RNA–Protein interactions for RNA: ENST00000561972.1

CYBA-202, Transcript of cytochrome b-245 alpha chain, humanhuman

TSL 3

Gene CYBA, Length 464 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYBA-202ENST00000561972 NISCHQ9Y2I1 1504 aa38.68■■■■□ 3.78
CYBA-202ENST00000561972 ABCC9O60706 1549 aa34.71■■■■□ 3.15
CYBA-202ENST00000561972 CCDC180Q9P1Z9 1646 aa34.7■■■■□ 3.14
CYBA-202ENST00000561972 RB1CC1Q8TDY2 1594 aa33■■■□□ 2.87
CYBA-202ENST00000561972 NACADO15069 1562 aa32.78■■■□□ 2.84
CYBA-202ENST00000561972 DCAF8L2P0C7V8 631 aa32.68■■■□□ 2.82
CYBA-202ENST00000561972 DNAJC5BQ9UF47 199 aa32.56■■■□□ 2.8
CYBA-202ENST00000561972 UNC13AQ9UPW8 1703 aa32.37■■■□□ 2.77
CYBA-202ENST00000561972 PABPN1Q86U42 306 aaKnown RBP eCLIP32.33■■■□□ 2.77
CYBA-202ENST00000561972 MYO15BQ96JP2 1530 aa32.3■■■□□ 2.76
CYBA-202ENST00000561972 BICRAQ9NZM4 1560 aa32.09■■■□□ 2.73
CYBA-202ENST00000561972 ZCCHC6Q5VYS8 1495 aaKnown RBP32.04■■■□□ 2.72
CYBA-202ENST00000561972 DCAF1Q9Y4B6 1507 aa31.91■■■□□ 2.7
CYBA-202ENST00000561972 SCRIBQ14160 1630 aa31.65■■■□□ 2.66
CYBA-202ENST00000561972 SHROOM4Q9ULL8 1493 aa31.54■■■□□ 2.64
CYBA-202ENST00000561972 CC2D2AQ9P2K1 1620 aa31.35■■■□□ 2.61
CYBA-202ENST00000561972 EIF4G1Q04637 1599 aaKnown RBP31.28■■■□□ 2.6
CYBA-202ENST00000561972 CECR2Q9BXF3 1484 aa31.23■■■□□ 2.59
CYBA-202ENST00000561972 NCAPD3P42695 1498 aa30.25■■■□□ 2.43
CYBA-202ENST00000561972 ATAD2BQ9ULI0 1458 aa30.19■■■□□ 2.42
CYBA-202ENST00000561972 SMARCA4P51532 1647 aa30.18■■■□□ 2.42
CYBA-202ENST00000561972 SMARCA2P51531 1590 aa30.08■■■□□ 2.41
CYBA-202ENST00000561972 HMGXB3Q12766 1538 aa30.03■■■□□ 2.4
CYBA-202ENST00000561972 BAZ1AQ9NRL2 1556 aaPredicted RBP30.01■■■□□ 2.39
CYBA-202ENST00000561972 ERCC6Q03468 1493 aa29.93■■■□□ 2.38
CYBA-202ENST00000561972 BAZ1BQ9UIG0 1483 aaKnown RBP29.89■■■□□ 2.38
CYBA-202ENST00000561972 PEG3Q9GZU2 1588 aa29.86■■■□□ 2.37
CYBA-202ENST00000561972 CUX2O14529 1486 aa29.84■■■□□ 2.37
CYBA-202ENST00000561972 NESP48681 1621 aa29.84■■■□□ 2.37
CYBA-202ENST00000561972 MROH2BQ7Z745 1585 aa29.83■■■□□ 2.37
CYBA-202ENST00000561972 DNAJC5Q9H3Z4 198 aa29.82■■■□□ 2.36
CYBA-202ENST00000561972 LAMC3Q9Y6N6 1575 aa29.59■■■□□ 2.33
CYBA-202ENST00000561972 THOC2Q8NI27 1593 aaKnown RBP29.51■■■□□ 2.31
CYBA-202ENST00000561972 WIZO95785 1651 aa29.5■■■□□ 2.31
CYBA-202ENST00000561972 KIF21AQ7Z4S6 1674 aa29.48■■■□□ 2.31
CYBA-202ENST00000561972 PDS5BQ9NTI5 1447 aa29.39■■■□□ 2.3
CYBA-202ENST00000561972 CADPSQ9ULU8 1353 aa29.34■■■□□ 2.29
CYBA-202ENST00000561972 RSF1Q96T23 1441 aaPredicted RBP29.23■■■□□ 2.27
CYBA-202ENST00000561972 MRC2Q9UBG0 1479 aa29.16■■■□□ 2.26
CYBA-202ENST00000561972 WDR62O43379 1518 aa29.09■■■□□ 2.25
CYBA-202ENST00000561972 TOP2AP11388 1531 aaKnown RBP29.07■■■□□ 2.24
CYBA-202ENST00000561972 CEP164Q9UPV0 1460 aa29.04■■■□□ 2.24
CYBA-202ENST00000561972 FANCD2Q9BXW9 1451 aa29.03■■■□□ 2.24
CYBA-202ENST00000561972 CFTRP13569 1480 aa29.01■■■□□ 2.23
CYBA-202ENST00000561972 URB2Q14146 1524 aaKnown RBP28.8■■■□□ 2.2
CYBA-202ENST00000561972 PRDM2Q13029 1718 aa28.8■■■□□ 2.2
CYBA-202ENST00000561972 CCDC88BA6NC98 1476 aa28.77■■■□□ 2.2
CYBA-202ENST00000561972 SUPT5HO00267 1087 aaKnown RBP28.67■■■□□ 2.18
CYBA-202ENST00000561972 TRIM41Q8WV44 630 aa28.57■■■□□ 2.16
CYBA-202ENST00000561972 OSCARQ8IYS5 282 aa28.5■■■□□ 2.15
CYBA-202ENST00000561972 TOPBP1Q92547 1522 aa28.48■■■□□ 2.15
CYBA-202ENST00000561972 ZNF608Q9ULD9 1512 aaPredicted RBP28.45■■■□□ 2.15
CYBA-202ENST00000561972 IFT140Q96RY7 1462 aa28.45■■■□□ 2.14
CYBA-202ENST00000561972 ABCC8Q09428 1581 aa28.38■■■□□ 2.13
CYBA-202ENST00000561972 DNMBPQ6XZF7 1577 aa28.38■■■□□ 2.13
CYBA-202ENST00000561972 EIF4G3O43432 1585 aaKnown RBP28.29■■■□□ 2.12
CYBA-202ENST00000561972 TARBP1Q13395 1621 aaKnown RBP28.25■■■□□ 2.11
CYBA-202ENST00000561972 AQRO60306 1485 aaKnown RBP eCLIP28.2■■■□□ 2.14e-6■■■■□ 25.7
CYBA-202ENST00000561972 POLA1P09884 1462 aaPredicted RBP28.2■■■□□ 2.1
CYBA-202ENST00000561972 RIMBP3CA6NJZ7 1639 aa28.18■■■□□ 2.1
CYBA-202ENST00000561972 RIMBP3BA6NNM3 1639 aa28.18■■■□□ 2.1
CYBA-202ENST00000561972 RIMBP3Q9UFD9 1639 aa28.18■■■□□ 2.1
CYBA-202ENST00000561972 CHD1O14646 1710 aa28.12■■■□□ 2.09
CYBA-202ENST00000561972 RAD54L2Q9Y4B4 1467 aa28.12■■■□□ 2.09
CYBA-202ENST00000561972 SOGA1O94964 1423 aa28.07■■■□□ 2.08
CYBA-202ENST00000561972 ARHGEF11O15085 1522 aa28.06■■■□□ 2.08
CYBA-202ENST00000561972 FGD5Q6ZNL6 1462 aa28.03■■■□□ 2.08
CYBA-202ENST00000561972 CUX1P39880 1505 aa28.02■■■□□ 2.08
CYBA-202ENST00000561972 TDRD9Q8NDG6 1382 aaKnown RBP28.02■■■□□ 2.08
CYBA-202ENST00000561972 FBLN2P98095 1184 aa28.01■■■□□ 2.07
CYBA-202ENST00000561972 WDR97A6NE52 1622 aa27.9■■■□□ 2.06
CYBA-202ENST00000561972 SNAPC4Q5SXM2 1469 aa27.89■■■□□ 2.06
CYBA-202ENST00000561972 CYB5RLQ6IPT4 315 aa27.87■■■□□ 2.05
CYBA-202ENST00000561972 GRIN2BQ13224 1484 aa27.8■■■□□ 2.04
CYBA-202ENST00000561972 ARAP1Q96P48 1450 aa27.79■■■□□ 2.04
CYBA-202ENST00000561972 MAGI1Q96QZ7 1491 aaPredicted RBP27.79■■■□□ 2.04
CYBA-202ENST00000561972 CHMP7Q8WUX9 453 aaPredicted RBP27.78■■■□□ 2.04
CYBA-202ENST00000561972 PBRM1Q86U86 1689 aa27.76■■■□□ 2.03
CYBA-202ENST00000561972 CLASP1Q7Z460 1538 aa27.74■■■□□ 2.03
CYBA-202ENST00000561972 GAPVD1Q14C86 1478 aa27.72■■■□□ 2.03
CYBA-202ENST00000561972 SYNJ1O43426 1573 aa27.71■■■□□ 2.03
CYBA-202ENST00000561972 SYNJ2O15056 1496 aa27.7■■■□□ 2.03
CYBA-202ENST00000561972 ABCA10Q8WWZ4 1543 aa27.68■■■□□ 2.02
CYBA-202ENST00000561972 ABCA5Q8WWZ7 1642 aa27.67■■■□□ 2.02
CYBA-202ENST00000561972 BIVM-ERCC5R4GMW8 1640 aa27.59■■■□□ 2.01
CYBA-202ENST00000561972 WRNQ14191 1432 aaPredicted RBP eCLIP27.58■■■□□ 2
CYBA-202ENST00000561972 TOP2BQ02880 1626 aa27.56■■■□□ 2
CYBA-202ENST00000561972 TRHP20396 242 aaPredicted RBP27.55■■■□□ 2
CYBA-202ENST00000561972 GRIN2AQ12879 1464 aa27.46■■□□□ 1.99
CYBA-202ENST00000561972 ADAMTS12P58397 1594 aa27.46■■□□□ 1.99
CYBA-202ENST00000561972 CEP170Q5SW79 1584 aa27.39■■□□□ 1.97
CYBA-202ENST00000561972 ERCC6L2Q5T890 1561 aa27.36■■□□□ 1.97
CYBA-202ENST00000561972 FHAD1B1AJZ9 1412 aa27.35■■□□□ 1.97
CYBA-202ENST00000561972 NUP160Q12769 1436 aa27.35■■□□□ 1.97
CYBA-202ENST00000561972 ERICH3Q5RHP9 1530 aa27.34■■□□□ 1.97
CYBA-202ENST00000561972 SHROOM2Q13796 1616 aa27.26■■□□□ 1.95
CYBA-202ENST00000561972 PRG4Q92954 1404 aaPredicted RBP27.1■■□□□ 1.93
CYBA-202ENST00000561972 JPH4Q96JJ6 628 aa27.09■■□□□ 1.93
CYBA-202ENST00000561972 RUSC2Q8N2Y8 1516 aa27.07■■□□□ 1.92
CYBA-202ENST00000561972 IGF1RP08069 1367 aa27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms