RNA–Protein interactions for RNA: ENST00000310571.7

PAAF1-201, Transcript of proteasomal ATPase associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PAAF1, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-201ENST00000310571 NISCHQ9Y2I1 1504 aa26.35■■□□□ 1.81
PAAF1-201ENST00000310571 DCAF8L2P0C7V8 631 aa24.66■■□□□ 1.54
PAAF1-201ENST00000310571 SHROOM4Q9ULL8 1493 aa23.73■■□□□ 1.39
PAAF1-201ENST00000310571 SUPT5HO00267 1087 aaKnown RBP23.56■■□□□ 1.36
PAAF1-201ENST00000310571 EHMT2Q96KQ7 1210 aa22.21■■□□□ 1.15
PAAF1-201ENST00000310571 ABCC9O60706 1549 aa22.17■■□□□ 1.14
PAAF1-201ENST00000310571 CCDC180Q9P1Z9 1646 aa22.07■■□□□ 1.12
PAAF1-201ENST00000310571 FAM9AQ8IZU1 332 aaPredicted RBP22.02■■□□□ 1.12
PAAF1-201ENST00000310571 ZCCHC6Q5VYS8 1495 aaKnown RBP21.96■■□□□ 1.11
PAAF1-201ENST00000310571 TRIM41Q8WV44 630 aa21.91■■□□□ 1.1
PAAF1-201ENST00000310571 CHIC1Q5VXU3 224 aa21.67■■□□□ 1.06
PAAF1-201ENST00000310571 PABPN1Q86U42 306 aaKnown RBP eCLIP21.6■■□□□ 1.05
PAAF1-201ENST00000310571 PCGF6Q9BYE7 350 aa21.5■■□□□ 1.03
PAAF1-201ENST00000310571 SCRIBQ14160 1630 aa21.47■■□□□ 1.03
PAAF1-201ENST00000310571 APLP2Q06481 763 aa21.43■■□□□ 1.02
PAAF1-201ENST00000310571 TTBK1Q5TCY1 1321 aaPredicted RBP21.37■■□□□ 1.01
PAAF1-201ENST00000310571 RANGAP1P46060 587 aaPredicted RBP21.35■■□□□ 1.01
PAAF1-201ENST00000310571 UBTFP17480 764 aaKnown RBP21.34■■□□□ 1.01
PAAF1-201ENST00000310571 LOC105371045A0A1W2PR82 267 aa21.34■■□□□ 1.01
PAAF1-201ENST00000310571 DCAF1Q9Y4B6 1507 aa21.15■□□□□ 0.98
PAAF1-201ENST00000310571 NACADO15069 1562 aa21.08■□□□□ 0.97
PAAF1-201ENST00000310571 RB1CC1Q8TDY2 1594 aa21.08■□□□□ 0.97
PAAF1-201ENST00000310571 PPARGC1BQ86YN6 1023 aaKnown RBP21.04■□□□□ 0.96
PAAF1-201ENST00000310571 ATP1B4Q9UN42 357 aaPredicted RBP20.94■□□□□ 0.94
PAAF1-201ENST00000310571 TRIM26Q12899 539 aaPredicted RBP20.92■□□□□ 0.94
PAAF1-201ENST00000310571 RSF1Q96T23 1441 aaPredicted RBP20.88■□□□□ 0.93
PAAF1-201ENST00000310571 CCER1Q8TC90 406 aaPredicted RBP20.84■□□□□ 0.93
PAAF1-201ENST00000310571 ZEB1P37275 1124 aaPredicted RBP20.79■□□□□ 0.92
PAAF1-201ENST00000310571 CECR2Q9BXF3 1484 aa20.66■□□□□ 0.9
PAAF1-201ENST00000310571 MYO15BQ96JP2 1530 aa20.63■□□□□ 0.89
PAAF1-201ENST00000310571 HRCP23327 699 aa20.6■□□□□ 0.89
PAAF1-201ENST00000310571 CSRNP3Q8WYN3 585 aa20.57■□□□□ 0.88
PAAF1-201ENST00000310571 BAZ1AQ9NRL2 1556 aaPredicted RBP20.52■□□□□ 0.88
PAAF1-201ENST00000310571 HNRNPUL2Q1KMD3 747 aaKnown RBP20.45■□□□□ 0.86
PAAF1-201ENST00000310571 MROH2BQ7Z745 1585 aa20.44■□□□□ 0.86
PAAF1-201ENST00000310571 ITGAEP38570 1179 aa20.42■□□□□ 0.86
PAAF1-201ENST00000310571 BAZ1BQ9UIG0 1483 aaKnown RBP20.36■□□□□ 0.85
PAAF1-201ENST00000310571 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.32■□□□□ 0.84
PAAF1-201ENST00000310571 WIZO95785 1651 aa20.19■□□□□ 0.82
PAAF1-201ENST00000310571 WRNQ14191 1432 aaPredicted RBP eCLIP20.19■□□□□ 0.82
PAAF1-201ENST00000310571 CCDC88BA6NC98 1476 aa20.14■□□□□ 0.81
PAAF1-201ENST00000310571 P3H3Q8IVL6 736 aa20.14■□□□□ 0.81
PAAF1-201ENST00000310571 FAM50AQ14320 339 aaKnown RBP20.1■□□□□ 0.81
PAAF1-201ENST00000310571 FBLN2P98095 1184 aa20.08■□□□□ 0.81
PAAF1-201ENST00000310571 EEA1Q15075 1411 aa20.06■□□□□ 0.8
PAAF1-201ENST00000310571 TOP2AP11388 1531 aaKnown RBP20.04■□□□□ 0.8
PAAF1-201ENST00000310571 CENPBP07199 599 aaPredicted RBP20.03■□□□□ 0.8
PAAF1-201ENST00000310571 SMARCA2P51531 1590 aa20.02■□□□□ 0.8
PAAF1-201ENST00000310571 SMARCA4P51532 1647 aa20.01■□□□□ 0.79
PAAF1-201ENST00000310571 ABCC8Q09428 1581 aa19.96■□□□□ 0.79
PAAF1-201ENST00000310571 GOLGA3Q08378 1498 aa19.95■□□□□ 0.78
PAAF1-201ENST00000310571 CLIP1P30622 1438 aa19.93■□□□□ 0.78
PAAF1-201ENST00000310571 CEP162Q5TB80 1403 aa19.93■□□□□ 0.78
PAAF1-201ENST00000310571 SOGA1O94964 1423 aa19.92■□□□□ 0.78
PAAF1-201ENST00000310571 ATAD2BQ9ULI0 1458 aa19.91■□□□□ 0.78
PAAF1-201ENST00000310571 YTHDC1Q96MU7 727 aaKnown RBP19.91■□□□□ 0.78
PAAF1-201ENST00000310571 ARID3CA6NKF2 412 aa19.88■□□□□ 0.77
PAAF1-201ENST00000310571 TNIKQ9UKE5 1360 aa19.86■□□□□ 0.77
PAAF1-201ENST00000310571 KIF27Q86VH2 1401 aa19.86■□□□□ 0.77
PAAF1-201ENST00000310571 CEP164Q9UPV0 1460 aa19.84■□□□□ 0.77
PAAF1-201ENST00000310571 MYT1LQ9UL68 1186 aa19.84■□□□□ 0.77
PAAF1-201ENST00000310571 PELP1Q8IZL8 1130 aaKnown RBP19.81■□□□□ 0.76
PAAF1-201ENST00000310571 TRIM52Q96A61 297 aa19.77■□□□□ 0.75
PAAF1-201ENST00000310571 NEUROD1Q13562 356 aa19.75■□□□□ 0.75
PAAF1-201ENST00000310571 DIEXFQ68CQ4 756 aaKnown RBP19.74■□□□□ 0.75
PAAF1-201ENST00000310571 CUX2O14529 1486 aa19.67■□□□□ 0.74
PAAF1-201ENST00000310571 CDK11AQ9UQ88 783 aaPredicted RBP19.64■□□□□ 0.73
PAAF1-201ENST00000310571 CADPSQ9ULU8 1353 aa19.63■□□□□ 0.73
PAAF1-201ENST00000310571 CHMP7Q8WUX9 453 aaPredicted RBP19.63■□□□□ 0.73
PAAF1-201ENST00000310571 POLR3GLQ9BT43 218 aa19.61■□□□□ 0.73
PAAF1-201ENST00000310571 CARMIL1Q5VZK9 1371 aa19.58■□□□□ 0.73
PAAF1-201ENST00000310571 ZNF777Q9ULD5 760 aaPredicted RBP19.57■□□□□ 0.72
PAAF1-201ENST00000310571 ZNF316A6NFI3 1004 aaPredicted RBP19.55■□□□□ 0.72
PAAF1-201ENST00000310571 MTUS2Q5JR59 1369 aa19.54■□□□□ 0.72
PAAF1-201ENST00000310571 EIF4G1Q04637 1599 aaKnown RBP19.54■□□□□ 0.72
PAAF1-201ENST00000310571 ERCC6Q03468 1493 aa19.53■□□□□ 0.72
PAAF1-201ENST00000310571 RUSC2Q8N2Y8 1516 aa19.52■□□□□ 0.72
PAAF1-201ENST00000310571 NCAPD3P42695 1498 aa19.52■□□□□ 0.71
PAAF1-201ENST00000310571 PDS5BQ9NTI5 1447 aa19.51■□□□□ 0.71
PAAF1-201ENST00000310571 BICRAQ9NZM4 1560 aa19.48■□□□□ 0.71
PAAF1-201ENST00000310571 CNGB1Q14028 1251 aaPredicted RBP19.44■□□□□ 0.7
PAAF1-201ENST00000310571 NEFLP07196 543 aa19.43■□□□□ 0.7
PAAF1-201ENST00000310571 CHIC2Q9UKJ5 165 aa19.43■□□□□ 0.7
PAAF1-201ENST00000310571 VPS8Q8N3P4 1428 aa19.42■□□□□ 0.7
PAAF1-201ENST00000310571 TDRD9Q8NDG6 1382 aaKnown RBP19.42■□□□□ 0.7
PAAF1-201ENST00000310571 RAPGEF2Q9Y4G8 1499 aa19.4■□□□□ 0.7
PAAF1-201ENST00000310571 ZNF326Q5BKZ1 582 aaKnown RBP19.39■□□□□ 0.7
PAAF1-201ENST00000310571 FANCD2Q9BXW9 1451 aa19.38■□□□□ 0.69
PAAF1-201ENST00000310571 FHAD1B1AJZ9 1412 aa19.33■□□□□ 0.69
PAAF1-201ENST00000310571 UNC13AQ9UPW8 1703 aa19.3■□□□□ 0.68
PAAF1-201ENST00000310571 KANK4Q5T7N3 995 aaPredicted RBP19.29■□□□□ 0.68
PAAF1-201ENST00000310571 TONSLQ96HA7 1378 aa19.28■□□□□ 0.68
PAAF1-201ENST00000310571 RRP7BPQ9NSQ0 103 aa19.25■□□□□ 0.67
PAAF1-201ENST00000310571 HMGXB3Q12766 1538 aa19.24■□□□□ 0.67
PAAF1-201ENST00000310571 CFTRP13569 1480 aa19.23■□□□□ 0.67
PAAF1-201ENST00000310571 PLEKHD1A6NEE1 506 aa19.23■□□□□ 0.67
PAAF1-201ENST00000310571 CCNB3Q8WWL7 1395 aa19.22■□□□□ 0.67
PAAF1-201ENST00000310571 FGD5Q6ZNL6 1462 aa19.22■□□□□ 0.67
PAAF1-201ENST00000310571 ANP32CO43423 234 aa19.22■□□□□ 0.67
PAAF1-201ENST00000310571 SYNJ1O43426 1573 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms