RNA–Protein interactions for RNA: ENST00000562209.1

CYBA-203, Transcript of cytochrome b-245 alpha chain, humanhuman

TSL 5

Gene CYBA, Length 624 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYBA-203ENST00000562209 NISCHQ9Y2I1 1504 aa48.67■■■■■ 5.38
CYBA-203ENST00000562209 ABCC9O60706 1549 aa43.64■■■■■ 4.58
CYBA-203ENST00000562209 CCDC180Q9P1Z9 1646 aa43.56■■■■■ 4.56
CYBA-203ENST00000562209 RB1CC1Q8TDY2 1594 aa41.45■■■■■ 4.23
CYBA-203ENST00000562209 NACADO15069 1562 aa41.17■■■■■ 4.18
CYBA-203ENST00000562209 DCAF8L2P0C7V8 631 aa41.15■■■■■ 4.18
CYBA-203ENST00000562209 DNAJC5BQ9UF47 199 aa40.97■■■■■ 4.15
CYBA-203ENST00000562209 PABPN1Q86U42 306 aaKnown RBP eCLIP40.7■■■■■ 4.11
CYBA-203ENST00000562209 UNC13AQ9UPW8 1703 aa40.62■■■■■ 4.09
CYBA-203ENST00000562209 MYO15BQ96JP2 1530 aa40.58■■■■■ 4.09
CYBA-203ENST00000562209 BICRAQ9NZM4 1560 aa40.35■■■■■ 4.05
CYBA-203ENST00000562209 ZCCHC6Q5VYS8 1495 aaKnown RBP40.34■■■■■ 4.05
CYBA-203ENST00000562209 DCAF1Q9Y4B6 1507 aa40.11■■■■■ 4.01
CYBA-203ENST00000562209 SCRIBQ14160 1630 aa39.83■■■■□ 3.97
CYBA-203ENST00000562209 SHROOM4Q9ULL8 1493 aa39.6■■■■□ 3.93
CYBA-203ENST00000562209 CC2D2AQ9P2K1 1620 aa39.39■■■■□ 3.9
CYBA-203ENST00000562209 EIF4G1Q04637 1599 aaKnown RBP39.3■■■■□ 3.88
CYBA-203ENST00000562209 CECR2Q9BXF3 1484 aa39.25■■■■□ 3.87
CYBA-203ENST00000562209 NCAPD3P42695 1498 aa38.04■■■■□ 3.68
CYBA-203ENST00000562209 ATAD2BQ9ULI0 1458 aa37.98■■■■□ 3.67
CYBA-203ENST00000562209 SMARCA4P51532 1647 aa37.95■■■■□ 3.67
CYBA-203ENST00000562209 SMARCA2P51531 1590 aa37.8■■■■□ 3.64
CYBA-203ENST00000562209 HMGXB3Q12766 1538 aa37.74■■■■□ 3.63
CYBA-203ENST00000562209 BAZ1AQ9NRL2 1556 aaPredicted RBP37.72■■■■□ 3.63
CYBA-203ENST00000562209 ERCC6Q03468 1493 aa37.6■■■■□ 3.61
CYBA-203ENST00000562209 BAZ1BQ9UIG0 1483 aaKnown RBP37.59■■■■□ 3.61
CYBA-203ENST00000562209 MROH2BQ7Z745 1585 aa37.57■■■■□ 3.6
CYBA-203ENST00000562209 NESP48681 1621 aa37.55■■■■□ 3.6
CYBA-203ENST00000562209 PEG3Q9GZU2 1588 aa37.54■■■■□ 3.6
CYBA-203ENST00000562209 CUX2O14529 1486 aa37.45■■■■□ 3.59
CYBA-203ENST00000562209 DNAJC5Q9H3Z4 198 aa37.43■■■■□ 3.58
CYBA-203ENST00000562209 LAMC3Q9Y6N6 1575 aa37.15■■■■□ 3.54
CYBA-203ENST00000562209 WIZO95785 1651 aa37.13■■■■□ 3.53
CYBA-203ENST00000562209 THOC2Q8NI27 1593 aaKnown RBP37.07■■■■□ 3.52
CYBA-203ENST00000562209 KIF21AQ7Z4S6 1674 aa37.02■■■■□ 3.52
CYBA-203ENST00000562209 PDS5BQ9NTI5 1447 aa36.93■■■■□ 3.5
CYBA-203ENST00000562209 CADPSQ9ULU8 1353 aa36.91■■■■□ 3.5
CYBA-203ENST00000562209 RSF1Q96T23 1441 aaPredicted RBP36.79■■■■□ 3.48
CYBA-203ENST00000562209 MRC2Q9UBG0 1479 aa36.64■■■■□ 3.46
CYBA-203ENST00000562209 TOP2AP11388 1531 aaKnown RBP36.58■■■■□ 3.45
CYBA-203ENST00000562209 WDR62O43379 1518 aa36.54■■■■□ 3.44
CYBA-203ENST00000562209 CFTRP13569 1480 aa36.5■■■■□ 3.43
CYBA-203ENST00000562209 FANCD2Q9BXW9 1451 aa36.5■■■■□ 3.43
CYBA-203ENST00000562209 CEP164Q9UPV0 1460 aa36.5■■■■□ 3.43
CYBA-203ENST00000562209 URB2Q14146 1524 aaKnown RBP36.24■■■■□ 3.39
CYBA-203ENST00000562209 CCDC88BA6NC98 1476 aa36.23■■■■□ 3.39
CYBA-203ENST00000562209 PRDM2Q13029 1718 aa36.11■■■■□ 3.37
CYBA-203ENST00000562209 TRIM41Q8WV44 630 aa35.89■■■■□ 3.34
CYBA-203ENST00000562209 TOPBP1Q92547 1522 aa35.83■■■■□ 3.33
CYBA-203ENST00000562209 ZNF608Q9ULD9 1512 aaPredicted RBP35.82■■■■□ 3.32
CYBA-203ENST00000562209 OSCARQ8IYS5 282 aa35.8■■■■□ 3.32
CYBA-203ENST00000562209 IFT140Q96RY7 1462 aa35.76■■■■□ 3.32
CYBA-203ENST00000562209 DNMBPQ6XZF7 1577 aa35.68■■■■□ 3.3
CYBA-203ENST00000562209 ABCC8Q09428 1581 aa35.64■■■■□ 3.3
CYBA-203ENST00000562209 EIF4G3O43432 1585 aaKnown RBP35.55■■■■□ 3.28
CYBA-203ENST00000562209 TARBP1Q13395 1621 aaKnown RBP35.52■■■■□ 3.28
CYBA-203ENST00000562209 AQRO60306 1485 aaKnown RBP eCLIP35.49■■■■□ 3.278e-7■■■■■ 38.1
CYBA-203ENST00000562209 POLA1P09884 1462 aaPredicted RBP35.48■■■■□ 3.27
CYBA-203ENST00000562209 RAD54L2Q9Y4B4 1467 aa35.41■■■■□ 3.26
CYBA-203ENST00000562209 RIMBP3CA6NJZ7 1639 aa35.38■■■■□ 3.25
CYBA-203ENST00000562209 RIMBP3BA6NNM3 1639 aa35.38■■■■□ 3.25
CYBA-203ENST00000562209 RIMBP3Q9UFD9 1639 aa35.38■■■■□ 3.25
CYBA-203ENST00000562209 SOGA1O94964 1423 aa35.32■■■■□ 3.24
CYBA-203ENST00000562209 SUPT5HO00267 1087 aaKnown RBP35.3■■■■□ 3.24
CYBA-203ENST00000562209 CHD1O14646 1710 aa35.29■■■■□ 3.24
CYBA-203ENST00000562209 TDRD9Q8NDG6 1382 aaKnown RBP35.28■■■■□ 3.24
CYBA-203ENST00000562209 CUX1P39880 1505 aa35.27■■■■□ 3.24
CYBA-203ENST00000562209 FGD5Q6ZNL6 1462 aa35.27■■■■□ 3.24
CYBA-203ENST00000562209 ARHGEF11O15085 1522 aa35.26■■■■□ 3.23
CYBA-203ENST00000562209 FBLN2P98095 1184 aa35.23■■■■□ 3.23
CYBA-203ENST00000562209 SNAPC4Q5SXM2 1469 aa35.09■■■■□ 3.21
CYBA-203ENST00000562209 CYB5RLQ6IPT4 315 aa35.04■■■■□ 3.2
CYBA-203ENST00000562209 WDR97A6NE52 1622 aa35.02■■■■□ 3.2
CYBA-203ENST00000562209 GRIN2BQ13224 1484 aa34.96■■■■□ 3.19
CYBA-203ENST00000562209 ARAP1Q96P48 1450 aa34.94■■■■□ 3.18
CYBA-203ENST00000562209 CHMP7Q8WUX9 453 aaPredicted RBP34.93■■■■□ 3.18
CYBA-203ENST00000562209 MAGI1Q96QZ7 1491 aaPredicted RBP34.92■■■■□ 3.18
CYBA-203ENST00000562209 CLASP1Q7Z460 1538 aa34.87■■■■□ 3.17
CYBA-203ENST00000562209 GAPVD1Q14C86 1478 aa34.87■■■■□ 3.17
CYBA-203ENST00000562209 PBRM1Q86U86 1689 aa34.86■■■■□ 3.17
CYBA-203ENST00000562209 SYNJ2O15056 1496 aa34.84■■■■□ 3.17
CYBA-203ENST00000562209 ABCA10Q8WWZ4 1543 aa34.83■■■■□ 3.17
CYBA-203ENST00000562209 SYNJ1O43426 1573 aa34.8■■■■□ 3.16
CYBA-203ENST00000562209 ABCA5Q8WWZ7 1642 aa34.8■■■■□ 3.16
CYBA-203ENST00000562209 WRNQ14191 1432 aaPredicted RBP eCLIP34.7■■■■□ 3.15
CYBA-203ENST00000562209 TOP2BQ02880 1626 aa34.68■■■■□ 3.14
CYBA-203ENST00000562209 BIVM-ERCC5R4GMW8 1640 aa34.68■■■■□ 3.14
CYBA-203ENST00000562209 TRHP20396 242 aaPredicted RBP34.6■■■■□ 3.13
CYBA-203ENST00000562209 GRIN2AQ12879 1464 aa34.52■■■■□ 3.12
CYBA-203ENST00000562209 ADAMTS12P58397 1594 aa34.52■■■■□ 3.12
CYBA-203ENST00000562209 CEP170Q5SW79 1584 aa34.45■■■■□ 3.11
CYBA-203ENST00000562209 ERCC6L2Q5T890 1561 aa34.44■■■■□ 3.1
CYBA-203ENST00000562209 FHAD1B1AJZ9 1412 aa34.4■■■■□ 3.1
CYBA-203ENST00000562209 NUP160Q12769 1436 aa34.4■■■■□ 3.1
CYBA-203ENST00000562209 ERICH3Q5RHP9 1530 aa34.37■■■■□ 3.09
CYBA-203ENST00000562209 SHROOM2Q13796 1616 aa34.24■■■■□ 3.07
CYBA-203ENST00000562209 PRG4Q92954 1404 aaPredicted RBP34.1■■■■□ 3.05
CYBA-203ENST00000562209 JPH4Q96JJ6 628 aa34.08■■■■□ 3.05
CYBA-203ENST00000562209 RUSC2Q8N2Y8 1516 aa34.04■■■■□ 3.04
CYBA-203ENST00000562209 IGF1RP08069 1367 aa34.03■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms