RNA–Protein interactions for RNA: ENST00000275300.2

SLC22A3-201, Transcript of solute carrier family 22 member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC22A3, Length 3,348 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC22A3-201ENST00000275300 NISCHQ9Y2I1 1504 aa34.08■■■■□ 3.05
SLC22A3-201ENST00000275300 SHROOM4Q9ULL8 1493 aa30.64■■■□□ 2.5
SLC22A3-201ENST00000275300 SUPT5HO00267 1087 aaKnown RBP30.18■■■□□ 2.42
SLC22A3-201ENST00000275300 DCAF8L2P0C7V8 631 aa29.94■■■□□ 2.38
SLC22A3-201ENST00000275300 CHIC1Q5VXU3 224 aa28.82■■■□□ 2.2
SLC22A3-201ENST00000275300 ZCCHC6Q5VYS8 1495 aaKnown RBP28.72■■■□□ 2.19
SLC22A3-201ENST00000275300 MYO15BQ96JP2 1530 aa28.7■■■□□ 2.19
SLC22A3-201ENST00000275300 PCGF6Q9BYE7 350 aa28.69■■■□□ 2.18
SLC22A3-201ENST00000275300 LOC105371045A0A1W2PR82 267 aa28.54■■■□□ 2.16
SLC22A3-201ENST00000275300 EHMT2Q96KQ7 1210 aa28.41■■■□□ 2.14
SLC22A3-201ENST00000275300 PPARGC1BQ86YN6 1023 aaKnown RBP28.39■■■□□ 2.13
SLC22A3-201ENST00000275300 HRCP23327 699 aa28.26■■■□□ 2.11
SLC22A3-201ENST00000275300 CCDC180Q9P1Z9 1646 aa28.18■■■□□ 2.1
SLC22A3-201ENST00000275300 FAM9AQ8IZU1 332 aaPredicted RBP28.12■■■□□ 2.09
SLC22A3-201ENST00000275300 TRIM41Q8WV44 630 aa27.68■■■□□ 2.02
SLC22A3-201ENST00000275300 SCRIBQ14160 1630 aa27.51■■■□□ 2
SLC22A3-201ENST00000275300 TRIM26Q12899 539 aaPredicted RBP27.48■■□□□ 1.99
SLC22A3-201ENST00000275300 TTBK1Q5TCY1 1321 aaPredicted RBP27.42■■□□□ 1.98
SLC22A3-201ENST00000275300 ABCC9O60706 1549 aa27.34■■□□□ 1.97
SLC22A3-201ENST00000275300 RSF1Q96T23 1441 aaPredicted RBP27.33■■□□□ 1.97
SLC22A3-201ENST00000275300 DCAF1Q9Y4B6 1507 aa27.3■■□□□ 1.96
SLC22A3-201ENST00000275300 RB1CC1Q8TDY2 1594 aa27.1■■□□□ 1.93
SLC22A3-201ENST00000275300 CECR2Q9BXF3 1484 aa27.09■■□□□ 1.93
SLC22A3-201ENST00000275300 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.95■■□□□ 1.9
SLC22A3-201ENST00000275300 MROH2BQ7Z745 1585 aa26.8■■□□□ 1.88
SLC22A3-201ENST00000275300 CCER1Q8TC90 406 aaPredicted RBP26.73■■□□□ 1.87
SLC22A3-201ENST00000275300 RANGAP1P46060 587 aaPredicted RBP26.67■■□□□ 1.86
SLC22A3-201ENST00000275300 ZEB1P37275 1124 aaPredicted RBP26.67■■□□□ 1.86
SLC22A3-201ENST00000275300 PABPN1Q86U42 306 aaKnown RBP eCLIP26.67■■□□□ 1.86
SLC22A3-201ENST00000275300 WIZO95785 1651 aa26.64■■□□□ 1.85
SLC22A3-201ENST00000275300 UBTFP17480 764 aaKnown RBP26.55■■□□□ 1.84
SLC22A3-201ENST00000275300 SCAF1Q9H7N4 1312 aaKnown RBP26.45■■□□□ 1.83
SLC22A3-201ENST00000275300 ABCC8Q09428 1581 aa26.41■■□□□ 1.82
SLC22A3-201ENST00000275300 CCDC88BA6NC98 1476 aa26.32■■□□□ 1.8
SLC22A3-201ENST00000275300 NACADO15069 1562 aa26.32■■□□□ 1.8
SLC22A3-201ENST00000275300 SOGA1O94964 1423 aa26.29■■□□□ 1.8
SLC22A3-201ENST00000275300 HNRNPUL2Q1KMD3 747 aaKnown RBP26.27■■□□□ 1.8
SLC22A3-201ENST00000275300 RUSC2Q8N2Y8 1516 aa26.2■■□□□ 1.78
SLC22A3-201ENST00000275300 YTHDC1Q96MU7 727 aaKnown RBP26.19■■□□□ 1.78
SLC22A3-201ENST00000275300 DIEXFQ68CQ4 756 aaKnown RBP26.16■■□□□ 1.78
SLC22A3-201ENST00000275300 CSRNP3Q8WYN3 585 aa26.15■■□□□ 1.78
SLC22A3-201ENST00000275300 NEUROD1Q13562 356 aa26.14■■□□□ 1.78
SLC22A3-201ENST00000275300 CEP162Q5TB80 1403 aa26.09■■□□□ 1.77
SLC22A3-201ENST00000275300 BAZ1AQ9NRL2 1556 aaPredicted RBP26.05■■□□□ 1.76
SLC22A3-201ENST00000275300 GTF3C3Q9Y5Q9 886 aa25.95■■□□□ 1.75
SLC22A3-201ENST00000275300 ACIN1Q9UKV3 1341 aaKnown RBP25.93■■□□□ 1.74
SLC22A3-201ENST00000275300 TOP2AP11388 1531 aaKnown RBP25.84■■□□□ 1.73
SLC22A3-201ENST00000275300 SMARCA2P51531 1590 aa25.84■■□□□ 1.73
SLC22A3-201ENST00000275300 APLP2Q06481 763 aa25.84■■□□□ 1.73
SLC22A3-201ENST00000275300 SMARCA4P51532 1647 aa25.83■■□□□ 1.73
SLC22A3-201ENST00000275300 TNIKQ9UKE5 1360 aa25.79■■□□□ 1.72
SLC22A3-201ENST00000275300 EIF4G1Q04637 1599 aaKnown RBP25.76■■□□□ 1.72
SLC22A3-201ENST00000275300 ITGAEP38570 1179 aa25.73■■□□□ 1.71
SLC22A3-201ENST00000275300 WRNQ14191 1432 aaPredicted RBP eCLIP25.73■■□□□ 1.71
SLC22A3-201ENST00000275300 ZNF316A6NFI3 1004 aaPredicted RBP25.71■■□□□ 1.71
SLC22A3-201ENST00000275300 CENPBP07199 599 aaPredicted RBP25.71■■□□□ 1.71
SLC22A3-201ENST00000275300 MIER1Q8N108 512 aa25.68■■□□□ 1.7
SLC22A3-201ENST00000275300 GOLGA3Q08378 1498 aa25.6■■□□□ 1.69
SLC22A3-201ENST00000275300 CLIP1P30622 1438 aa25.59■■□□□ 1.69
SLC22A3-201ENST00000275300 UNC13AQ9UPW8 1703 aa25.55■■□□□ 1.68
SLC22A3-201ENST00000275300 RAPGEF2Q9Y4G8 1499 aa25.49■■□□□ 1.67
SLC22A3-201ENST00000275300 PELP1Q8IZL8 1130 aaKnown RBP25.48■■□□□ 1.67
SLC22A3-201ENST00000275300 SYNJ1O43426 1573 aa25.46■■□□□ 1.67
SLC22A3-201ENST00000275300 KANK4Q5T7N3 995 aaPredicted RBP25.45■■□□□ 1.66
SLC22A3-201ENST00000275300 ATP1B4Q9UN42 357 aaPredicted RBP25.43■■□□□ 1.66
SLC22A3-201ENST00000275300 EEA1Q15075 1411 aa25.41■■□□□ 1.66
SLC22A3-201ENST00000275300 BAZ1BQ9UIG0 1483 aaKnown RBP25.38■■□□□ 1.65
SLC22A3-201ENST00000275300 BICRAQ9NZM4 1560 aa25.38■■□□□ 1.65
SLC22A3-201ENST00000275300 CEP164Q9UPV0 1460 aa25.37■■□□□ 1.65
SLC22A3-201ENST00000275300 ATAD2BQ9ULI0 1458 aa25.33■■□□□ 1.65
SLC22A3-201ENST00000275300 P3H3Q8IVL6 736 aa25.31■■□□□ 1.64
SLC22A3-201ENST00000275300 VPS8Q8N3P4 1428 aa25.27■■□□□ 1.64
SLC22A3-201ENST00000275300 KIF21BO75037 1637 aa25.13■■□□□ 1.61
SLC22A3-201ENST00000275300 HIRIP3Q9BW71 556 aaPredicted RBP25.12■■□□□ 1.61
SLC22A3-201ENST00000275300 FAM50AQ14320 339 aaKnown RBP25.08■■□□□ 1.61
SLC22A3-201ENST00000275300 KCNH8Q96L42 1107 aa25.07■■□□□ 1.6
SLC22A3-201ENST00000275300 DHX57Q6P158 1386 aaKnown RBP25.01■■□□□ 1.59
SLC22A3-201ENST00000275300 ARAP1Q96P48 1450 aa24.98■■□□□ 1.59
SLC22A3-201ENST00000275300 SIN3AQ96ST3 1273 aa24.97■■□□□ 1.59
SLC22A3-201ENST00000275300 BCANQ96GW7 911 aa24.94■■□□□ 1.58
SLC22A3-201ENST00000275300 PEG3Q9GZU2 1588 aa24.88■■□□□ 1.57
SLC22A3-201ENST00000275300 DDX10Q13206 875 aaKnown RBP24.86■■□□□ 1.57
SLC22A3-201ENST00000275300 KIF27Q86VH2 1401 aa24.86■■□□□ 1.57
SLC22A3-201ENST00000275300 CUX1P39880 1505 aa24.83■■□□□ 1.57
SLC22A3-201ENST00000275300 TOP2BQ02880 1626 aa24.82■■□□□ 1.56
SLC22A3-201ENST00000275300 PRXQ9BXM0 1461 aa24.81■■□□□ 1.56
SLC22A3-201ENST00000275300 CCNB3Q8WWL7 1395 aa24.81■■□□□ 1.56
SLC22A3-201ENST00000275300 CUX2O14529 1486 aa24.79■■□□□ 1.56
SLC22A3-201ENST00000275300 ARID3CA6NKF2 412 aa24.77■■□□□ 1.56
SLC22A3-201ENST00000275300 RAB3GAP2Q9H2M9 1393 aa24.74■■□□□ 1.55
SLC22A3-201ENST00000275300 ARHGAP35Q9NRY4 1499 aa24.73■■□□□ 1.55
SLC22A3-201ENST00000275300 SUPT16HQ9Y5B9 1047 aaKnown RBP24.72■■□□□ 1.55
SLC22A3-201ENST00000275300 IGF1RP08069 1367 aa24.68■■□□□ 1.54
SLC22A3-201ENST00000275300 TRIM52Q96A61 297 aa24.66■■□□□ 1.54
SLC22A3-201ENST00000275300 CARMIL1Q5VZK9 1371 aa24.66■■□□□ 1.54
SLC22A3-201ENST00000275300 PHLDB1Q86UU1 1377 aa24.61■■□□□ 1.53
SLC22A3-201ENST00000275300 NCAPD3P42695 1498 aa24.58■■□□□ 1.53
SLC22A3-201ENST00000275300 CNGB1Q14028 1251 aaPredicted RBP24.57■■□□□ 1.52
SLC22A3-201ENST00000275300 RRBP1Q9P2E9 1410 aaKnown RBP24.56■■□□□ 1.52
SLC22A3-201ENST00000275300 FHOD3Q2V2M9 1422 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms