RNA–Protein interactions for RNA: ENST00000639481.1

CROCCP2-205, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

TSL 1 (best) BASIC

Gene CROCCP2, Length 1,296 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-205ENST00000639481 NISCHQ9Y2I1 1504 aa48.1■■■■■ 5.29
CROCCP2-205ENST00000639481 CCDC180Q9P1Z9 1646 aa43.04■■■■■ 4.48
CROCCP2-205ENST00000639481 ABCC9O60706 1549 aa42.73■■■■■ 4.43
CROCCP2-205ENST00000639481 RB1CC1Q8TDY2 1594 aa40.78■■■■■ 4.12
CROCCP2-205ENST00000639481 NACADO15069 1562 aa40.57■■■■■ 4.09
CROCCP2-205ENST00000639481 DCAF8L2P0C7V8 631 aa40.35■■■■■ 4.05
CROCCP2-205ENST00000639481 MYO15BQ96JP2 1530 aa40.11■■■■■ 4.01
CROCCP2-205ENST00000639481 UNC13AQ9UPW8 1703 aa40.03■■■■■ 4
CROCCP2-205ENST00000639481 ZCCHC6Q5VYS8 1495 aaKnown RBP39.94■■■■□ 3.98
CROCCP2-205ENST00000639481 DNAJC5BQ9UF47 199 aa39.86■■■■□ 3.97
CROCCP2-205ENST00000639481 PABPN1Q86U42 306 aaKnown RBP eCLIP39.81■■■■□ 3.96
CROCCP2-205ENST00000639481 DCAF1Q9Y4B6 1507 aa39.72■■■■□ 3.95
CROCCP2-205ENST00000639481 BICRAQ9NZM4 1560 aa39.69■■■■□ 3.94
CROCCP2-205ENST00000639481 SCRIBQ14160 1630 aa39.25■■■■□ 3.87
CROCCP2-205ENST00000639481 SHROOM4Q9ULL8 1493 aa39.04■■■■□ 3.84
CROCCP2-205ENST00000639481 CC2D2AQ9P2K1 1620 aa38.65■■■■□ 3.78
CROCCP2-205ENST00000639481 EIF4G1Q04637 1599 aaKnown RBP38.63■■■■□ 3.77
CROCCP2-205ENST00000639481 CECR2Q9BXF3 1484 aa38.43■■■■□ 3.74
CROCCP2-205ENST00000639481 SMARCA4P51532 1647 aa37.48■■■■□ 3.59
CROCCP2-205ENST00000639481 NCAPD3P42695 1498 aa37.45■■■■□ 3.59
CROCCP2-205ENST00000639481 ATAD2BQ9ULI0 1458 aa37.4■■■■□ 3.58
CROCCP2-205ENST00000639481 BAZ1AQ9NRL2 1556 aaPredicted RBP37.29■■■■□ 3.56
CROCCP2-205ENST00000639481 SMARCA2P51531 1590 aa37.28■■■■□ 3.56
CROCCP2-205ENST00000639481 HMGXB3Q12766 1538 aa37.23■■■■□ 3.55
CROCCP2-205ENST00000639481 PEG3Q9GZU2 1588 aa37.11■■■■□ 3.53
CROCCP2-205ENST00000639481 MROH2BQ7Z745 1585 aa37.1■■■■□ 3.53
CROCCP2-205ENST00000639481 BAZ1BQ9UIG0 1483 aaKnown RBP37.03■■■■□ 3.52
CROCCP2-205ENST00000639481 NESP48681 1621 aa36.84■■■■□ 3.49
CROCCP2-205ENST00000639481 ERCC6Q03468 1493 aa36.8■■■■□ 3.48
CROCCP2-205ENST00000639481 WIZO95785 1651 aa36.7■■■■□ 3.47
CROCCP2-205ENST00000639481 CUX2O14529 1486 aa36.65■■■■□ 3.46
CROCCP2-205ENST00000639481 LAMC3Q9Y6N6 1575 aa36.57■■■■□ 3.45
CROCCP2-205ENST00000639481 THOC2Q8NI27 1593 aaKnown RBP36.42■■■■□ 3.42
CROCCP2-205ENST00000639481 KIF21AQ7Z4S6 1674 aa36.42■■■■□ 3.42
CROCCP2-205ENST00000639481 RSF1Q96T23 1441 aaPredicted RBP36.41■■■■□ 3.42
CROCCP2-205ENST00000639481 CADPSQ9ULU8 1353 aa36.3■■■■□ 3.4
CROCCP2-205ENST00000639481 PDS5BQ9NTI5 1447 aa36.28■■■■□ 3.4
CROCCP2-205ENST00000639481 DNAJC5Q9H3Z4 198 aa36.28■■■■□ 3.4
CROCCP2-205ENST00000639481 TOP2AP11388 1531 aaKnown RBP36.19■■■■□ 3.38
CROCCP2-205ENST00000639481 MRC2Q9UBG0 1479 aa36■■■■□ 3.35
CROCCP2-205ENST00000639481 CFTRP13569 1480 aa35.99■■■■□ 3.35
CROCCP2-205ENST00000639481 WDR62O43379 1518 aa35.95■■■■□ 3.35
CROCCP2-205ENST00000639481 FANCD2Q9BXW9 1451 aa35.92■■■■□ 3.34
CROCCP2-205ENST00000639481 CEP164Q9UPV0 1460 aa35.92■■■■□ 3.34
CROCCP2-205ENST00000639481 CCDC88BA6NC98 1476 aa35.78■■■■□ 3.32
CROCCP2-205ENST00000639481 PRDM2Q13029 1718 aa35.75■■■■□ 3.31
CROCCP2-205ENST00000639481 URB2Q14146 1524 aaKnown RBP35.66■■■■□ 3.3
CROCCP2-205ENST00000639481 TOPBP1Q92547 1522 aa35.3■■■■□ 3.24
CROCCP2-205ENST00000639481 DNMBPQ6XZF7 1577 aa35.19■■■■□ 3.22
CROCCP2-205ENST00000639481 ZNF608Q9ULD9 1512 aaPredicted RBP35.17■■■■□ 3.22
CROCCP2-205ENST00000639481 IFT140Q96RY7 1462 aa35.17■■■■□ 3.22
CROCCP2-205ENST00000639481 ABCC8Q09428 1581 aa35.15■■■■□ 3.22
CROCCP2-205ENST00000639481 TARBP1Q13395 1621 aaKnown RBP35.02■■■■□ 3.2
CROCCP2-205ENST00000639481 EIF4G3O43432 1585 aaKnown RBP35■■■■□ 3.19
CROCCP2-205ENST00000639481 OSCARQ8IYS5 282 aa34.97■■■■□ 3.19
CROCCP2-205ENST00000639481 POLA1P09884 1462 aaPredicted RBP34.97■■■■□ 3.19
CROCCP2-205ENST00000639481 SUPT5HO00267 1087 aaKnown RBP34.95■■■■□ 3.19
CROCCP2-205ENST00000639481 AQRO60306 1485 aaKnown RBP eCLIP34.85■■■■□ 3.172e-10■■■■■ 29.8
CROCCP2-205ENST00000639481 CUX1P39880 1505 aa34.84■■■■□ 3.17
CROCCP2-205ENST00000639481 RAD54L2Q9Y4B4 1467 aa34.84■■■■□ 3.17
CROCCP2-205ENST00000639481 TRIM41Q8WV44 630 aa34.8■■■■□ 3.16
CROCCP2-205ENST00000639481 FGD5Q6ZNL6 1462 aa34.78■■■■□ 3.16
CROCCP2-205ENST00000639481 SOGA1O94964 1423 aa34.75■■■■□ 3.15
CROCCP2-205ENST00000639481 CHD1O14646 1710 aa34.72■■■■□ 3.15
CROCCP2-205ENST00000639481 TDRD9Q8NDG6 1382 aaKnown RBP34.66■■■■□ 3.14
CROCCP2-205ENST00000639481 RIMBP3CA6NJZ7 1639 aa34.63■■■■□ 3.13
CROCCP2-205ENST00000639481 RIMBP3BA6NNM3 1639 aa34.63■■■■□ 3.13
CROCCP2-205ENST00000639481 RIMBP3Q9UFD9 1639 aa34.63■■■■□ 3.13
CROCCP2-205ENST00000639481 WDR97A6NE52 1622 aa34.61■■■■□ 3.13
CROCCP2-205ENST00000639481 ARHGEF11O15085 1522 aa34.52■■■■□ 3.12
CROCCP2-205ENST00000639481 SNAPC4Q5SXM2 1469 aa34.51■■■■□ 3.11
CROCCP2-205ENST00000639481 FBLN2P98095 1184 aa34.47■■■■□ 3.11
CROCCP2-205ENST00000639481 PBRM1Q86U86 1689 aa34.42■■■■□ 3.1
CROCCP2-205ENST00000639481 GRIN2BQ13224 1484 aa34.42■■■■□ 3.1
CROCCP2-205ENST00000639481 MAGI1Q96QZ7 1491 aaPredicted RBP34.39■■■■□ 3.1
CROCCP2-205ENST00000639481 ABCA10Q8WWZ4 1543 aa34.39■■■■□ 3.1
CROCCP2-205ENST00000639481 ABCA5Q8WWZ7 1642 aa34.37■■■■□ 3.09
CROCCP2-205ENST00000639481 BIVM-ERCC5R4GMW8 1640 aa34.37■■■■□ 3.09
CROCCP2-205ENST00000639481 GAPVD1Q14C86 1478 aa34.35■■■■□ 3.09
CROCCP2-205ENST00000639481 SYNJ1O43426 1573 aa34.35■■■■□ 3.09
CROCCP2-205ENST00000639481 TOP2BQ02880 1626 aa34.34■■■■□ 3.09
CROCCP2-205ENST00000639481 WRNQ14191 1432 aaPredicted RBP eCLIP34.3■■■■□ 3.08
CROCCP2-205ENST00000639481 CLASP1Q7Z460 1538 aa34.29■■■■□ 3.08
CROCCP2-205ENST00000639481 SYNJ2O15056 1496 aa34.28■■■■□ 3.08
CROCCP2-205ENST00000639481 CHMP7Q8WUX9 453 aaPredicted RBP34.26■■■■□ 3.08
CROCCP2-205ENST00000639481 ARAP1Q96P48 1450 aa34.22■■■■□ 3.07
CROCCP2-205ENST00000639481 CYB5RLQ6IPT4 315 aa34.17■■■■□ 3.06
CROCCP2-205ENST00000639481 ADAMTS12P58397 1594 aa34.06■■■■□ 3.04
CROCCP2-205ENST00000639481 GRIN2AQ12879 1464 aa34.01■■■■□ 3.04
CROCCP2-205ENST00000639481 ERICH3Q5RHP9 1530 aa33.95■■■■□ 3.03
CROCCP2-205ENST00000639481 CEP170Q5SW79 1584 aa33.94■■■■□ 3.02
CROCCP2-205ENST00000639481 FHAD1B1AJZ9 1412 aa33.91■■■■□ 3.02
CROCCP2-205ENST00000639481 NUP160Q12769 1436 aa33.89■■■■□ 3.02
CROCCP2-205ENST00000639481 ERCC6L2Q5T890 1561 aa33.83■■■■□ 3.01
CROCCP2-205ENST00000639481 SHROOM2Q13796 1616 aa33.75■■■□□ 2.99
CROCCP2-205ENST00000639481 TRHP20396 242 aaPredicted RBP33.65■■■□□ 2.98
CROCCP2-205ENST00000639481 RUSC2Q8N2Y8 1516 aa33.6■■■□□ 2.97
CROCCP2-205ENST00000639481 KIF27Q86VH2 1401 aa33.59■■■□□ 2.97
CROCCP2-205ENST00000639481 IGF1RP08069 1367 aa33.59■■■□□ 2.97
CROCCP2-205ENST00000639481 CUL7Q14999 1698 aa33.54■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms