RNA–Protein interactions for RNA: ENST00000543814.5

PAAF1-213, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 5

Gene PAAF1, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-213ENST00000543814 NISCHQ9Y2I1 1504 aa43.68■■■■■ 4.58
PAAF1-213ENST00000543814 ABCC9O60706 1549 aa40.39■■■■■ 4.06
PAAF1-213ENST00000543814 CCDC180Q9P1Z9 1646 aa39.56■■■■□ 3.92
PAAF1-213ENST00000543814 DNAJC5BQ9UF47 199 aa38.71■■■■□ 3.79
PAAF1-213ENST00000543814 RB1CC1Q8TDY2 1594 aa38.07■■■■□ 3.69
PAAF1-213ENST00000543814 NACADO15069 1562 aa37.61■■■■□ 3.61
PAAF1-213ENST00000543814 PABPN1Q86U42 306 aaKnown RBP eCLIP37.47■■■■□ 3.59
PAAF1-213ENST00000543814 DCAF8L2P0C7V8 631 aa37.19■■■■□ 3.54
PAAF1-213ENST00000543814 UNC13AQ9UPW8 1703 aa37.18■■■■□ 3.54
PAAF1-213ENST00000543814 BICRAQ9NZM4 1560 aa37.03■■■■□ 3.52
PAAF1-213ENST00000543814 MYO15BQ96JP2 1530 aa36.85■■■■□ 3.49
PAAF1-213ENST00000543814 CECR2Q9BXF3 1484 aa36.48■■■■□ 3.43
PAAF1-213ENST00000543814 CC2D2AQ9P2K1 1620 aa36.45■■■■□ 3.42
PAAF1-213ENST00000543814 SHROOM4Q9ULL8 1493 aa36.43■■■■□ 3.42
PAAF1-213ENST00000543814 DNAJC5Q9H3Z4 198 aa36.18■■■■□ 3.38
PAAF1-213ENST00000543814 EIF4G1Q04637 1599 aaKnown RBP36.16■■■■□ 3.38
PAAF1-213ENST00000543814 DCAF1Q9Y4B6 1507 aa36.05■■■■□ 3.36
PAAF1-213ENST00000543814 ZCCHC6Q5VYS8 1495 aaKnown RBP36.02■■■■□ 3.36
PAAF1-213ENST00000543814 SCRIBQ14160 1630 aa35.96■■■■□ 3.35
PAAF1-213ENST00000543814 CUX2O14529 1486 aa35.18■■■■□ 3.22
PAAF1-213ENST00000543814 ERCC6Q03468 1493 aa34.9■■■■□ 3.18
PAAF1-213ENST00000543814 NCAPD3P42695 1498 aa34.77■■■■□ 3.16
PAAF1-213ENST00000543814 ATAD2BQ9ULI0 1458 aa34.52■■■■□ 3.12
PAAF1-213ENST00000543814 NESP48681 1621 aa34.46■■■■□ 3.11
PAAF1-213ENST00000543814 HMGXB3Q12766 1538 aa34.4■■■■□ 3.1
PAAF1-213ENST00000543814 SMARCA2P51531 1590 aa34.36■■■■□ 3.09
PAAF1-213ENST00000543814 THOC2Q8NI27 1593 aaKnown RBP34.28■■■■□ 3.08
PAAF1-213ENST00000543814 SMARCA4P51532 1647 aa34.24■■■■□ 3.07
PAAF1-213ENST00000543814 TRIM41Q8WV44 630 aa34.16■■■■□ 3.06
PAAF1-213ENST00000543814 BAZ1BQ9UIG0 1483 aaKnown RBP34.11■■■■□ 3.05
PAAF1-213ENST00000543814 LAMC3Q9Y6N6 1575 aa34.09■■■■□ 3.05
PAAF1-213ENST00000543814 KIF21AQ7Z4S6 1674 aa33.96■■■■□ 3.03
PAAF1-213ENST00000543814 PEG3Q9GZU2 1588 aa33.95■■■■□ 3.03
PAAF1-213ENST00000543814 BAZ1AQ9NRL2 1556 aaPredicted RBP33.95■■■■□ 3.03
PAAF1-213ENST00000543814 PDS5BQ9NTI5 1447 aa33.92■■■■□ 3.02
PAAF1-213ENST00000543814 MRC2Q9UBG0 1479 aa33.68■■■□□ 2.98
PAAF1-213ENST00000543814 CADPSQ9ULU8 1353 aa33.65■■■□□ 2.98
PAAF1-213ENST00000543814 MROH2BQ7Z745 1585 aa33.64■■■□□ 2.98
PAAF1-213ENST00000543814 WDR62O43379 1518 aa33.63■■■□□ 2.97
PAAF1-213ENST00000543814 OSCARQ8IYS5 282 aa33.44■■■□□ 2.94
PAAF1-213ENST00000543814 CEP164Q9UPV0 1460 aa33.36■■■□□ 2.93
PAAF1-213ENST00000543814 FANCD2Q9BXW9 1451 aa33.25■■■□□ 2.91
PAAF1-213ENST00000543814 WIZO95785 1651 aa33.18■■■□□ 2.9
PAAF1-213ENST00000543814 CFTRP13569 1480 aa33.09■■■□□ 2.89
PAAF1-213ENST00000543814 RIMBP3CA6NJZ7 1639 aa33.07■■■□□ 2.88
PAAF1-213ENST00000543814 RIMBP3BA6NNM3 1639 aa33.07■■■□□ 2.88
PAAF1-213ENST00000543814 RIMBP3Q9UFD9 1639 aa33.07■■■□□ 2.88
PAAF1-213ENST00000543814 URB2Q14146 1524 aaKnown RBP33.05■■■□□ 2.88
PAAF1-213ENST00000543814 ARHGEF11O15085 1522 aa32.88■■■□□ 2.85
PAAF1-213ENST00000543814 ZNF608Q9ULD9 1512 aaPredicted RBP32.77■■■□□ 2.84
PAAF1-213ENST00000543814 IFT140Q96RY7 1462 aa32.74■■■□□ 2.83
PAAF1-213ENST00000543814 TOP2AP11388 1531 aaKnown RBP32.72■■■□□ 2.83
PAAF1-213ENST00000543814 CYB5RLQ6IPT4 315 aa32.7■■■□□ 2.83
PAAF1-213ENST00000543814 RSF1Q96T23 1441 aaPredicted RBP32.65■■■□□ 2.82
PAAF1-213ENST00000543814 PRDM2Q13029 1718 aa32.62■■■□□ 2.81
PAAF1-213ENST00000543814 TRHP20396 242 aaPredicted RBP32.6■■■□□ 2.81
PAAF1-213ENST00000543814 TOPBP1Q92547 1522 aa32.53■■■□□ 2.8
PAAF1-213ENST00000543814 EIF4G3O43432 1585 aaKnown RBP32.53■■■□□ 2.8
PAAF1-213ENST00000543814 ARAP1Q96P48 1450 aa32.52■■■□□ 2.8
PAAF1-213ENST00000543814 CHD1O14646 1710 aa32.43■■■□□ 2.78
PAAF1-213ENST00000543814 ABCC8Q09428 1581 aa32.41■■■□□ 2.78
PAAF1-213ENST00000543814 CCDC88BA6NC98 1476 aa32.37■■■□□ 2.77
PAAF1-213ENST00000543814 AQRO60306 1485 aaKnown RBP eCLIP32.37■■■□□ 2.771e-6■■■■□ 21.4
PAAF1-213ENST00000543814 DNMBPQ6XZF7 1577 aa32.32■■■□□ 2.77
PAAF1-213ENST00000543814 TARBP1Q13395 1621 aaKnown RBP32.32■■■□□ 2.76
PAAF1-213ENST00000543814 FBLN2P98095 1184 aa32.29■■■□□ 2.76
PAAF1-213ENST00000543814 AEBP2Q6ZN18 517 aaPredicted RBP32.27■■■□□ 2.76
PAAF1-213ENST00000543814 POLA1P09884 1462 aaPredicted RBP32.15■■■□□ 2.74
PAAF1-213ENST00000543814 CLASP1Q7Z460 1538 aa32.09■■■□□ 2.73
PAAF1-213ENST00000543814 RAD54L2Q9Y4B4 1467 aa32.04■■■□□ 2.72
PAAF1-213ENST00000543814 TDRD9Q8NDG6 1382 aaKnown RBP32.03■■■□□ 2.72
PAAF1-213ENST00000543814 SNAPC4Q5SXM2 1469 aa31.99■■■□□ 2.71
PAAF1-213ENST00000543814 SOGA1O94964 1423 aa31.99■■■□□ 2.71
PAAF1-213ENST00000543814 SYNJ1O43426 1573 aa31.96■■■□□ 2.71
PAAF1-213ENST00000543814 CHMP7Q8WUX9 453 aaPredicted RBP31.94■■■□□ 2.7
PAAF1-213ENST00000543814 WDR97A6NE52 1622 aa31.92■■■□□ 2.7
PAAF1-213ENST00000543814 MAGI1Q96QZ7 1491 aaPredicted RBP31.89■■■□□ 2.7
PAAF1-213ENST00000543814 FGD5Q6ZNL6 1462 aa31.82■■■□□ 2.68
PAAF1-213ENST00000543814 SYNJ2O15056 1496 aa31.8■■■□□ 2.68
PAAF1-213ENST00000543814 GRIN2BQ13224 1484 aa31.8■■■□□ 2.68
PAAF1-213ENST00000543814 GAPVD1Q14C86 1478 aa31.79■■■□□ 2.68
PAAF1-213ENST00000543814 CUX1P39880 1505 aa31.65■■■□□ 2.66
PAAF1-213ENST00000543814 PBRM1Q86U86 1689 aa31.58■■■□□ 2.65
PAAF1-213ENST00000543814 ERCC6L2Q5T890 1561 aa31.51■■■□□ 2.64
PAAF1-213ENST00000543814 ABCA5Q8WWZ7 1642 aa31.44■■■□□ 2.62
PAAF1-213ENST00000543814 ABCA10Q8WWZ4 1543 aa31.42■■■□□ 2.62
PAAF1-213ENST00000543814 GRIN2AQ12879 1464 aa31.4■■■□□ 2.62
PAAF1-213ENST00000543814 CEP170Q5SW79 1584 aa31.39■■■□□ 2.61
PAAF1-213ENST00000543814 NUP160Q12769 1436 aa31.34■■■□□ 2.61
PAAF1-213ENST00000543814 KIF13AQ9H1H9 1805 aa31.31■■■□□ 2.6
PAAF1-213ENST00000543814 SHROOM2Q13796 1616 aa31.29■■■□□ 2.6
PAAF1-213ENST00000543814 ADAMTS12P58397 1594 aa31.25■■■□□ 2.59
PAAF1-213ENST00000543814 FHAD1B1AJZ9 1412 aa31.15■■■□□ 2.58
PAAF1-213ENST00000543814 WRNQ14191 1432 aaPredicted RBP eCLIP31.12■■■□□ 2.57
PAAF1-213ENST00000543814 PRG4Q92954 1404 aaPredicted RBP31.09■■■□□ 2.57
PAAF1-213ENST00000543814 ABCC10Q5T3U5 1492 aa31.08■■■□□ 2.57
PAAF1-213ENST00000543814 FAM69CQ0P6D2 419 aa31.08■■■□□ 2.57
PAAF1-213ENST00000543814 KDM4FA0A1W2PPD8 638 aa31.04■■■□□ 2.56
PAAF1-213ENST00000543814 JPH4Q96JJ6 628 aa31.02■■■□□ 2.56
PAAF1-213ENST00000543814 ERICH3Q5RHP9 1530 aa31■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms