RNA–Protein interactions for RNA: ENST00000536003.5

PAAF1-207, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,639 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-207ENST00000536003 NISCHQ9Y2I1 1504 aa38.38■■■■□ 3.73
PAAF1-207ENST00000536003 CCDC180Q9P1Z9 1646 aa34.38■■■■□ 3.09
PAAF1-207ENST00000536003 ABCC9O60706 1549 aa34.07■■■■□ 3.04
PAAF1-207ENST00000536003 RB1CC1Q8TDY2 1594 aa32.53■■■□□ 2.8
PAAF1-207ENST00000536003 NACADO15069 1562 aa32.36■■■□□ 2.77
PAAF1-207ENST00000536003 DCAF8L2P0C7V8 631 aa32.14■■■□□ 2.74
PAAF1-207ENST00000536003 MYO15BQ96JP2 1530 aa31.99■■■□□ 2.71
PAAF1-207ENST00000536003 UNC13AQ9UPW8 1703 aa31.97■■■□□ 2.71
PAAF1-207ENST00000536003 ZCCHC6Q5VYS8 1495 aaKnown RBP31.9■■■□□ 2.7
PAAF1-207ENST00000536003 PABPN1Q86U42 306 aaKnown RBP eCLIP31.7■■■□□ 2.66
PAAF1-207ENST00000536003 DCAF1Q9Y4B6 1507 aa31.69■■■□□ 2.66
PAAF1-207ENST00000536003 DNAJC5BQ9UF47 199 aa31.68■■■□□ 2.66
PAAF1-207ENST00000536003 BICRAQ9NZM4 1560 aa31.66■■■□□ 2.66
PAAF1-207ENST00000536003 SCRIBQ14160 1630 aa31.38■■■□□ 2.61
PAAF1-207ENST00000536003 SHROOM4Q9ULL8 1493 aa31.14■■■□□ 2.58
PAAF1-207ENST00000536003 CC2D2AQ9P2K1 1620 aa30.83■■■□□ 2.53
PAAF1-207ENST00000536003 EIF4G1Q04637 1599 aaKnown RBP30.82■■■□□ 2.53
PAAF1-207ENST00000536003 CECR2Q9BXF3 1484 aa30.64■■■□□ 2.49
PAAF1-207ENST00000536003 SMARCA4P51532 1647 aa29.94■■■□□ 2.38
PAAF1-207ENST00000536003 NCAPD3P42695 1498 aa29.84■■■□□ 2.37
PAAF1-207ENST00000536003 ATAD2BQ9ULI0 1458 aa29.83■■■□□ 2.37
PAAF1-207ENST00000536003 BAZ1AQ9NRL2 1556 aaPredicted RBP29.77■■■□□ 2.36
PAAF1-207ENST00000536003 SMARCA2P51531 1590 aa29.74■■■□□ 2.35
PAAF1-207ENST00000536003 HMGXB3Q12766 1538 aa29.72■■■□□ 2.35
PAAF1-207ENST00000536003 PEG3Q9GZU2 1588 aa29.62■■■□□ 2.33
PAAF1-207ENST00000536003 MROH2BQ7Z745 1585 aa29.61■■■□□ 2.33
PAAF1-207ENST00000536003 BAZ1BQ9UIG0 1483 aaKnown RBP29.56■■■□□ 2.32
PAAF1-207ENST00000536003 NESP48681 1621 aa29.39■■■□□ 2.3
PAAF1-207ENST00000536003 ERCC6Q03468 1493 aa29.35■■■□□ 2.29
PAAF1-207ENST00000536003 WIZO95785 1651 aa29.31■■■□□ 2.28
PAAF1-207ENST00000536003 CUX2O14529 1486 aa29.2■■■□□ 2.26
PAAF1-207ENST00000536003 LAMC3Q9Y6N6 1575 aa29.17■■■□□ 2.26
PAAF1-207ENST00000536003 KIF21AQ7Z4S6 1674 aa29.09■■■□□ 2.25
PAAF1-207ENST00000536003 THOC2Q8NI27 1593 aaKnown RBP29.08■■■□□ 2.25
PAAF1-207ENST00000536003 RSF1Q96T23 1441 aaPredicted RBP29.04■■■□□ 2.24
PAAF1-207ENST00000536003 CADPSQ9ULU8 1353 aa28.93■■■□□ 2.22
PAAF1-207ENST00000536003 TOP2AP11388 1531 aaKnown RBP28.91■■■□□ 2.22
PAAF1-207ENST00000536003 PDS5BQ9NTI5 1447 aa28.91■■■□□ 2.22
PAAF1-207ENST00000536003 DNAJC5Q9H3Z4 198 aa28.8■■■□□ 2.2
PAAF1-207ENST00000536003 MRC2Q9UBG0 1479 aa28.72■■■□□ 2.19
PAAF1-207ENST00000536003 CFTRP13569 1480 aa28.7■■■□□ 2.19
PAAF1-207ENST00000536003 WDR62O43379 1518 aa28.69■■■□□ 2.18
PAAF1-207ENST00000536003 FANCD2Q9BXW9 1451 aa28.66■■■□□ 2.18
PAAF1-207ENST00000536003 CEP164Q9UPV0 1460 aa28.66■■■□□ 2.18
PAAF1-207ENST00000536003 PRDM2Q13029 1718 aa28.58■■■□□ 2.17
PAAF1-207ENST00000536003 CCDC88BA6NC98 1476 aa28.55■■■□□ 2.16
PAAF1-207ENST00000536003 URB2Q14146 1524 aaKnown RBP28.45■■■□□ 2.14
PAAF1-207ENST00000536003 TOPBP1Q92547 1522 aa28.16■■■□□ 2.1
PAAF1-207ENST00000536003 DNMBPQ6XZF7 1577 aa28.1■■■□□ 2.09
PAAF1-207ENST00000536003 ZNF608Q9ULD9 1512 aaPredicted RBP28.06■■■□□ 2.08
PAAF1-207ENST00000536003 IFT140Q96RY7 1462 aa28.04■■■□□ 2.08
PAAF1-207ENST00000536003 ABCC8Q09428 1581 aa28.01■■■□□ 2.07
PAAF1-207ENST00000536003 EIF4G3O43432 1585 aaKnown RBP27.97■■■□□ 2.07
PAAF1-207ENST00000536003 TARBP1Q13395 1621 aaKnown RBP27.94■■■□□ 2.06
PAAF1-207ENST00000536003 POLA1P09884 1462 aaPredicted RBP27.9■■■□□ 2.06
PAAF1-207ENST00000536003 SUPT5HO00267 1087 aaKnown RBP27.89■■■□□ 2.05
PAAF1-207ENST00000536003 CUX1P39880 1505 aa27.81■■■□□ 2.04
PAAF1-207ENST00000536003 OSCARQ8IYS5 282 aa27.81■■■□□ 2.04
PAAF1-207ENST00000536003 RAD54L2Q9Y4B4 1467 aa27.79■■■□□ 2.04
PAAF1-207ENST00000536003 AQRO60306 1485 aaKnown RBP eCLIP27.79■■■□□ 2.041e-6■■■■□ 21.4
PAAF1-207ENST00000536003 FGD5Q6ZNL6 1462 aa27.77■■■□□ 2.04
PAAF1-207ENST00000536003 CHD1O14646 1710 aa27.73■■■□□ 2.03
PAAF1-207ENST00000536003 SOGA1O94964 1423 aa27.69■■■□□ 2.02
PAAF1-207ENST00000536003 TRIM41Q8WV44 630 aa27.68■■■□□ 2.02
PAAF1-207ENST00000536003 WDR97A6NE52 1622 aa27.66■■■□□ 2.02
PAAF1-207ENST00000536003 TDRD9Q8NDG6 1382 aaKnown RBP27.63■■■□□ 2.01
PAAF1-207ENST00000536003 RIMBP3CA6NJZ7 1639 aa27.62■■■□□ 2.01
PAAF1-207ENST00000536003 RIMBP3BA6NNM3 1639 aa27.62■■■□□ 2.01
PAAF1-207ENST00000536003 RIMBP3Q9UFD9 1639 aa27.62■■■□□ 2.01
PAAF1-207ENST00000536003 SNAPC4Q5SXM2 1469 aa27.54■■■□□ 2
PAAF1-207ENST00000536003 ARHGEF11O15085 1522 aa27.53■■■□□ 2
PAAF1-207ENST00000536003 PBRM1Q86U86 1689 aa27.5■■□□□ 1.99
PAAF1-207ENST00000536003 ABCA5Q8WWZ7 1642 aa27.46■■□□□ 1.99
PAAF1-207ENST00000536003 BIVM-ERCC5R4GMW8 1640 aa27.46■■□□□ 1.99
PAAF1-207ENST00000536003 FBLN2P98095 1184 aa27.46■■□□□ 1.99
PAAF1-207ENST00000536003 SYNJ1O43426 1573 aa27.46■■□□□ 1.99
PAAF1-207ENST00000536003 GRIN2BQ13224 1484 aa27.45■■□□□ 1.98
PAAF1-207ENST00000536003 ABCA10Q8WWZ4 1543 aa27.45■■□□□ 1.98
PAAF1-207ENST00000536003 MAGI1Q96QZ7 1491 aaPredicted RBP27.44■■□□□ 1.98
PAAF1-207ENST00000536003 TOP2BQ02880 1626 aa27.43■■□□□ 1.98
PAAF1-207ENST00000536003 GAPVD1Q14C86 1478 aa27.4■■□□□ 1.98
PAAF1-207ENST00000536003 WRNQ14191 1432 aaPredicted RBP eCLIP27.38■■□□□ 1.97
PAAF1-207ENST00000536003 CLASP1Q7Z460 1538 aa27.36■■□□□ 1.97
PAAF1-207ENST00000536003 SYNJ2O15056 1496 aa27.35■■□□□ 1.97
PAAF1-207ENST00000536003 ARAP1Q96P48 1450 aa27.29■■□□□ 1.96
PAAF1-207ENST00000536003 CHMP7Q8WUX9 453 aaPredicted RBP27.27■■□□□ 1.96
PAAF1-207ENST00000536003 ADAMTS12P58397 1594 aa27.23■■□□□ 1.95
PAAF1-207ENST00000536003 CYB5RLQ6IPT4 315 aa27.18■■□□□ 1.94
PAAF1-207ENST00000536003 GRIN2AQ12879 1464 aa27.14■■□□□ 1.93
PAAF1-207ENST00000536003 ERICH3Q5RHP9 1530 aa27.1■■□□□ 1.93
PAAF1-207ENST00000536003 CEP170Q5SW79 1584 aa27.1■■□□□ 1.93
PAAF1-207ENST00000536003 FHAD1B1AJZ9 1412 aa27.04■■□□□ 1.92
PAAF1-207ENST00000536003 NUP160Q12769 1436 aa27.03■■□□□ 1.92
PAAF1-207ENST00000536003 ERCC6L2Q5T890 1561 aa27■■□□□ 1.91
PAAF1-207ENST00000536003 SHROOM2Q13796 1616 aa26.95■■□□□ 1.9
PAAF1-207ENST00000536003 RUSC2Q8N2Y8 1516 aa26.86■■□□□ 1.89
PAAF1-207ENST00000536003 CUL7Q14999 1698 aa26.8■■□□□ 1.88
PAAF1-207ENST00000536003 KIF27Q86VH2 1401 aa26.8■■□□□ 1.88
PAAF1-207ENST00000536003 TRHP20396 242 aaPredicted RBP26.76■■□□□ 1.87
PAAF1-207ENST00000536003 IGF1RP08069 1367 aa26.76■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms