RNA–Protein interactions for RNA: ENST00000381783.4

PAAF1-203, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 2

Gene PAAF1, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-203ENST00000381783 NISCHQ9Y2I1 1504 aa39.19■■■■□ 3.86
PAAF1-203ENST00000381783 CCDC180Q9P1Z9 1646 aa34.59■■■■□ 3.13
PAAF1-203ENST00000381783 ABCC9O60706 1549 aa33.49■■■□□ 2.95
PAAF1-203ENST00000381783 ZCCHC6Q5VYS8 1495 aaKnown RBP32.74■■■□□ 2.83
PAAF1-203ENST00000381783 DCAF8L2P0C7V8 631 aa32.65■■■□□ 2.82
PAAF1-203ENST00000381783 NACADO15069 1562 aa32.41■■■□□ 2.78
PAAF1-203ENST00000381783 DCAF1Q9Y4B6 1507 aa32.39■■■□□ 2.78
PAAF1-203ENST00000381783 RB1CC1Q8TDY2 1594 aa32.35■■■□□ 2.77
PAAF1-203ENST00000381783 MYO15BQ96JP2 1530 aa32.34■■■□□ 2.77
PAAF1-203ENST00000381783 SCRIBQ14160 1630 aa31.69■■■□□ 2.66
PAAF1-203ENST00000381783 UNC13AQ9UPW8 1703 aa31.67■■■□□ 2.66
PAAF1-203ENST00000381783 PABPN1Q86U42 306 aaKnown RBP eCLIP31.4■■■□□ 2.62
PAAF1-203ENST00000381783 BICRAQ9NZM4 1560 aa31.39■■■□□ 2.62
PAAF1-203ENST00000381783 SHROOM4Q9ULL8 1493 aa31.35■■■□□ 2.61
PAAF1-203ENST00000381783 CECR2Q9BXF3 1484 aa30.52■■■□□ 2.48
PAAF1-203ENST00000381783 EIF4G1Q04637 1599 aaKnown RBP30.52■■■□□ 2.48
PAAF1-203ENST00000381783 BAZ1AQ9NRL2 1556 aaPredicted RBP30.33■■■□□ 2.45
PAAF1-203ENST00000381783 DNAJC5BQ9UF47 199 aa30.33■■■□□ 2.45
PAAF1-203ENST00000381783 SMARCA4P51532 1647 aa30.31■■■□□ 2.44
PAAF1-203ENST00000381783 CC2D2AQ9P2K1 1620 aa30.29■■■□□ 2.44
PAAF1-203ENST00000381783 MROH2BQ7Z745 1585 aa30.24■■■□□ 2.43
PAAF1-203ENST00000381783 RSF1Q96T23 1441 aaPredicted RBP30.05■■■□□ 2.4
PAAF1-203ENST00000381783 ATAD2BQ9ULI0 1458 aa30.03■■■□□ 2.4
PAAF1-203ENST00000381783 SMARCA2P51531 1590 aa29.99■■■□□ 2.39
PAAF1-203ENST00000381783 PEG3Q9GZU2 1588 aa29.98■■■□□ 2.39
PAAF1-203ENST00000381783 WIZO95785 1651 aa29.96■■■□□ 2.39
PAAF1-203ENST00000381783 NCAPD3P42695 1498 aa29.91■■■□□ 2.38
PAAF1-203ENST00000381783 BAZ1BQ9UIG0 1483 aaKnown RBP29.81■■■□□ 2.36
PAAF1-203ENST00000381783 HMGXB3Q12766 1538 aa29.81■■■□□ 2.36
PAAF1-203ENST00000381783 SUPT5HO00267 1087 aaKnown RBP29.72■■■□□ 2.35
PAAF1-203ENST00000381783 TOP2AP11388 1531 aaKnown RBP29.61■■■□□ 2.33
PAAF1-203ENST00000381783 CCDC88BA6NC98 1476 aa29.29■■■□□ 2.28
PAAF1-203ENST00000381783 NESP48681 1621 aa29.13■■■□□ 2.25
PAAF1-203ENST00000381783 CADPSQ9ULU8 1353 aa29.09■■■□□ 2.25
PAAF1-203ENST00000381783 LAMC3Q9Y6N6 1575 aa29.05■■■□□ 2.24
PAAF1-203ENST00000381783 CFTRP13569 1480 aa29.01■■■□□ 2.24
PAAF1-203ENST00000381783 PDS5BQ9NTI5 1447 aa28.85■■■□□ 2.21
PAAF1-203ENST00000381783 PRDM2Q13029 1718 aa28.82■■■□□ 2.2
PAAF1-203ENST00000381783 ERCC6Q03468 1493 aa28.81■■■□□ 2.2
PAAF1-203ENST00000381783 KIF21AQ7Z4S6 1674 aa28.78■■■□□ 2.2
PAAF1-203ENST00000381783 FANCD2Q9BXW9 1451 aa28.77■■■□□ 2.2
PAAF1-203ENST00000381783 CEP164Q9UPV0 1460 aa28.68■■■□□ 2.18
PAAF1-203ENST00000381783 THOC2Q8NI27 1593 aaKnown RBP28.53■■■□□ 2.16
PAAF1-203ENST00000381783 MRC2Q9UBG0 1479 aa28.52■■■□□ 2.16
PAAF1-203ENST00000381783 URB2Q14146 1524 aaKnown RBP28.46■■■□□ 2.15
PAAF1-203ENST00000381783 WDR62O43379 1518 aa28.42■■■□□ 2.14
PAAF1-203ENST00000381783 ABCC8Q09428 1581 aa28.41■■■□□ 2.14
PAAF1-203ENST00000381783 TOPBP1Q92547 1522 aa28.36■■■□□ 2.13
PAAF1-203ENST00000381783 DNMBPQ6XZF7 1577 aa28.35■■■□□ 2.13
PAAF1-203ENST00000381783 CUX1P39880 1505 aa28.33■■■□□ 2.13
PAAF1-203ENST00000381783 WRNQ14191 1432 aaPredicted RBP eCLIP28.32■■■□□ 2.12
PAAF1-203ENST00000381783 CUX2O14529 1486 aa28.27■■■□□ 2.12
PAAF1-203ENST00000381783 SYNJ1O43426 1573 aa28.25■■■□□ 2.11
PAAF1-203ENST00000381783 TOP2BQ02880 1626 aa28.2■■■□□ 2.1
PAAF1-203ENST00000381783 BIVM-ERCC5R4GMW8 1640 aa28.18■■■□□ 2.1
PAAF1-203ENST00000381783 POLA1P09884 1462 aaPredicted RBP28.16■■■□□ 2.1
PAAF1-203ENST00000381783 FGD5Q6ZNL6 1462 aa28.16■■■□□ 2.1
PAAF1-203ENST00000381783 RAD54L2Q9Y4B4 1467 aa28.06■■■□□ 2.08
PAAF1-203ENST00000381783 SOGA1O94964 1423 aa28.05■■■□□ 2.08
PAAF1-203ENST00000381783 IFT140Q96RY7 1462 aa28.03■■■□□ 2.08
PAAF1-203ENST00000381783 TARBP1Q13395 1621 aaKnown RBP28.02■■■□□ 2.08
PAAF1-203ENST00000381783 TRIM41Q8WV44 630 aa28.01■■■□□ 2.07
PAAF1-203ENST00000381783 CHIC1Q5VXU3 224 aa27.97■■■□□ 2.07
PAAF1-203ENST00000381783 ZNF608Q9ULD9 1512 aaPredicted RBP27.93■■■□□ 2.06
PAAF1-203ENST00000381783 WDR97A6NE52 1622 aa27.89■■■□□ 2.05
PAAF1-203ENST00000381783 ABCA10Q8WWZ4 1543 aa27.88■■■□□ 2.05
PAAF1-203ENST00000381783 TDRD9Q8NDG6 1382 aaKnown RBP27.87■■■□□ 2.05
PAAF1-203ENST00000381783 AQRO60306 1485 aaKnown RBP eCLIP27.84■■■□□ 2.051e-6■■■■□ 21.4
PAAF1-203ENST00000381783 EIF4G3O43432 1585 aaKnown RBP27.82■■■□□ 2.04
PAAF1-203ENST00000381783 ABCA5Q8WWZ7 1642 aa27.74■■■□□ 2.03
PAAF1-203ENST00000381783 GAPVD1Q14C86 1478 aa27.73■■■□□ 2.03
PAAF1-203ENST00000381783 KIF27Q86VH2 1401 aa27.68■■■□□ 2.02
PAAF1-203ENST00000381783 PBRM1Q86U86 1689 aa27.64■■■□□ 2.02
PAAF1-203ENST00000381783 GRIN2BQ13224 1484 aa27.64■■■□□ 2.02
PAAF1-203ENST00000381783 RUSC2Q8N2Y8 1516 aa27.64■■■□□ 2.02
PAAF1-203ENST00000381783 SNAPC4Q5SXM2 1469 aa27.57■■■□□ 2
PAAF1-203ENST00000381783 ERICH3Q5RHP9 1530 aa27.55■■■□□ 2
PAAF1-203ENST00000381783 IGF1RP08069 1367 aa27.52■■■□□ 2
PAAF1-203ENST00000381783 MAGI1Q96QZ7 1491 aaPredicted RBP27.51■■□□□ 1.99
PAAF1-203ENST00000381783 FAM9AQ8IZU1 332 aaPredicted RBP27.48■■□□□ 1.99
PAAF1-203ENST00000381783 ADAMTS12P58397 1594 aa27.44■■□□□ 1.98
PAAF1-203ENST00000381783 FBLN2P98095 1184 aa27.44■■□□□ 1.98
PAAF1-203ENST00000381783 EEA1Q15075 1411 aa27.42■■□□□ 1.98
PAAF1-203ENST00000381783 SYNJ2O15056 1496 aa27.41■■□□□ 1.98
PAAF1-203ENST00000381783 FHAD1B1AJZ9 1412 aa27.41■■□□□ 1.98
PAAF1-203ENST00000381783 CUL7Q14999 1698 aa27.4■■□□□ 1.98
PAAF1-203ENST00000381783 CHMP7Q8WUX9 453 aaPredicted RBP27.4■■□□□ 1.98
PAAF1-203ENST00000381783 CHD1O14646 1710 aa27.39■■□□□ 1.97
PAAF1-203ENST00000381783 CSRNP3Q8WYN3 585 aa27.38■■□□□ 1.97
PAAF1-203ENST00000381783 CARMIL1Q5VZK9 1371 aa27.36■■□□□ 1.97
PAAF1-203ENST00000381783 GRIN2AQ12879 1464 aa27.31■■□□□ 1.96
PAAF1-203ENST00000381783 PRXQ9BXM0 1461 aa27.27■■□□□ 1.96
PAAF1-203ENST00000381783 RAPGEF2Q9Y4G8 1499 aa27.25■■□□□ 1.95
PAAF1-203ENST00000381783 OSCARQ8IYS5 282 aa27.23■■□□□ 1.95
PAAF1-203ENST00000381783 CEP170Q5SW79 1584 aa27.17■■□□□ 1.94
PAAF1-203ENST00000381783 NUP160Q12769 1436 aa27.14■■□□□ 1.94
PAAF1-203ENST00000381783 EHMT2Q96KQ7 1210 aa27.14■■□□□ 1.93
PAAF1-203ENST00000381783 KIF21BO75037 1637 aa27.14■■□□□ 1.93
PAAF1-203ENST00000381783 CLASP1Q7Z460 1538 aa27.06■■□□□ 1.92
PAAF1-203ENST00000381783 GOLGA3Q08378 1498 aa27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms