1621 aa13.11□□□□□ -0.31
EPB41L1-201ENST00000202028 KIF21BO75037 1637 aa13.1□□□□□ -0.31
EPB41L1-201ENST00000202028 TOPBP1Q92547 1522 aa13.09□□□□□ -0.31
EPB41L1-201ENST00000202028 WDR62O43379 1518 aa13.09□□□□□ -0.31
EPB41L1-201ENST00000202028 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.08□□□□□ -0.32
EPB41L1-201ENST00000202028 CCER1Q8TC90 406 aaPredicted RBP13.08□□□□□ -0.32
EPB41L1-201ENST00000202028 THOC2Q8NI27 1593 aaKnown RBP13.08□□□□□ -0.32
EPB41L1-201ENST00000202028 DNAJC5BQ9UF47 199 aa13.07□□□□□ -0.32
EPB41L1-201ENST00000202028 URB2Q14146 1524 aaKnown RBP13.06□□□□□ -0.32
EPB41L1-201ENST00000202028 MRC2Q9UBG0 1479 aa13.04□□□□□ -0.32
EPB41L1-201ENST00000202028 ABCA10Q8WWZ4 1543 aa13.04□□□□□ -0.32
EPB41L1-201ENST00000202028 ERICH3Q5RHP9 1530 aa13.02□□□□□ -0.32
EPB41L1-201ENST00000202028 TARBP1Q13395 1621 aaKnown RBP13.02□□□□□ -0.32
EPB41L1-201ENST00000202028 FGD5Q6ZNL6 1462 aa13.02□□□□□ -0.32
EPB41L1-201ENST00000202028 ABCA5Q8WWZ7 1642 aa13.02□□□□□ -0.33
EPB41L1-201ENST00000202028 POLA1P09884 1462 aaPredicted RBP12.99□□□□□ -0.33
EPB41L1-201ENST00000202028 CUL7Q14999 1698 aa12.98□□□□□ -0.33
EPB41L1-201ENST00000202028 SOGA1O94964 1423 aa12.95□□□□□ -0.34
EPB41L1-201ENST00000202028 KIF27Q86VH2 1401 aa12.94□□□□□ -0.34
EPB41L1-201ENST00000202028 PRXQ9BXM0 1461 aa12.94□□□□□ -0.34
EPB41L1-201ENST00000202028 UBTFP17480 764 aaKnown RBP12.93□□□□□ -0.34
EPB41L1-201ENST00000202028 PBRM1Q86U86 1689 aa12.92□□□□□ -0.34
EPB41L1-201ENST00000202028 RUSC2Q8N2Y8 1516 aa12.9□□□□□ -0.34
EPB41L1-201ENST00000202028 GOLGA3Q08378 1498 aa12.9□□□□□ -0.34
EPB41L1-201ENST00000202028 RANGAP1P46060 587 aaPredicted RBP12.9□□□□□ -0.34
EPB41L1-201ENST00000202028 IFT140Q96RY7 1462 aa12.89□□□□□ -0.35
EPB41L1-201ENST00000202028 SCAF1Q9H7N4 1312 aaKnown RBP12.89□□□□□ -0.35
EPB41L1-201ENST00000202028 CUX2O14529 1486 aa12.89□□□□□ -0.35
EPB41L1-201ENST00000202028 TNIKQ9UKE5 1360 aa12.84□□□□□ -0.35
EPB41L1-201ENST00000202028 CSRNP3Q8WYN3 585 aa12.84□□□□□ -0.35
EPB41L1-201ENST00000202028 CTTNBP2Q8WZ74 1663 aa12.83□□□□□ -0.36
EPB41L1-201ENST00000202028 ERCC6Q03468 1493 aa12.81□□□□□ -0.36
EPB41L1-201ENST00000202028 RAD54L2Q9Y4B4 1467 aa12.81□□□□□ -0.36
EPB41L1-201ENST00000202028 ADAMTS12P58397 1594 aa12.8□□□□□ -0.36
EPB41L1-201ENST00000202028 DIEXFQ68CQ4 756 aaKnown RBP12.8□□□□□ -0.36
EPB41L1-201ENST00000202028 EIF4G3O43432 1585 aaKnown RBP12.8□□□□□ -0.36
EPB41L1-201ENST00000202028 IGF1RP08069 1367 aa12.79□□□□□ -0.36
EPB41L1-201ENST00000202028 YTHDC1Q96MU7 727 aaKnown RBP12.78□□□□□ -0.36
EPB41L1-201ENST00000202028 GAPVD1Q14C86 1478 aa12.78□□□□□ -0.36
EPB41L1-201ENST00000202028 RAPGEF2Q9Y4G8 1499 aa12.78□□□□□ -0.36
EPB41L1-201ENST00000202028 HNRNPUL2Q1KMD3 747 aaKnown RBP12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms