RNA–Protein interactions for RNA: ENST00000395540.6

COBL-202, Transcript of cordon-bleu WH2 repeat protein, humanhuman

TSL 1 (best) BASIC

Gene COBL, Length 2,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COBL-202ENST00000395540 NISCHQ9Y2I1 1504 aa38.16■■■■□ 3.7
COBL-202ENST00000395540 SHROOM4Q9ULL8 1493 aa32.66■■■□□ 2.82
COBL-202ENST00000395540 CCDC180Q9P1Z9 1646 aa32.46■■■□□ 2.79
COBL-202ENST00000395540 ZCCHC6Q5VYS8 1495 aaKnown RBP32.38■■■□□ 2.77
COBL-202ENST00000395540 SUPT5HO00267 1087 aaKnown RBP32.22■■■□□ 2.75
COBL-202ENST00000395540 MYO15BQ96JP2 1530 aa31.63■■■□□ 2.65
COBL-202ENST00000395540 CHIC1Q5VXU3 224 aa31.63■■■□□ 2.65
COBL-202ENST00000395540 DCAF8L2P0C7V8 631 aa31.5■■■□□ 2.63
COBL-202ENST00000395540 DCAF1Q9Y4B6 1507 aa31.38■■■□□ 2.61
COBL-202ENST00000395540 HRCP23327 699 aa31.37■■■□□ 2.61
COBL-202ENST00000395540 PCGF6Q9BYE7 350 aa30.99■■■□□ 2.55
COBL-202ENST00000395540 ABCC9O60706 1549 aa30.65■■■□□ 2.5
COBL-202ENST00000395540 LOC105371045A0A1W2PR82 267 aa30.63■■■□□ 2.49
COBL-202ENST00000395540 PPARGC1BQ86YN6 1023 aaKnown RBP30.55■■■□□ 2.48
COBL-202ENST00000395540 TRIM26Q12899 539 aaPredicted RBP30.39■■■□□ 2.46
COBL-202ENST00000395540 RSF1Q96T23 1441 aaPredicted RBP30.33■■■□□ 2.45
COBL-202ENST00000395540 SCRIBQ14160 1630 aa30.3■■■□□ 2.44
COBL-202ENST00000395540 NACADO15069 1562 aa30.13■■■□□ 2.41
COBL-202ENST00000395540 RB1CC1Q8TDY2 1594 aa30.11■■■□□ 2.41
COBL-202ENST00000395540 TRIM41Q8WV44 630 aa30.03■■■□□ 2.4
COBL-202ENST00000395540 ZEB1P37275 1124 aaPredicted RBP29.95■■■□□ 2.38
COBL-202ENST00000395540 FAM9AQ8IZU1 332 aaPredicted RBP29.72■■■□□ 2.35
COBL-202ENST00000395540 CECR2Q9BXF3 1484 aa29.69■■■□□ 2.34
COBL-202ENST00000395540 MROH2BQ7Z745 1585 aa29.66■■■□□ 2.34
COBL-202ENST00000395540 WIZO95785 1651 aa29.53■■■□□ 2.32
COBL-202ENST00000395540 BAZ1AQ9NRL2 1556 aaPredicted RBP29.44■■■□□ 2.3
COBL-202ENST00000395540 EIF4G1Q04637 1599 aaKnown RBP29.4■■■□□ 2.3
COBL-202ENST00000395540 EHMT2Q96KQ7 1210 aa29.39■■■□□ 2.3
COBL-202ENST00000395540 UNC13AQ9UPW8 1703 aa29.26■■■□□ 2.27
COBL-202ENST00000395540 SCAF1Q9H7N4 1312 aaKnown RBP29.12■■■□□ 2.25
COBL-202ENST00000395540 TOP2AP11388 1531 aaKnown RBP29.11■■■□□ 2.25
COBL-202ENST00000395540 PELP1Q8IZL8 1130 aaKnown RBP29.1■■■□□ 2.25
COBL-202ENST00000395540 WRNQ14191 1432 aaPredicted RBP eCLIP29.04■■■□□ 2.24
COBL-202ENST00000395540 PABPN1Q86U42 306 aaKnown RBP eCLIP29.02■■■□□ 2.24
COBL-202ENST00000395540 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.02■■■□□ 2.24
COBL-202ENST00000395540 SMARCA4P51532 1647 aa28.99■■■□□ 2.23
COBL-202ENST00000395540 ABCC8Q09428 1581 aa28.99■■■□□ 2.23
COBL-202ENST00000395540 CCER1Q8TC90 406 aaPredicted RBP28.98■■■□□ 2.23
COBL-202ENST00000395540 CCDC88BA6NC98 1476 aa28.97■■■□□ 2.23
COBL-202ENST00000395540 SMARCA2P51531 1590 aa28.96■■■□□ 2.23
COBL-202ENST00000395540 BICRAQ9NZM4 1560 aa28.95■■■□□ 2.22
COBL-202ENST00000395540 CEP162Q5TB80 1403 aa28.88■■■□□ 2.21
COBL-202ENST00000395540 TNIKQ9UKE5 1360 aa28.83■■■□□ 2.21
COBL-202ENST00000395540 EEA1Q15075 1411 aa28.8■■■□□ 2.2
COBL-202ENST00000395540 SOGA1O94964 1423 aa28.79■■■□□ 2.2
COBL-202ENST00000395540 ACIN1Q9UKV3 1341 aaKnown RBP28.74■■■□□ 2.19
COBL-202ENST00000395540 DIEXFQ68CQ4 756 aaKnown RBP28.67■■■□□ 2.18
COBL-202ENST00000395540 CSRNP3Q8WYN3 585 aa28.66■■■□□ 2.18
COBL-202ENST00000395540 NEUROD1Q13562 356 aa28.63■■■□□ 2.17
COBL-202ENST00000395540 RUSC2Q8N2Y8 1516 aa28.62■■■□□ 2.17
COBL-202ENST00000395540 GOLGA3Q08378 1498 aa28.59■■■□□ 2.17
COBL-202ENST00000395540 TTBK1Q5TCY1 1321 aaPredicted RBP28.57■■■□□ 2.16
COBL-202ENST00000395540 UBTFP17480 764 aaKnown RBP28.52■■■□□ 2.16
COBL-202ENST00000395540 CENPBP07199 599 aaPredicted RBP28.51■■■□□ 2.15
COBL-202ENST00000395540 PEG3Q9GZU2 1588 aa28.46■■■□□ 2.15
COBL-202ENST00000395540 KIF21BO75037 1637 aa28.41■■■□□ 2.14
COBL-202ENST00000395540 CEP164Q9UPV0 1460 aa28.39■■■□□ 2.14
COBL-202ENST00000395540 ZNF316A6NFI3 1004 aaPredicted RBP28.38■■■□□ 2.13
COBL-202ENST00000395540 GTF3C3Q9Y5Q9 886 aa28.37■■■□□ 2.13
COBL-202ENST00000395540 ATAD2BQ9ULI0 1458 aa28.35■■■□□ 2.13
COBL-202ENST00000395540 SYNJ1O43426 1573 aa28.34■■■□□ 2.13
COBL-202ENST00000395540 CLIP1P30622 1438 aa28.25■■■□□ 2.11
COBL-202ENST00000395540 BAZ1BQ9UIG0 1483 aaKnown RBP28.23■■■□□ 2.11
COBL-202ENST00000395540 VPS8Q8N3P4 1428 aa28.21■■■□□ 2.11
COBL-202ENST00000395540 HNRNPUL2Q1KMD3 747 aaKnown RBP28.12■■■□□ 2.09
COBL-202ENST00000395540 RAPGEF2Q9Y4G8 1499 aa28.09■■■□□ 2.09
COBL-202ENST00000395540 APLP2Q06481 763 aa28■■■□□ 2.07
COBL-202ENST00000395540 TOP2BQ02880 1626 aa27.99■■■□□ 2.07
COBL-202ENST00000395540 MIER1Q8N108 512 aa27.99■■■□□ 2.07
COBL-202ENST00000395540 YTHDC1Q96MU7 727 aaKnown RBP27.92■■■□□ 2.06
COBL-202ENST00000395540 BIVM-ERCC5R4GMW8 1640 aa27.91■■■□□ 2.06
COBL-202ENST00000395540 NCAPD3P42695 1498 aa27.9■■■□□ 2.06
COBL-202ENST00000395540 ERICH3Q5RHP9 1530 aa27.88■■■□□ 2.05
COBL-202ENST00000395540 CLSPNQ9HAW4 1339 aa27.86■■■□□ 2.05
COBL-202ENST00000395540 HMGXB3Q12766 1538 aa27.84■■■□□ 2.05
COBL-202ENST00000395540 PRXQ9BXM0 1461 aa27.82■■■□□ 2.04
COBL-202ENST00000395540 ARAP1Q96P48 1450 aa27.78■■■□□ 2.04
COBL-202ENST00000395540 MYT1Q01538 1121 aa27.75■■■□□ 2.03
COBL-202ENST00000395540 DHX57Q6P158 1386 aaKnown RBP27.75■■■□□ 2.03
COBL-202ENST00000395540 RANGAP1P46060 587 aaPredicted RBP27.74■■■□□ 2.03
COBL-202ENST00000395540 RRBP1Q9P2E9 1410 aaKnown RBP27.64■■■□□ 2.02
COBL-202ENST00000395540 KANK4Q5T7N3 995 aaPredicted RBP27.61■■■□□ 2.01
COBL-202ENST00000395540 CUX1P39880 1505 aa27.6■■■□□ 2.01
COBL-202ENST00000395540 CUX2O14529 1486 aa27.59■■■□□ 2.01
COBL-202ENST00000395540 KIF27Q86VH2 1401 aa27.56■■■□□ 2
COBL-202ENST00000395540 CFTRP13569 1480 aa27.53■■■□□ 2
COBL-202ENST00000395540 ARHGAP35Q9NRY4 1499 aa27.47■■□□□ 1.99
COBL-202ENST00000395540 CCNB3Q8WWL7 1395 aa27.45■■□□□ 1.99
COBL-202ENST00000395540 CC2D2AQ9P2K1 1620 aa27.43■■□□□ 1.98
COBL-202ENST00000395540 CADPSQ9ULU8 1353 aa27.32■■□□□ 1.96
COBL-202ENST00000395540 MAP3K1Q13233 1512 aa27.32■■□□□ 1.96
COBL-202ENST00000395540 PRDM2Q13029 1718 aa27.29■■□□□ 1.96
COBL-202ENST00000395540 SUPT16HQ9Y5B9 1047 aaKnown RBP27.28■■□□□ 1.96
COBL-202ENST00000395540 TIAM1Q13009 1591 aa27.27■■□□□ 1.96
COBL-202ENST00000395540 MAPKBP1O60336 1514 aa27.26■■□□□ 1.95
COBL-202ENST00000395540 RAB3GAP2Q9H2M9 1393 aa27.25■■□□□ 1.95
COBL-202ENST00000395540 IGF1RP08069 1367 aa27.21■■□□□ 1.95
COBL-202ENST00000395540 ITGAEP38570 1179 aa27.18■■□□□ 1.94
COBL-202ENST00000395540 LRRC9Q6ZRR7 1453 aa27.15■■□□□ 1.94
COBL-202ENST00000395540 SETD5Q9C0A6 1442 aa27.14■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 158 ms