RNA–Protein interactions for RNA: ENST00000395542.6

COBL-203, Transcript of cordon-bleu WH2 repeat protein, humanhuman

TSL 1 (best) BASIC

Gene COBL, Length 5,339 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COBL-203ENST00000395542 DCAF8L2P0C7V8 631 aa26.71■■□□□ 1.87
COBL-203ENST00000395542 NISCHQ9Y2I1 1504 aa25.88■■□□□ 1.73
COBL-203ENST00000395542 SUPT5HO00267 1087 aaKnown RBP25.49■■□□□ 1.67
COBL-203ENST00000395542 SHROOM4Q9ULL8 1493 aa24.98■■□□□ 1.59
COBL-203ENST00000395542 EHMT2Q96KQ7 1210 aa24.73■■□□□ 1.55
COBL-203ENST00000395542 FAM9AQ8IZU1 332 aaPredicted RBP24.08■■□□□ 1.44
COBL-203ENST00000395542 APLP2Q06481 763 aa24.03■■□□□ 1.44
COBL-203ENST00000395542 TTBK1Q5TCY1 1321 aaPredicted RBP23.89■■□□□ 1.41
COBL-203ENST00000395542 PCGF6Q9BYE7 350 aa23.89■■□□□ 1.41
COBL-203ENST00000395542 PELP1Q8IZL8 1130 aaKnown RBP23.87■■□□□ 1.41
COBL-203ENST00000395542 RANGAP1P46060 587 aaPredicted RBP23.58■■□□□ 1.37
COBL-203ENST00000395542 TRIM41Q8WV44 630 aa23.51■■□□□ 1.35
COBL-203ENST00000395542 CCER1Q8TC90 406 aaPredicted RBP23.36■■□□□ 1.33
COBL-203ENST00000395542 ATP1B4Q9UN42 357 aaPredicted RBP23.27■■□□□ 1.32
COBL-203ENST00000395542 ZEB1P37275 1124 aaPredicted RBP23.27■■□□□ 1.32
COBL-203ENST00000395542 CENPBP07199 599 aaPredicted RBP23.25■■□□□ 1.31
COBL-203ENST00000395542 UBTFP17480 764 aaKnown RBP23.24■■□□□ 1.31
COBL-203ENST00000395542 PPARGC1BQ86YN6 1023 aaKnown RBP23.05■■□□□ 1.28
COBL-203ENST00000395542 ERICH6Q7L0X2 663 aa22.95■■□□□ 1.26
COBL-203ENST00000395542 YTHDC1Q96MU7 727 aaKnown RBP22.93■■□□□ 1.26
COBL-203ENST00000395542 TRIM26Q12899 539 aaPredicted RBP22.75■■□□□ 1.23
COBL-203ENST00000395542 NEFLP07196 543 aa22.73■■□□□ 1.23
COBL-203ENST00000395542 LOC105371045A0A1W2PR82 267 aa22.69■■□□□ 1.22
COBL-203ENST00000395542 ITGAEP38570 1179 aa22.59■■□□□ 1.21
COBL-203ENST00000395542 CHIC1Q5VXU3 224 aa22.58■■□□□ 1.21
COBL-203ENST00000395542 HRCP23327 699 aa22.57■■□□□ 1.2
COBL-203ENST00000395542 HNRNPUL2Q1KMD3 747 aaKnown RBP22.45■■□□□ 1.18
COBL-203ENST00000395542 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.4■■□□□ 1.18
COBL-203ENST00000395542 POLR3GLQ9BT43 218 aa22.36■■□□□ 1.17
COBL-203ENST00000395542 MYT1LQ9UL68 1186 aa22.27■■□□□ 1.15
COBL-203ENST00000395542 CNGB1Q14028 1251 aaPredicted RBP22.25■■□□□ 1.15
COBL-203ENST00000395542 MYT1Q01538 1121 aa22.2■■□□□ 1.14
COBL-203ENST00000395542 DAXXQ9UER7 740 aaPredicted RBP22.02■■□□□ 1.12
COBL-203ENST00000395542 DIEXFQ68CQ4 756 aaKnown RBP22.01■■□□□ 1.11
COBL-203ENST00000395542 FAM50AQ14320 339 aaKnown RBP21.93■■□□□ 1.1
COBL-203ENST00000395542 PABPN1Q86U42 306 aaKnown RBP eCLIP21.93■■□□□ 1.1
COBL-203ENST00000395542 ABCC9O60706 1549 aa21.91■■□□□ 1.1
COBL-203ENST00000395542 SLC4A1APQ9BWU0 796 aaKnown RBP21.84■■□□□ 1.09
COBL-203ENST00000395542 NEUROD1Q13562 356 aa21.8■■□□□ 1.08
COBL-203ENST00000395542 TRIM52Q96A61 297 aa21.79■■□□□ 1.08
COBL-203ENST00000395542 CCDC180Q9P1Z9 1646 aa21.73■■□□□ 1.07
COBL-203ENST00000395542 CLSPNQ9HAW4 1339 aa21.65■■□□□ 1.06
COBL-203ENST00000395542 BCANQ96GW7 911 aa21.61■■□□□ 1.05
COBL-203ENST00000395542 ZNF326Q5BKZ1 582 aaKnown RBP21.59■■□□□ 1.05
COBL-203ENST00000395542 GTF3C3Q9Y5Q9 886 aa21.59■■□□□ 1.05
COBL-203ENST00000395542 RTL5Q5HYW3 569 aaPredicted RBP21.53■■□□□ 1.04
COBL-203ENST00000395542 ZCCHC6Q5VYS8 1495 aaKnown RBP21.53■■□□□ 1.04
COBL-203ENST00000395542 ZNF316A6NFI3 1004 aaPredicted RBP21.52■■□□□ 1.04
COBL-203ENST00000395542 ANP32CO43423 234 aa21.51■■□□□ 1.03
COBL-203ENST00000395542 FBLN2P98095 1184 aa21.48■■□□□ 1.03
COBL-203ENST00000395542 P3H3Q8IVL6 736 aa21.47■■□□□ 1.03
COBL-203ENST00000395542 CSRNP3Q8WYN3 585 aa21.44■■□□□ 1.02
COBL-203ENST00000395542 ARID3CA6NKF2 412 aa21.41■■□□□ 1.02
COBL-203ENST00000395542 CDK11AQ9UQ88 783 aaPredicted RBP21.3■■□□□ 1
COBL-203ENST00000395542 ACIN1Q9UKV3 1341 aaKnown RBP21.24■□□□□ 0.99
COBL-203ENST00000395542 ZNF777Q9ULD5 760 aaPredicted RBP21.21■□□□□ 0.99
COBL-203ENST00000395542 BCL11AQ9H165 835 aa21.18■□□□□ 0.98
COBL-203ENST00000395542 SCRIBQ14160 1630 aa21.14■□□□□ 0.98
COBL-203ENST00000395542 ZBTB47Q9UFB7 747 aaPredicted RBP21.14■□□□□ 0.97
COBL-203ENST00000395542 CANXP27824 592 aaKnown RBP21.13■□□□□ 0.97
COBL-203ENST00000395542 SLC24A1O60721 1099 aa21.08■□□□□ 0.97
COBL-203ENST00000395542 NEFMP07197 916 aa21■□□□□ 0.95
COBL-203ENST00000395542 DDX10Q13206 875 aaKnown RBP20.99■□□□□ 0.95
COBL-203ENST00000395542 TONSLQ96HA7 1378 aa20.98■□□□□ 0.95
COBL-203ENST00000395542 FKBP8Q14318 412 aa20.97■□□□□ 0.95
COBL-203ENST00000395542 NPM2Q86SE8 214 aaKnown RBP20.93■□□□□ 0.94
COBL-203ENST00000395542 HNRNPUQ00839 825 aaKnown RBP eCLIP20.93■□□□□ 0.94
COBL-203ENST00000395542 ANP32AP39687 249 aaKnown RBP20.92■□□□□ 0.94
COBL-203ENST00000395542 RB1CC1Q8TDY2 1594 aa20.9■□□□□ 0.94
COBL-203ENST00000395542 FAM9BQ8IZU0 186 aa20.9■□□□□ 0.94
COBL-203ENST00000395542 CHIC2Q9UKJ5 165 aa20.89■□□□□ 0.94
COBL-203ENST00000395542 CHGAP10645 457 aaKnown RBP20.87■□□□□ 0.93
COBL-203ENST00000395542 DCAF1Q9Y4B6 1507 aa20.86■□□□□ 0.93
COBL-203ENST00000395542 SALL2Q9Y467 1007 aaPredicted RBP20.85■□□□□ 0.93
COBL-203ENST00000395542 NACADO15069 1562 aa20.84■□□□□ 0.93
COBL-203ENST00000395542 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.75■□□□□ 0.913e-7■□□□□ 8.8
COBL-203ENST00000395542 ESF1Q9H501 851 aaKnown RBP20.73■□□□□ 0.91
COBL-203ENST00000395542 HIRIP3Q9BW71 556 aaPredicted RBP20.73■□□□□ 0.91
COBL-203ENST00000395542 STAG3Q9UJ98 1225 aa20.73■□□□□ 0.91
COBL-203ENST00000395542 TMC1Q8TDI8 760 aa20.72■□□□□ 0.91
COBL-203ENST00000395542 MIER1Q8N108 512 aa20.69■□□□□ 0.9
COBL-203ENST00000395542 KDM2AQ9Y2K7 1162 aa20.69■□□□□ 0.9
COBL-203ENST00000395542 PLPPR3Q6T4P5 718 aa20.66■□□□□ 0.9
COBL-203ENST00000395542 MRS2Q9HD23 443 aa20.66■□□□□ 0.9
COBL-203ENST00000395542 TSPY4P0CV99 314 aa20.64■□□□□ 0.89
COBL-203ENST00000395542 TSPY10P0CW01 314 aa20.64■□□□□ 0.89
COBL-203ENST00000395542 CCDC136Q96JN2 1154 aa20.64■□□□□ 0.89
COBL-203ENST00000395542 MTUS2Q5JR59 1369 aa20.64■□□□□ 0.89
COBL-203ENST00000395542 NPM1P06748 294 aaKnown RBP eCLIP20.63■□□□□ 0.89
COBL-203ENST00000395542 HSP90AA1P07900 732 aaKnown RBP20.62■□□□□ 0.89
COBL-203ENST00000395542 CLIP1P30622 1438 aa20.61■□□□□ 0.89
COBL-203ENST00000395542 IRX6P78412 446 aaPredicted RBP20.59■□□□□ 0.89
COBL-203ENST00000395542 UPF2Q9HAU5 1272 aaKnown RBP20.57■□□□□ 0.88
COBL-203ENST00000395542 RRP7BPQ9NSQ0 103 aa20.56■□□□□ 0.88
COBL-203ENST00000395542 SCAF1Q9H7N4 1312 aaKnown RBP20.55■□□□□ 0.88
COBL-203ENST00000395542 WDR43Q15061 677 aaKnown RBP eCLIP20.54■□□□□ 0.88
COBL-203ENST00000395542 CHMP7Q8WUX9 453 aaPredicted RBP20.51■□□□□ 0.87
COBL-203ENST00000395542 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.5■□□□□ 0.87
COBL-203ENST00000395542 EIF4G2P78344 907 aaKnown RBP eCLIP20.5■□□□□ 0.87
COBL-203ENST00000395542 MYO15BQ96JP2 1530 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms