RNA–Protein interactions for RNA: ENST00000550714.5

SLC11A2-222, Transcript of solute carrier family 11 member 2, humanhuman

TSL 4

Gene SLC11A2, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC11A2-222ENST00000550714 NISCHQ9Y2I1 1504 aa47.47■■■■■ 5.19
SLC11A2-222ENST00000550714 CCDC180Q9P1Z9 1646 aa42.24■■■■■ 4.35
SLC11A2-222ENST00000550714 ABCC9O60706 1549 aa41.27■■■■■ 4.2
SLC11A2-222ENST00000550714 RB1CC1Q8TDY2 1594 aa39.74■■■■□ 3.95
SLC11A2-222ENST00000550714 NACADO15069 1562 aa39.7■■■■□ 3.95
SLC11A2-222ENST00000550714 DCAF8L2P0C7V8 631 aa39.67■■■■□ 3.94
SLC11A2-222ENST00000550714 ZCCHC6Q5VYS8 1495 aaKnown RBP39.54■■■■□ 3.92
SLC11A2-222ENST00000550714 MYO15BQ96JP2 1530 aa39.45■■■■□ 3.91
SLC11A2-222ENST00000550714 DCAF1Q9Y4B6 1507 aa39.3■■■■□ 3.88
SLC11A2-222ENST00000550714 UNC13AQ9UPW8 1703 aa38.87■■■■□ 3.81
SLC11A2-222ENST00000550714 PABPN1Q86U42 306 aaKnown RBP eCLIP38.55■■■■□ 3.76
SLC11A2-222ENST00000550714 BICRAQ9NZM4 1560 aa38.51■■■■□ 3.76
SLC11A2-222ENST00000550714 SCRIBQ14160 1630 aa38.5■■■■□ 3.75
SLC11A2-222ENST00000550714 SHROOM4Q9ULL8 1493 aa38.12■■■■□ 3.69
SLC11A2-222ENST00000550714 DNAJC5BQ9UF47 199 aa37.84■■■■□ 3.65
SLC11A2-222ENST00000550714 EIF4G1Q04637 1599 aaKnown RBP37.51■■■■□ 3.59
SLC11A2-222ENST00000550714 CC2D2AQ9P2K1 1620 aa37.36■■■■□ 3.57
SLC11A2-222ENST00000550714 CECR2Q9BXF3 1484 aa37.08■■■■□ 3.53
SLC11A2-222ENST00000550714 SMARCA4P51532 1647 aa36.85■■■■□ 3.49
SLC11A2-222ENST00000550714 BAZ1AQ9NRL2 1556 aaPredicted RBP36.81■■■■□ 3.48
SLC11A2-222ENST00000550714 ATAD2BQ9ULI0 1458 aa36.62■■■■□ 3.45
SLC11A2-222ENST00000550714 NCAPD3P42695 1498 aa36.61■■■■□ 3.45
SLC11A2-222ENST00000550714 SMARCA2P51531 1590 aa36.61■■■■□ 3.45
SLC11A2-222ENST00000550714 MROH2BQ7Z745 1585 aa36.57■■■■□ 3.45
SLC11A2-222ENST00000550714 PEG3Q9GZU2 1588 aa36.49■■■■□ 3.43
SLC11A2-222ENST00000550714 HMGXB3Q12766 1538 aa36.44■■■■□ 3.42
SLC11A2-222ENST00000550714 BAZ1BQ9UIG0 1483 aaKnown RBP36.34■■■■□ 3.41
SLC11A2-222ENST00000550714 WIZO95785 1651 aa36.21■■■■□ 3.39
SLC11A2-222ENST00000550714 RSF1Q96T23 1441 aaPredicted RBP36.16■■■■□ 3.38
SLC11A2-222ENST00000550714 TOP2AP11388 1531 aaKnown RBP35.82■■■■□ 3.32
SLC11A2-222ENST00000550714 NESP48681 1621 aa35.71■■■■□ 3.31
SLC11A2-222ENST00000550714 LAMC3Q9Y6N6 1575 aa35.67■■■■□ 3.3
SLC11A2-222ENST00000550714 ERCC6Q03468 1493 aa35.58■■■■□ 3.29
SLC11A2-222ENST00000550714 CADPSQ9ULU8 1353 aa35.54■■■■□ 3.28
SLC11A2-222ENST00000550714 PDS5BQ9NTI5 1447 aa35.41■■■■□ 3.26
SLC11A2-222ENST00000550714 CCDC88BA6NC98 1476 aa35.39■■■■□ 3.26
SLC11A2-222ENST00000550714 CFTRP13569 1480 aa35.34■■■■□ 3.25
SLC11A2-222ENST00000550714 KIF21AQ7Z4S6 1674 aa35.33■■■■□ 3.25
SLC11A2-222ENST00000550714 SUPT5HO00267 1087 aaKnown RBP35.27■■■■□ 3.24
SLC11A2-222ENST00000550714 CUX2O14529 1486 aa35.21■■■■□ 3.23
SLC11A2-222ENST00000550714 THOC2Q8NI27 1593 aaKnown RBP35.19■■■■□ 3.22
SLC11A2-222ENST00000550714 PRDM2Q13029 1718 aa35.15■■■■□ 3.22
SLC11A2-222ENST00000550714 FANCD2Q9BXW9 1451 aa35.14■■■■□ 3.22
SLC11A2-222ENST00000550714 CEP164Q9UPV0 1460 aa35.09■■■■□ 3.21
SLC11A2-222ENST00000550714 MRC2Q9UBG0 1479 aa35.03■■■■□ 3.2
SLC11A2-222ENST00000550714 WDR62O43379 1518 aa34.92■■■■□ 3.18
SLC11A2-222ENST00000550714 URB2Q14146 1524 aaKnown RBP34.77■■■■□ 3.16
SLC11A2-222ENST00000550714 ABCC8Q09428 1581 aa34.61■■■■□ 3.13
SLC11A2-222ENST00000550714 TOPBP1Q92547 1522 aa34.58■■■■□ 3.13
SLC11A2-222ENST00000550714 DNMBPQ6XZF7 1577 aa34.55■■■■□ 3.12
SLC11A2-222ENST00000550714 IFT140Q96RY7 1462 aa34.36■■■■□ 3.09
SLC11A2-222ENST00000550714 CUX1P39880 1505 aa34.31■■■■□ 3.08
SLC11A2-222ENST00000550714 POLA1P09884 1462 aaPredicted RBP34.28■■■■□ 3.08
SLC11A2-222ENST00000550714 TARBP1Q13395 1621 aaKnown RBP34.22■■■■□ 3.07
SLC11A2-222ENST00000550714 FGD5Q6ZNL6 1462 aa34.2■■■■□ 3.07
SLC11A2-222ENST00000550714 ZNF608Q9ULD9 1512 aaPredicted RBP34.18■■■■□ 3.06
SLC11A2-222ENST00000550714 SOGA1O94964 1423 aa34.15■■■■□ 3.06
SLC11A2-222ENST00000550714 RAD54L2Q9Y4B4 1467 aa34.13■■■■□ 3.05
SLC11A2-222ENST00000550714 WRNQ14191 1432 aaPredicted RBP eCLIP34.11■■■■□ 3.05
SLC11A2-222ENST00000550714 DNAJC5Q9H3Z4 198 aa34.09■■■■□ 3.05
SLC11A2-222ENST00000550714 EIF4G3O43432 1585 aaKnown RBP34.07■■■■□ 3.05
SLC11A2-222ENST00000550714 TOP2BQ02880 1626 aa34.05■■■■□ 3.04
SLC11A2-222ENST00000550714 BIVM-ERCC5R4GMW8 1640 aa34.05■■■■□ 3.04
SLC11A2-222ENST00000550714 SYNJ1O43426 1573 aa34.02■■■■□ 3.04
SLC11A2-222ENST00000550714 AQRO60306 1485 aaKnown RBP eCLIP34.01■■■■□ 3.031e-7■■■■□ 20.4
SLC11A2-222ENST00000550714 WDR97A6NE52 1622 aa33.96■■■■□ 3.03
SLC11A2-222ENST00000550714 TDRD9Q8NDG6 1382 aaKnown RBP33.94■■■■□ 3.02
SLC11A2-222ENST00000550714 ABCA10Q8WWZ4 1543 aa33.88■■■■□ 3.01
SLC11A2-222ENST00000550714 GAPVD1Q14C86 1478 aa33.76■■■□□ 2.99
SLC11A2-222ENST00000550714 ABCA5Q8WWZ7 1642 aa33.75■■■□□ 2.99
SLC11A2-222ENST00000550714 OSCARQ8IYS5 282 aa33.75■■■□□ 2.99
SLC11A2-222ENST00000550714 GRIN2BQ13224 1484 aa33.75■■■□□ 2.99
SLC11A2-222ENST00000550714 PBRM1Q86U86 1689 aa33.72■■■□□ 2.99
SLC11A2-222ENST00000550714 SNAPC4Q5SXM2 1469 aa33.69■■■□□ 2.98
SLC11A2-222ENST00000550714 CHD1O14646 1710 aa33.67■■■□□ 2.98
SLC11A2-222ENST00000550714 MAGI1Q96QZ7 1491 aaPredicted RBP33.66■■■□□ 2.98
SLC11A2-222ENST00000550714 FBLN2P98095 1184 aa33.6■■■□□ 2.97
SLC11A2-222ENST00000550714 SYNJ2O15056 1496 aa33.53■■■□□ 2.96
SLC11A2-222ENST00000550714 CHMP7Q8WUX9 453 aaPredicted RBP33.52■■■□□ 2.96
SLC11A2-222ENST00000550714 ERICH3Q5RHP9 1530 aa33.48■■■□□ 2.95
SLC11A2-222ENST00000550714 ADAMTS12P58397 1594 aa33.42■■■□□ 2.94
SLC11A2-222ENST00000550714 KIF27Q86VH2 1401 aa33.4■■■□□ 2.94
SLC11A2-222ENST00000550714 FHAD1B1AJZ9 1412 aa33.36■■■□□ 2.93
SLC11A2-222ENST00000550714 TRIM41Q8WV44 630 aa33.33■■■□□ 2.93
SLC11A2-222ENST00000550714 GRIN2AQ12879 1464 aa33.31■■■□□ 2.92
SLC11A2-222ENST00000550714 CLASP1Q7Z460 1538 aa33.27■■■□□ 2.92
SLC11A2-222ENST00000550714 IGF1RP08069 1367 aa33.25■■■□□ 2.91
SLC11A2-222ENST00000550714 RIMBP3CA6NJZ7 1639 aa33.2■■■□□ 2.91
SLC11A2-222ENST00000550714 RIMBP3BA6NNM3 1639 aa33.2■■■□□ 2.91
SLC11A2-222ENST00000550714 RIMBP3Q9UFD9 1639 aa33.2■■■□□ 2.91
SLC11A2-222ENST00000550714 CUL7Q14999 1698 aa33.2■■■□□ 2.91
SLC11A2-222ENST00000550714 ARHGEF11O15085 1522 aa33.19■■■□□ 2.9
SLC11A2-222ENST00000550714 NUP160Q12769 1436 aa33.15■■■□□ 2.9
SLC11A2-222ENST00000550714 CEP170Q5SW79 1584 aa33.14■■■□□ 2.9
SLC11A2-222ENST00000550714 RUSC2Q8N2Y8 1516 aa33.09■■■□□ 2.89
SLC11A2-222ENST00000550714 CARMIL1Q5VZK9 1371 aa33.06■■■□□ 2.88
SLC11A2-222ENST00000550714 SHROOM2Q13796 1616 aa32.93■■■□□ 2.86
SLC11A2-222ENST00000550714 CHIC1Q5VXU3 224 aa32.92■■■□□ 2.86
SLC11A2-222ENST00000550714 ARAP1Q96P48 1450 aa32.92■■■□□ 2.86
SLC11A2-222ENST00000550714 CYB5RLQ6IPT4 315 aa32.88■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms