RNA–Protein interactions for RNA: ENST00000542293.5

PAAF1-211, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-211ENST00000542293 NISCHQ9Y2I1 1504 aa40.78■■■■■ 4.12
PAAF1-211ENST00000542293 ABCC9O60706 1549 aa38.01■■■■□ 3.67
PAAF1-211ENST00000542293 CCDC180Q9P1Z9 1646 aa37.03■■■■□ 3.52
PAAF1-211ENST00000542293 DNAJC5BQ9UF47 199 aa36.6■■■■□ 3.45
PAAF1-211ENST00000542293 RB1CC1Q8TDY2 1594 aa35.7■■■■□ 3.31
PAAF1-211ENST00000542293 PABPN1Q86U42 306 aaKnown RBP eCLIP35.23■■■■□ 3.23
PAAF1-211ENST00000542293 NACADO15069 1562 aa35.21■■■■□ 3.23
PAAF1-211ENST00000542293 UNC13AQ9UPW8 1703 aa35■■■■□ 3.19
PAAF1-211ENST00000542293 DCAF8L2P0C7V8 631 aa34.81■■■■□ 3.16
PAAF1-211ENST00000542293 BICRAQ9NZM4 1560 aa34.79■■■■□ 3.16
PAAF1-211ENST00000542293 MYO15BQ96JP2 1530 aa34.4■■■■□ 3.1
PAAF1-211ENST00000542293 CECR2Q9BXF3 1484 aa34.33■■■■□ 3.09
PAAF1-211ENST00000542293 CC2D2AQ9P2K1 1620 aa34.3■■■■□ 3.08
PAAF1-211ENST00000542293 DNAJC5Q9H3Z4 198 aa34.26■■■■□ 3.08
PAAF1-211ENST00000542293 SHROOM4Q9ULL8 1493 aa34.1■■■■□ 3.05
PAAF1-211ENST00000542293 EIF4G1Q04637 1599 aaKnown RBP33.97■■■■□ 3.03
PAAF1-211ENST00000542293 SCRIBQ14160 1630 aa33.7■■■□□ 2.99
PAAF1-211ENST00000542293 DCAF1Q9Y4B6 1507 aa33.6■■■□□ 2.97
PAAF1-211ENST00000542293 ZCCHC6Q5VYS8 1495 aaKnown RBP33.59■■■□□ 2.97
PAAF1-211ENST00000542293 CUX2O14529 1486 aa33.12■■■□□ 2.89
PAAF1-211ENST00000542293 ERCC6Q03468 1493 aa32.83■■■□□ 2.85
PAAF1-211ENST00000542293 NCAPD3P42695 1498 aa32.54■■■□□ 2.8
PAAF1-211ENST00000542293 NESP48681 1621 aa32.4■■■□□ 2.78
PAAF1-211ENST00000542293 TRIM41Q8WV44 630 aa32.34■■■□□ 2.77
PAAF1-211ENST00000542293 ATAD2BQ9ULI0 1458 aa32.32■■■□□ 2.76
PAAF1-211ENST00000542293 THOC2Q8NI27 1593 aaKnown RBP32.27■■■□□ 2.76
PAAF1-211ENST00000542293 HMGXB3Q12766 1538 aa32.21■■■□□ 2.75
PAAF1-211ENST00000542293 SMARCA2P51531 1590 aa32.13■■■□□ 2.73
PAAF1-211ENST00000542293 SMARCA4P51532 1647 aa32.04■■■□□ 2.72
PAAF1-211ENST00000542293 KIF21AQ7Z4S6 1674 aa31.95■■■□□ 2.71
PAAF1-211ENST00000542293 LAMC3Q9Y6N6 1575 aa31.95■■■□□ 2.71
PAAF1-211ENST00000542293 BAZ1BQ9UIG0 1483 aaKnown RBP31.92■■■□□ 2.7
PAAF1-211ENST00000542293 PDS5BQ9NTI5 1447 aa31.77■■■□□ 2.68
PAAF1-211ENST00000542293 PEG3Q9GZU2 1588 aa31.73■■■□□ 2.67
PAAF1-211ENST00000542293 BAZ1AQ9NRL2 1556 aaPredicted RBP31.69■■■□□ 2.66
PAAF1-211ENST00000542293 MRC2Q9UBG0 1479 aa31.59■■■□□ 2.65
PAAF1-211ENST00000542293 WDR62O43379 1518 aa31.57■■■□□ 2.64
PAAF1-211ENST00000542293 CADPSQ9ULU8 1353 aa31.49■■■□□ 2.63
PAAF1-211ENST00000542293 MROH2BQ7Z745 1585 aa31.45■■■□□ 2.63
PAAF1-211ENST00000542293 OSCARQ8IYS5 282 aa31.43■■■□□ 2.62
PAAF1-211ENST00000542293 CEP164Q9UPV0 1460 aa31.26■■■□□ 2.59
PAAF1-211ENST00000542293 RIMBP3CA6NJZ7 1639 aa31.2■■■□□ 2.59
PAAF1-211ENST00000542293 RIMBP3BA6NNM3 1639 aa31.2■■■□□ 2.59
PAAF1-211ENST00000542293 RIMBP3Q9UFD9 1639 aa31.2■■■□□ 2.59
PAAF1-211ENST00000542293 FANCD2Q9BXW9 1451 aa31.15■■■□□ 2.58
PAAF1-211ENST00000542293 WIZO95785 1651 aa31.03■■■□□ 2.56
PAAF1-211ENST00000542293 URB2Q14146 1524 aaKnown RBP30.99■■■□□ 2.55
PAAF1-211ENST00000542293 ARHGEF11O15085 1522 aa30.98■■■□□ 2.55
PAAF1-211ENST00000542293 CFTRP13569 1480 aa30.94■■■□□ 2.54
PAAF1-211ENST00000542293 AEBP2Q6ZN18 517 aaPredicted RBP30.84■■■□□ 2.53
PAAF1-211ENST00000542293 CYB5RLQ6IPT4 315 aa30.79■■■□□ 2.52
PAAF1-211ENST00000542293 ZNF608Q9ULD9 1512 aaPredicted RBP30.78■■■□□ 2.52
PAAF1-211ENST00000542293 TRHP20396 242 aaPredicted RBP30.74■■■□□ 2.51
PAAF1-211ENST00000542293 IFT140Q96RY7 1462 aa30.67■■■□□ 2.5
PAAF1-211ENST00000542293 ARAP1Q96P48 1450 aa30.63■■■□□ 2.49
PAAF1-211ENST00000542293 PRDM2Q13029 1718 aa30.57■■■□□ 2.48
PAAF1-211ENST00000542293 EIF4G3O43432 1585 aaKnown RBP30.54■■■□□ 2.48
PAAF1-211ENST00000542293 CHD1O14646 1710 aa30.53■■■□□ 2.48
PAAF1-211ENST00000542293 TOP2AP11388 1531 aaKnown RBP30.52■■■□□ 2.48
PAAF1-211ENST00000542293 TOPBP1Q92547 1522 aa30.47■■■□□ 2.47
PAAF1-211ENST00000542293 RSF1Q96T23 1441 aaPredicted RBP30.41■■■□□ 2.46
PAAF1-211ENST00000542293 AQRO60306 1485 aaKnown RBP eCLIP30.36■■■□□ 2.451e-6■■■■□ 21.4
PAAF1-211ENST00000542293 FBLN2P98095 1184 aa30.3■■■□□ 2.44
PAAF1-211ENST00000542293 TARBP1Q13395 1621 aaKnown RBP30.29■■■□□ 2.44
PAAF1-211ENST00000542293 ABCC8Q09428 1581 aa30.26■■■□□ 2.43
PAAF1-211ENST00000542293 DNMBPQ6XZF7 1577 aa30.25■■■□□ 2.43
PAAF1-211ENST00000542293 CCDC88BA6NC98 1476 aa30.21■■■□□ 2.43
PAAF1-211ENST00000542293 CLASP1Q7Z460 1538 aa30.13■■■□□ 2.41
PAAF1-211ENST00000542293 POLA1P09884 1462 aaPredicted RBP30.09■■■□□ 2.41
PAAF1-211ENST00000542293 RAD54L2Q9Y4B4 1467 aa30.02■■■□□ 2.4
PAAF1-211ENST00000542293 SNAPC4Q5SXM2 1469 aa30■■■□□ 2.39
PAAF1-211ENST00000542293 TDRD9Q8NDG6 1382 aaKnown RBP30■■■□□ 2.39
PAAF1-211ENST00000542293 SYNJ1O43426 1573 aa29.98■■■□□ 2.39
PAAF1-211ENST00000542293 CHMP7Q8WUX9 453 aaPredicted RBP29.91■■■□□ 2.38
PAAF1-211ENST00000542293 SOGA1O94964 1423 aa29.9■■■□□ 2.38
PAAF1-211ENST00000542293 GAPVD1Q14C86 1478 aa29.87■■■□□ 2.37
PAAF1-211ENST00000542293 MAGI1Q96QZ7 1491 aaPredicted RBP29.86■■■□□ 2.37
PAAF1-211ENST00000542293 WDR97A6NE52 1622 aa29.84■■■□□ 2.37
PAAF1-211ENST00000542293 SYNJ2O15056 1496 aa29.78■■■□□ 2.36
PAAF1-211ENST00000542293 FGD5Q6ZNL6 1462 aa29.76■■■□□ 2.35
PAAF1-211ENST00000542293 GRIN2BQ13224 1484 aa29.75■■■□□ 2.35
PAAF1-211ENST00000542293 CHIC1Q5VXU3 224 aa29.66■■■□□ 2.34
PAAF1-211ENST00000542293 ERCC6L2Q5T890 1561 aa29.64■■■□□ 2.33
PAAF1-211ENST00000542293 PBRM1Q86U86 1689 aa29.62■■■□□ 2.33
PAAF1-211ENST00000542293 CUX1P39880 1505 aa29.61■■■□□ 2.33
PAAF1-211ENST00000542293 KIF13AQ9H1H9 1805 aa29.55■■■□□ 2.32
PAAF1-211ENST00000542293 CEP170Q5SW79 1584 aa29.45■■■□□ 2.31
PAAF1-211ENST00000542293 ABCA5Q8WWZ7 1642 aa29.42■■■□□ 2.3
PAAF1-211ENST00000542293 ILDR1Q86SU0 546 aaPredicted RBP29.42■■■□□ 2.3
PAAF1-211ENST00000542293 GRIN2AQ12879 1464 aa29.39■■■□□ 2.3
PAAF1-211ENST00000542293 ABCA10Q8WWZ4 1543 aa29.35■■■□□ 2.29
PAAF1-211ENST00000542293 NUP160Q12769 1436 aa29.35■■■□□ 2.29
PAAF1-211ENST00000542293 SHROOM2Q13796 1616 aa29.34■■■□□ 2.29
PAAF1-211ENST00000542293 KDM4FA0A1W2PPD8 638 aa29.3■■■□□ 2.28
PAAF1-211ENST00000542293 ADAMTS12P58397 1594 aa29.27■■■□□ 2.28
PAAF1-211ENST00000542293 FAM69CQ0P6D2 419 aa29.2■■■□□ 2.26
PAAF1-211ENST00000542293 ABCC10Q5T3U5 1492 aa29.2■■■□□ 2.26
PAAF1-211ENST00000542293 PRG4Q92954 1404 aaPredicted RBP29.12■■■□□ 2.25
PAAF1-211ENST00000542293 DIP2BQ9P265 1576 aa29.12■■■□□ 2.25
PAAF1-211ENST00000542293 FHAD1B1AJZ9 1412 aa29.11■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms