RNA–Protein interactions for RNA: ENST00000504441.6

PAAF1-204, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 5

Gene PAAF1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-204ENST00000504441 NISCHQ9Y2I1 1504 aa35.66■■■■□ 3.3
PAAF1-204ENST00000504441 ABCC9O60706 1549 aa32.55■■■□□ 2.8
PAAF1-204ENST00000504441 CCDC180Q9P1Z9 1646 aa32.09■■■□□ 2.73
PAAF1-204ENST00000504441 DNAJC5BQ9UF47 199 aa30.81■■■□□ 2.52
PAAF1-204ENST00000504441 RB1CC1Q8TDY2 1594 aa30.75■■■□□ 2.51
PAAF1-204ENST00000504441 DCAF8L2P0C7V8 631 aa30.45■■■□□ 2.47
PAAF1-204ENST00000504441 NACADO15069 1562 aa30.43■■■□□ 2.46
PAAF1-204ENST00000504441 PABPN1Q86U42 306 aaKnown RBP eCLIP30.3■■■□□ 2.44
PAAF1-204ENST00000504441 UNC13AQ9UPW8 1703 aa30.04■■■□□ 2.4
PAAF1-204ENST00000504441 BICRAQ9NZM4 1560 aa29.86■■■□□ 2.37
PAAF1-204ENST00000504441 MYO15BQ96JP2 1530 aa29.84■■■□□ 2.37
PAAF1-204ENST00000504441 ZCCHC6Q5VYS8 1495 aaKnown RBP29.48■■■□□ 2.31
PAAF1-204ENST00000504441 DCAF1Q9Y4B6 1507 aa29.35■■■□□ 2.29
PAAF1-204ENST00000504441 SCRIBQ14160 1630 aa29.34■■■□□ 2.29
PAAF1-204ENST00000504441 SHROOM4Q9ULL8 1493 aa29.34■■■□□ 2.29
PAAF1-204ENST00000504441 CC2D2AQ9P2K1 1620 aa29.33■■■□□ 2.29
PAAF1-204ENST00000504441 CECR2Q9BXF3 1484 aa29.32■■■□□ 2.28
PAAF1-204ENST00000504441 EIF4G1Q04637 1599 aaKnown RBP29.18■■■□□ 2.26
PAAF1-204ENST00000504441 DNAJC5Q9H3Z4 198 aa28.49■■■□□ 2.15
PAAF1-204ENST00000504441 ERCC6Q03468 1493 aa28.13■■■□□ 2.09
PAAF1-204ENST00000504441 NCAPD3P42695 1498 aa28.1■■■□□ 2.09
PAAF1-204ENST00000504441 CUX2O14529 1486 aa28.08■■■□□ 2.09
PAAF1-204ENST00000504441 ATAD2BQ9ULI0 1458 aa28.01■■■□□ 2.07
PAAF1-204ENST00000504441 SMARCA2P51531 1590 aa27.9■■■□□ 2.06
PAAF1-204ENST00000504441 SMARCA4P51532 1647 aa27.89■■■□□ 2.06
PAAF1-204ENST00000504441 NESP48681 1621 aa27.86■■■□□ 2.05
PAAF1-204ENST00000504441 HMGXB3Q12766 1538 aa27.86■■■□□ 2.05
PAAF1-204ENST00000504441 BAZ1BQ9UIG0 1483 aaKnown RBP27.76■■■□□ 2.03
PAAF1-204ENST00000504441 BAZ1AQ9NRL2 1556 aaPredicted RBP27.7■■■□□ 2.03
PAAF1-204ENST00000504441 THOC2Q8NI27 1593 aaKnown RBP27.56■■■□□ 2
PAAF1-204ENST00000504441 PEG3Q9GZU2 1588 aa27.56■■■□□ 2
PAAF1-204ENST00000504441 LAMC3Q9Y6N6 1575 aa27.53■■■□□ 2
PAAF1-204ENST00000504441 MROH2BQ7Z745 1585 aa27.51■■□□□ 1.99
PAAF1-204ENST00000504441 KIF21AQ7Z4S6 1674 aa27.45■■□□□ 1.98
PAAF1-204ENST00000504441 PDS5BQ9NTI5 1447 aa27.41■■□□□ 1.98
PAAF1-204ENST00000504441 CADPSQ9ULU8 1353 aa27.27■■□□□ 1.96
PAAF1-204ENST00000504441 TRIM41Q8WV44 630 aa27.24■■□□□ 1.95
PAAF1-204ENST00000504441 MRC2Q9UBG0 1479 aa27.2■■□□□ 1.95
PAAF1-204ENST00000504441 WIZO95785 1651 aa27.17■■□□□ 1.94
PAAF1-204ENST00000504441 WDR62O43379 1518 aa27.11■■□□□ 1.93
PAAF1-204ENST00000504441 CEP164Q9UPV0 1460 aa27.05■■□□□ 1.92
PAAF1-204ENST00000504441 FANCD2Q9BXW9 1451 aa26.99■■□□□ 1.91
PAAF1-204ENST00000504441 CFTRP13569 1480 aa26.87■■□□□ 1.89
PAAF1-204ENST00000504441 OSCARQ8IYS5 282 aa26.83■■□□□ 1.89
PAAF1-204ENST00000504441 RSF1Q96T23 1441 aaPredicted RBP26.82■■□□□ 1.88
PAAF1-204ENST00000504441 URB2Q14146 1524 aaKnown RBP26.78■■□□□ 1.88
PAAF1-204ENST00000504441 TOP2AP11388 1531 aaKnown RBP26.77■■□□□ 1.88
PAAF1-204ENST00000504441 PRDM2Q13029 1718 aa26.53■■□□□ 1.84
PAAF1-204ENST00000504441 ZNF608Q9ULD9 1512 aaPredicted RBP26.53■■□□□ 1.84
PAAF1-204ENST00000504441 CCDC88BA6NC98 1476 aa26.5■■□□□ 1.83
PAAF1-204ENST00000504441 IFT140Q96RY7 1462 aa26.49■■□□□ 1.83
PAAF1-204ENST00000504441 RIMBP3CA6NJZ7 1639 aa26.49■■□□□ 1.83
PAAF1-204ENST00000504441 RIMBP3BA6NNM3 1639 aa26.49■■□□□ 1.83
PAAF1-204ENST00000504441 RIMBP3Q9UFD9 1639 aa26.49■■□□□ 1.83
PAAF1-204ENST00000504441 TOPBP1Q92547 1522 aa26.43■■□□□ 1.82
PAAF1-204ENST00000504441 ARHGEF11O15085 1522 aa26.37■■□□□ 1.81
PAAF1-204ENST00000504441 EIF4G3O43432 1585 aaKnown RBP26.34■■□□□ 1.81
PAAF1-204ENST00000504441 ABCC8Q09428 1581 aa26.31■■□□□ 1.8
PAAF1-204ENST00000504441 DNMBPQ6XZF7 1577 aa26.29■■□□□ 1.8
PAAF1-204ENST00000504441 CYB5RLQ6IPT4 315 aa26.28■■□□□ 1.8
PAAF1-204ENST00000504441 AQRO60306 1485 aaKnown RBP eCLIP26.26■■□□□ 1.791e-6■■■■□ 21.4
PAAF1-204ENST00000504441 FBLN2P98095 1184 aa26.25■■□□□ 1.79
PAAF1-204ENST00000504441 CHD1O14646 1710 aa26.2■■□□□ 1.79
PAAF1-204ENST00000504441 TARBP1Q13395 1621 aaKnown RBP26.19■■□□□ 1.78
PAAF1-204ENST00000504441 POLA1P09884 1462 aaPredicted RBP26.13■■□□□ 1.77
PAAF1-204ENST00000504441 TRHP20396 242 aaPredicted RBP26.13■■□□□ 1.77
PAAF1-204ENST00000504441 RAD54L2Q9Y4B4 1467 aa26.1■■□□□ 1.77
PAAF1-204ENST00000504441 ARAP1Q96P48 1450 aa26.09■■□□□ 1.77
PAAF1-204ENST00000504441 TDRD9Q8NDG6 1382 aaKnown RBP26.07■■□□□ 1.76
PAAF1-204ENST00000504441 SOGA1O94964 1423 aa26.04■■□□□ 1.76
PAAF1-204ENST00000504441 SNAPC4Q5SXM2 1469 aa25.97■■□□□ 1.75
PAAF1-204ENST00000504441 FGD5Q6ZNL6 1462 aa25.95■■□□□ 1.74
PAAF1-204ENST00000504441 CHMP7Q8WUX9 453 aaPredicted RBP25.93■■□□□ 1.74
PAAF1-204ENST00000504441 CUX1P39880 1505 aa25.86■■□□□ 1.73
PAAF1-204ENST00000504441 CLASP1Q7Z460 1538 aa25.86■■□□□ 1.73
PAAF1-204ENST00000504441 SYNJ1O43426 1573 aa25.84■■□□□ 1.73
PAAF1-204ENST00000504441 MAGI1Q96QZ7 1491 aaPredicted RBP25.84■■□□□ 1.73
PAAF1-204ENST00000504441 WDR97A6NE52 1622 aa25.83■■□□□ 1.73
PAAF1-204ENST00000504441 GRIN2BQ13224 1484 aa25.82■■□□□ 1.72
PAAF1-204ENST00000504441 SYNJ2O15056 1496 aa25.78■■□□□ 1.72
PAAF1-204ENST00000504441 GAPVD1Q14C86 1478 aa25.7■■□□□ 1.7
PAAF1-204ENST00000504441 PBRM1Q86U86 1689 aa25.69■■□□□ 1.7
PAAF1-204ENST00000504441 AEBP2Q6ZN18 517 aaPredicted RBP25.6■■□□□ 1.69
PAAF1-204ENST00000504441 ABCA10Q8WWZ4 1543 aa25.59■■□□□ 1.69
PAAF1-204ENST00000504441 ABCA5Q8WWZ7 1642 aa25.58■■□□□ 1.69
PAAF1-204ENST00000504441 SUPT5HO00267 1087 aaKnown RBP25.54■■□□□ 1.68
PAAF1-204ENST00000504441 GRIN2AQ12879 1464 aa25.5■■□□□ 1.67
PAAF1-204ENST00000504441 ERCC6L2Q5T890 1561 aa25.5■■□□□ 1.67
PAAF1-204ENST00000504441 WRNQ14191 1432 aaPredicted RBP eCLIP25.46■■□□□ 1.67
PAAF1-204ENST00000504441 ADAMTS12P58397 1594 aa25.43■■□□□ 1.66
PAAF1-204ENST00000504441 CEP170Q5SW79 1584 aa25.43■■□□□ 1.66
PAAF1-204ENST00000504441 NUP160Q12769 1436 aa25.39■■□□□ 1.66
PAAF1-204ENST00000504441 FHAD1B1AJZ9 1412 aa25.35■■□□□ 1.65
PAAF1-204ENST00000504441 TOP2BQ02880 1626 aa25.33■■□□□ 1.65
PAAF1-204ENST00000504441 BIVM-ERCC5R4GMW8 1640 aa25.32■■□□□ 1.64
PAAF1-204ENST00000504441 SHROOM2Q13796 1616 aa25.3■■□□□ 1.64
PAAF1-204ENST00000504441 ERICH3Q5RHP9 1530 aa25.26■■□□□ 1.63
PAAF1-204ENST00000504441 PRG4Q92954 1404 aaPredicted RBP25.24■■□□□ 1.63
PAAF1-204ENST00000504441 JPH4Q96JJ6 628 aa25.19■■□□□ 1.62
PAAF1-204ENST00000504441 KIF13AQ9H1H9 1805 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms