RNA–Protein interactions for RNA: ENST00000572059.1

PKMYT1-207, Transcript of protein kinase, membrane associated tyrosine/threonine 1, humanhuman

TSL 5

Gene PKMYT1, Length 880 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKMYT1-207ENST00000572059 NISCHQ9Y2I1 1504 aa40.69■■■■■ 4.1
PKMYT1-207ENST00000572059 ABCC9O60706 1549 aa36.91■■■■□ 3.5
PKMYT1-207ENST00000572059 CCDC180Q9P1Z9 1646 aa36.56■■■■□ 3.44
PKMYT1-207ENST00000572059 RB1CC1Q8TDY2 1594 aa34.96■■■■□ 3.19
PKMYT1-207ENST00000572059 DNAJC5BQ9UF47 199 aa34.89■■■■□ 3.18
PKMYT1-207ENST00000572059 NACADO15069 1562 aa34.66■■■■□ 3.14
PKMYT1-207ENST00000572059 DCAF8L2P0C7V8 631 aa34.51■■■■□ 3.12
PKMYT1-207ENST00000572059 PABPN1Q86U42 306 aaKnown RBP eCLIP34.35■■■■□ 3.09
PKMYT1-207ENST00000572059 UNC13AQ9UPW8 1703 aa34.15■■■■□ 3.06
PKMYT1-207ENST00000572059 MYO15BQ96JP2 1530 aa34.08■■■■□ 3.05
PKMYT1-207ENST00000572059 BICRAQ9NZM4 1560 aa33.98■■■■□ 3.03
PKMYT1-207ENST00000572059 ZCCHC6Q5VYS8 1495 aaKnown RBP33.67■■■□□ 2.98
PKMYT1-207ENST00000572059 DCAF1Q9Y4B6 1507 aa33.56■■■□□ 2.96
PKMYT1-207ENST00000572059 SHROOM4Q9ULL8 1493 aa33.44■■■□□ 2.94
PKMYT1-207ENST00000572059 SCRIBQ14160 1630 aa33.37■■■□□ 2.93
PKMYT1-207ENST00000572059 CC2D2AQ9P2K1 1620 aa33.3■■■□□ 2.92
PKMYT1-207ENST00000572059 CECR2Q9BXF3 1484 aa33.26■■■□□ 2.92
PKMYT1-207ENST00000572059 EIF4G1Q04637 1599 aaKnown RBP33.17■■■□□ 2.9
PKMYT1-207ENST00000572059 DNAJC5Q9H3Z4 198 aa32.17■■■□□ 2.74
PKMYT1-207ENST00000572059 NCAPD3P42695 1498 aa32.03■■■□□ 2.72
PKMYT1-207ENST00000572059 ATAD2BQ9ULI0 1458 aa31.91■■■□□ 2.7
PKMYT1-207ENST00000572059 CUX2O14529 1486 aa31.86■■■□□ 2.69
PKMYT1-207ENST00000572059 ERCC6Q03468 1493 aa31.85■■■□□ 2.69
PKMYT1-207ENST00000572059 SMARCA4P51532 1647 aa31.78■■■□□ 2.68
PKMYT1-207ENST00000572059 SMARCA2P51531 1590 aa31.76■■■□□ 2.67
PKMYT1-207ENST00000572059 HMGXB3Q12766 1538 aa31.74■■■□□ 2.67
PKMYT1-207ENST00000572059 NESP48681 1621 aa31.64■■■□□ 2.66
PKMYT1-207ENST00000572059 BAZ1AQ9NRL2 1556 aaPredicted RBP31.58■■■□□ 2.65
PKMYT1-207ENST00000572059 BAZ1BQ9UIG0 1483 aaKnown RBP31.57■■■□□ 2.64
PKMYT1-207ENST00000572059 PEG3Q9GZU2 1588 aa31.47■■■□□ 2.63
PKMYT1-207ENST00000572059 MROH2BQ7Z745 1585 aa31.38■■■□□ 2.61
PKMYT1-207ENST00000572059 THOC2Q8NI27 1593 aaKnown RBP31.33■■■□□ 2.61
PKMYT1-207ENST00000572059 LAMC3Q9Y6N6 1575 aa31.31■■■□□ 2.6
PKMYT1-207ENST00000572059 KIF21AQ7Z4S6 1674 aa31.16■■■□□ 2.58
PKMYT1-207ENST00000572059 PDS5BQ9NTI5 1447 aa31.15■■■□□ 2.58
PKMYT1-207ENST00000572059 CADPSQ9ULU8 1353 aa31.05■■■□□ 2.56
PKMYT1-207ENST00000572059 WIZO95785 1651 aa30.97■■■□□ 2.55
PKMYT1-207ENST00000572059 MRC2Q9UBG0 1479 aa30.92■■■□□ 2.54
PKMYT1-207ENST00000572059 WDR62O43379 1518 aa30.85■■■□□ 2.53
PKMYT1-207ENST00000572059 CEP164Q9UPV0 1460 aa30.74■■■□□ 2.51
PKMYT1-207ENST00000572059 FANCD2Q9BXW9 1451 aa30.7■■■□□ 2.51
PKMYT1-207ENST00000572059 TRIM41Q8WV44 630 aa30.69■■■□□ 2.5
PKMYT1-207ENST00000572059 RSF1Q96T23 1441 aaPredicted RBP30.64■■■□□ 2.49
PKMYT1-207ENST00000572059 CFTRP13569 1480 aa30.63■■■□□ 2.49
PKMYT1-207ENST00000572059 TOP2AP11388 1531 aaKnown RBP30.55■■■□□ 2.48
PKMYT1-207ENST00000572059 URB2Q14146 1524 aaKnown RBP30.47■■■□□ 2.47
PKMYT1-207ENST00000572059 OSCARQ8IYS5 282 aa30.38■■■□□ 2.45
PKMYT1-207ENST00000572059 CCDC88BA6NC98 1476 aa30.24■■■□□ 2.43
PKMYT1-207ENST00000572059 PRDM2Q13029 1718 aa30.22■■■□□ 2.43
PKMYT1-207ENST00000572059 ZNF608Q9ULD9 1512 aaPredicted RBP30.16■■■□□ 2.42
PKMYT1-207ENST00000572059 IFT140Q96RY7 1462 aa30.13■■■□□ 2.41
PKMYT1-207ENST00000572059 TOPBP1Q92547 1522 aa30.09■■■□□ 2.41
PKMYT1-207ENST00000572059 RIMBP3CA6NJZ7 1639 aa30.01■■■□□ 2.39
PKMYT1-207ENST00000572059 RIMBP3BA6NNM3 1639 aa30.01■■■□□ 2.39
PKMYT1-207ENST00000572059 RIMBP3Q9UFD9 1639 aa30.01■■■□□ 2.39
PKMYT1-207ENST00000572059 ABCC8Q09428 1581 aa29.96■■■□□ 2.39
PKMYT1-207ENST00000572059 EIF4G3O43432 1585 aaKnown RBP29.94■■■□□ 2.38
PKMYT1-207ENST00000572059 DNMBPQ6XZF7 1577 aa29.94■■■□□ 2.38
PKMYT1-207ENST00000572059 ARHGEF11O15085 1522 aa29.91■■■□□ 2.38
PKMYT1-207ENST00000572059 AQRO60306 1485 aaKnown RBP eCLIP29.85■■■□□ 2.376e-7■■■■■ 33.2
PKMYT1-207ENST00000572059 TARBP1Q13395 1621 aaKnown RBP29.83■■■□□ 2.37
PKMYT1-207ENST00000572059 POLA1P09884 1462 aaPredicted RBP29.77■■■□□ 2.36
PKMYT1-207ENST00000572059 CHD1O14646 1710 aa29.74■■■□□ 2.35
PKMYT1-207ENST00000572059 CYB5RLQ6IPT4 315 aa29.73■■■□□ 2.35
PKMYT1-207ENST00000572059 FBLN2P98095 1184 aa29.71■■■□□ 2.35
PKMYT1-207ENST00000572059 RAD54L2Q9Y4B4 1467 aa29.69■■■□□ 2.34
PKMYT1-207ENST00000572059 TDRD9Q8NDG6 1382 aaKnown RBP29.64■■■□□ 2.33
PKMYT1-207ENST00000572059 SOGA1O94964 1423 aa29.63■■■□□ 2.33
PKMYT1-207ENST00000572059 ARAP1Q96P48 1450 aa29.61■■■□□ 2.33
PKMYT1-207ENST00000572059 FGD5Q6ZNL6 1462 aa29.55■■■□□ 2.32
PKMYT1-207ENST00000572059 SNAPC4Q5SXM2 1469 aa29.52■■■□□ 2.32
PKMYT1-207ENST00000572059 CUX1P39880 1505 aa29.49■■■□□ 2.31
PKMYT1-207ENST00000572059 TRHP20396 242 aaPredicted RBP29.47■■■□□ 2.31
PKMYT1-207ENST00000572059 WDR97A6NE52 1622 aa29.45■■■□□ 2.3
PKMYT1-207ENST00000572059 CLASP1Q7Z460 1538 aa29.42■■■□□ 2.3
PKMYT1-207ENST00000572059 CHMP7Q8WUX9 453 aaPredicted RBP29.42■■■□□ 2.3
PKMYT1-207ENST00000572059 MAGI1Q96QZ7 1491 aaPredicted RBP29.4■■■□□ 2.3
PKMYT1-207ENST00000572059 GRIN2BQ13224 1484 aa29.39■■■□□ 2.3
PKMYT1-207ENST00000572059 SYNJ1O43426 1573 aa29.35■■■□□ 2.29
PKMYT1-207ENST00000572059 SYNJ2O15056 1496 aa29.32■■■□□ 2.28
PKMYT1-207ENST00000572059 GAPVD1Q14C86 1478 aa29.26■■■□□ 2.27
PKMYT1-207ENST00000572059 PBRM1Q86U86 1689 aa29.22■■■□□ 2.27
PKMYT1-207ENST00000572059 ABCA10Q8WWZ4 1543 aa29.19■■■□□ 2.26
PKMYT1-207ENST00000572059 ABCA5Q8WWZ7 1642 aa29.16■■■□□ 2.26
PKMYT1-207ENST00000572059 SUPT5HO00267 1087 aaKnown RBP29.12■■■□□ 2.25
PKMYT1-207ENST00000572059 GRIN2AQ12879 1464 aa29.02■■■□□ 2.24
PKMYT1-207ENST00000572059 WRNQ14191 1432 aaPredicted RBP eCLIP29.02■■■□□ 2.241e-7■■□□□ 12.5
PKMYT1-207ENST00000572059 ERCC6L2Q5T890 1561 aa28.99■■■□□ 2.23
PKMYT1-207ENST00000572059 ADAMTS12P58397 1594 aa28.96■■■□□ 2.23
PKMYT1-207ENST00000572059 NUP160Q12769 1436 aa28.94■■■□□ 2.22
PKMYT1-207ENST00000572059 CEP170Q5SW79 1584 aa28.93■■■□□ 2.22
PKMYT1-207ENST00000572059 TOP2BQ02880 1626 aa28.91■■■□□ 2.22
PKMYT1-207ENST00000572059 BIVM-ERCC5R4GMW8 1640 aa28.91■■■□□ 2.22
PKMYT1-207ENST00000572059 FHAD1B1AJZ9 1412 aa28.87■■■□□ 2.21
PKMYT1-207ENST00000572059 SHROOM2Q13796 1616 aa28.8■■■□□ 2.2
PKMYT1-207ENST00000572059 ERICH3Q5RHP9 1530 aa28.79■■■□□ 2.2
PKMYT1-207ENST00000572059 AEBP2Q6ZN18 517 aaPredicted RBP28.77■■■□□ 2.2
PKMYT1-207ENST00000572059 PRG4Q92954 1404 aaPredicted RBP28.69■■■□□ 2.18
PKMYT1-207ENST00000572059 JPH4Q96JJ6 628 aa28.64■■■□□ 2.18
PKMYT1-207ENST00000572059 RUSC2Q8N2Y8 1516 aa28.56■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms