Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 IDI1-205ENST00000491735 1066 ntTSL 1 (best)18.71■□□□□ 0.592e-6■■□□□ 12.6
NCBP2P52298 CPSF7-209ENST00000463244 545 ntTSL 418.56■□□□□ 0.562e-6■■□□□ 12.6
NCBP2P52298 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.5■□□□□ 0.552e-6■■□□□ 12.6
NCBP2P52298 FAM207A-203ENST00000458015 643 ntTSL 518.48■□□□□ 0.552e-6■■□□□ 12.6
NCBP2P52298 SLC11A2-221ENST00000550329 622 ntTSL 218.45■□□□□ 0.542e-6■■□□□ 12.6
NCBP2P52298 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.532e-6■■□□□ 12.6
NCBP2P52298 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.28■□□□□ 0.522e-6■■□□□ 12.6
NCBP2P52298 C6orf136-204ENST00000446773 1496 ntTSL 1 (best)18.16■□□□□ 0.52e-6■■□□□ 12.6
NCBP2P52298 UBE2D3-220ENST00000505307 743 ntTSL 518.11■□□□□ 0.493e-11■■□□□ 12.6
NCBP2P52298 SLC11A2-222ENST00000550714 587 ntTSL 418.07■□□□□ 0.482e-6■■□□□ 12.6
NCBP2P52298 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.472e-6■■□□□ 12.6
NCBP2P52298 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.96■□□□□ 0.472e-6■■□□□ 12.6
NCBP2P52298 CROCCP2-206ENST00000639594 2175 ntTSL 1 (best)17.88■□□□□ 0.452e-6■■□□□ 12.6
NCBP2P52298 ESPN-213ENST00000632803 455 ntTSL 317.85■□□□□ 0.452e-6■■□□□ 12.6
NCBP2P52298 SLC11A2-219ENST00000549625 585 ntTSL 517.85■□□□□ 0.452e-6■■□□□ 12.6
NCBP2P52298 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.74■□□□□ 0.432e-6■■□□□ 12.6
NCBP2P52298 UBE2D3-215ENST00000503418 662 ntTSL 417.72■□□□□ 0.433e-11■■□□□ 12.6
NCBP2P52298 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.69■□□□□ 0.422e-6■■□□□ 12.6
NCBP2P52298 ESPN-210ENST00000478323 270 ntTSL 517.61■□□□□ 0.412e-6■■□□□ 12.6
NCBP2P52298 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.61■□□□□ 0.412e-6■■□□□ 12.6
NCBP2P52298 ESPN-212ENST00000632593 506 ntTSL 217.58■□□□□ 0.42e-6■■□□□ 12.6
NCBP2P52298 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.42e-6■■□□□ 12.6
NCBP2P52298 CYBA-203ENST00000562209 624 ntTSL 517.54■□□□□ 0.41e-6■■□□□ 12.6
NCBP2P52298 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.48■□□□□ 0.392e-6■■□□□ 12.6
NCBP2P52298 CPSF7-204ENST00000413232 727 ntTSL 317.37■□□□□ 0.372e-6■■□□□ 12.6
NCBP2P52298 SPON2-212ENST00000509233 549 ntTSL 417.37■□□□□ 0.372e-6■■□□□ 12.6
NCBP2P52298 PKMYT1-220ENST00000576268 1091 ntTSL 317■□□□□ 0.312e-6■■□□□ 12.6
NCBP2P52298 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.292e-6■■□□□ 12.6
NCBP2P52298 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.292e-6■■□□□ 12.6
NCBP2P52298 SLC11A2-211ENST00000547579 581 ntTSL 516.7■□□□□ 0.262e-6■■□□□ 12.6
NCBP2P52298 EPM2A-215ENST00000639049 3335 ntTSL 1 (best)16.67■□□□□ 0.262e-6■■□□□ 12.6
NCBP2P52298 LRRC41-205ENST00000498402 2068 ntTSL 216.59■□□□□ 0.252e-6■■□□□ 12.6
NCBP2P52298 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.232e-6■■□□□ 12.6
NCBP2P52298 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.192e-6■■□□□ 12.6
NCBP2P52298 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.192e-6■■□□□ 12.6
NCBP2P52298 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.172e-6■■□□□ 12.6
NCBP2P52298 SPON2-202ENST00000400762 1736 ntTSL 1 (best)16.13■□□□□ 0.172e-6■■□□□ 12.6
NCBP2P52298 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.11■□□□□ 0.171e-6■■□□□ 12.6
NCBP2P52298 DPCD-204ENST00000470165 761 ntTSL 316.09■□□□□ 0.172e-6■■□□□ 12.6
NCBP2P52298 GK5-206ENST00000466685 801 ntTSL 315.86■□□□□ 0.132e-6■■□□□ 12.6
NCBP2P52298 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.85■□□□□ 0.132e-6■■□□□ 12.6
NCBP2P52298 PKMYT1-214ENST00000574415 1006 ntTSL 515.78■□□□□ 0.122e-6■■□□□ 12.6
NCBP2P52298 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.112e-6■■□□□ 12.6
NCBP2P52298 SPON2-215ENST00000511672 557 ntTSL 415.71■□□□□ 0.112e-6■■□□□ 12.6
NCBP2P52298 ESPN-207ENST00000475228 813 ntTSL 515.64■□□□□ 0.092e-6■■□□□ 12.6
NCBP2P52298 SERINC2-204ENST00000491976 2807 ntTSL 215.63■□□□□ 0.092e-6■■□□□ 12.6
NCBP2P52298 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.58■□□□□ 0.082e-6■■□□□ 12.6
NCBP2P52298 TCF20-204ENST00000515426 633 ntTSL 515.55■□□□□ 0.082e-6■■□□□ 12.6
NCBP2P52298 PKMYT1-218ENST00000575632 979 ntTSL 215.51■□□□□ 0.072e-6■■□□□ 12.6
NCBP2P52298 PAAF1-203ENST00000381783 2020 ntTSL 215.4■□□□□ 0.062e-6■■□□□ 12.6
NCBP2P52298 UBE2D3-213ENST00000502690 599 ntTSL 415.37■□□□□ 0.053e-11■■□□□ 12.6
NCBP2P52298 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.37■□□□□ 0.052e-6■■□□□ 12.6
NCBP2P52298 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.29■□□□□ 0.042e-6■■□□□ 12.6
NCBP2P52298 C6orf136-206ENST00000463794 445 ntTSL 315.25■□□□□ 0.032e-6■■□□□ 12.6
NCBP2P52298 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.022e-6■■□□□ 12.6
NCBP2P52298 SERINC2-203ENST00000487207 735 ntTSL 215.13■□□□□ 0.012e-6■■□□□ 12.6
NCBP2P52298 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.97□□□□□ -0.012e-6■■□□□ 12.6
NCBP2P52298 C6orf136-210ENST00000484551 613 ntTSL 314.9□□□□□ -0.022e-6■■□□□ 12.6
NCBP2P52298 CPSF7-225ENST00000545934 565 ntTSL 414.88□□□□□ -0.032e-6■■□□□ 12.6
NCBP2P52298 C6orf136-213ENST00000493705 715 ntTSL 514.8□□□□□ -0.042e-6■■□□□ 12.6
NCBP2P52298 CYBA-202ENST00000561972 464 ntTSL 314.79□□□□□ -0.041e-6■■□□□ 12.6
NCBP2P52298 PAAF1-213ENST00000543814 882 ntTSL 514.75□□□□□ -0.052e-6■■□□□ 12.6
NCBP2P52298 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.082e-6■■□□□ 12.6
NCBP2P52298 PKMYT1-207ENST00000572059 880 ntTSL 514.52□□□□□ -0.092e-6■■□□□ 12.6
NCBP2P52298 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.093e-11■■□□□ 12.6
NCBP2P52298 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.46□□□□□ -0.092e-6■■□□□ 12.6
NCBP2P52298 C6orf136-212ENST00000488383 1337 ntTSL 514.46□□□□□ -0.092e-6■■□□□ 12.6
NCBP2P52298 FHOD1-207ENST00000567752 4321 ntTSL 214.35□□□□□ -0.112e-6■■□□□ 12.6
NCBP2P52298 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.122e-6■■□□□ 12.6
NCBP2P52298 CYBA-204ENST00000563526 1052 ntTSL 214.22□□□□□ -0.131e-6■■□□□ 12.6
NCBP2P52298 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.16□□□□□ -0.141e-8■■□□□ 12.6
NCBP2P52298 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.09□□□□□ -0.152e-6■■□□□ 12.6
NCBP2P52298 CHFR-214ENST00000536932 584 ntTSL 414.07□□□□□ -0.162e-6■■□□□ 12.6
NCBP2P52298 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC13.97□□□□□ -0.172e-6■■□□□ 12.6
NCBP2P52298 SPON2-216ENST00000511679 556 ntTSL 513.96□□□□□ -0.172e-6■■□□□ 12.6
NCBP2P52298 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.182e-6■■□□□ 12.6
NCBP2P52298 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.84□□□□□ -0.192e-6■■□□□ 12.6
NCBP2P52298 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC13.7□□□□□ -0.221e-6■■□□□ 12.6
NCBP2P52298 GK5-208ENST00000480757 4479 ntTSL 1 (best)13.66□□□□□ -0.222e-6■■□□□ 12.6
NCBP2P52298 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.232e-6■■□□□ 12.6
NCBP2P52298 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.62□□□□□ -0.232e-6■■□□□ 12.6
NCBP2P52298 UBE2D3-228ENST00000508974 568 ntTSL 413.55□□□□□ -0.243e-11■■□□□ 12.6
NCBP2P52298 PAAF1-211ENST00000542293 667 ntTSL 313.54□□□□□ -0.242e-6■■□□□ 12.6
NCBP2P52298 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.262e-6■■□□□ 12.6
NCBP2P52298 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC13.37□□□□□ -0.272e-6■■□□□ 12.6
NCBP2P52298 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.292e-6■■□□□ 12.6
NCBP2P52298 GK5-212ENST00000492097 3049 ntTSL 1 (best)13.21□□□□□ -0.32e-6■■□□□ 12.6
NCBP2P52298 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC13.14□□□□□ -0.312e-6■■□□□ 12.6
NCBP2P52298 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.313e-11■■□□□ 12.6
NCBP2P52298 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.312e-6■■□□□ 12.6
NCBP2P52298 CYBA-206ENST00000566229 405 ntTSL 313.07□□□□□ -0.322e-6■■□□□ 12.6
NCBP2P52298 CYBA-207ENST00000566534 1006 ntTSL 513.07□□□□□ -0.321e-6■■□□□ 12.6
NCBP2P52298 PTPRF-202ENST00000372405 1962 ntTSL 1 (best)13.01□□□□□ -0.332e-6■■□□□ 12.6
NCBP2P52298 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC12.91□□□□□ -0.342e-6■■□□□ 12.6
NCBP2P52298 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.352e-6■■□□□ 12.6
NCBP2P52298 SPON2-205ENST00000502657 559 ntTSL 412.87□□□□□ -0.352e-6■■□□□ 12.6
NCBP2P52298 PAAF1-204ENST00000504441 975 ntTSL 512.57□□□□□ -0.42e-6■■□□□ 12.6
NCBP2P52298 CHFR-221ENST00000542714 542 ntTSL 412.49□□□□□ -0.412e-6■■□□□ 12.6
NCBP2P52298 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.432e-6■■□□□ 12.6
NCBP2P52298 CPSF7-223ENST00000544669 1800 ntTSL 512.32□□□□□ -0.442e-6■■□□□ 12.6
Retrieved 100 of 18,329 protein–RNA pairs in 185.5 ms