RNA–Protein interactions for RNA: ENST00000550329.1

SLC11A2-221, Transcript of solute carrier family 11 member 2, humanhuman

TSL 2

Gene SLC11A2, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC11A2-221ENST00000550329 NISCHQ9Y2I1 1504 aa48.71■■■■■ 5.39
SLC11A2-221ENST00000550329 ABCC9O60706 1549 aa44.88■■■■■ 4.78
SLC11A2-221ENST00000550329 CCDC180Q9P1Z9 1646 aa44.06■■■■■ 4.64
SLC11A2-221ENST00000550329 DNAJC5BQ9UF47 199 aa42.92■■■■■ 4.46
SLC11A2-221ENST00000550329 RB1CC1Q8TDY2 1594 aa42.34■■■■■ 4.37
SLC11A2-221ENST00000550329 NACADO15069 1562 aa41.86■■■■■ 4.29
SLC11A2-221ENST00000550329 PABPN1Q86U42 306 aaKnown RBP eCLIP41.64■■■■■ 4.26
SLC11A2-221ENST00000550329 UNC13AQ9UPW8 1703 aa41.41■■■■■ 4.22
SLC11A2-221ENST00000550329 DCAF8L2P0C7V8 631 aa41.36■■■■■ 4.21
SLC11A2-221ENST00000550329 BICRAQ9NZM4 1560 aa41.2■■■■■ 4.19
SLC11A2-221ENST00000550329 MYO15BQ96JP2 1530 aa41.04■■■■■ 4.16
SLC11A2-221ENST00000550329 ZCCHC6Q5VYS8 1495 aaKnown RBP40.56■■■■■ 4.08
SLC11A2-221ENST00000550329 SHROOM4Q9ULL8 1493 aa40.54■■■■■ 4.08
SLC11A2-221ENST00000550329 CECR2Q9BXF3 1484 aa40.53■■■■■ 4.08
SLC11A2-221ENST00000550329 CC2D2AQ9P2K1 1620 aa40.52■■■■■ 4.08
SLC11A2-221ENST00000550329 DCAF1Q9Y4B6 1507 aa40.26■■■■■ 4.04
SLC11A2-221ENST00000550329 EIF4G1Q04637 1599 aaKnown RBP40.23■■■■■ 4.03
SLC11A2-221ENST00000550329 SCRIBQ14160 1630 aa40.08■■■■■ 4.01
SLC11A2-221ENST00000550329 DNAJC5Q9H3Z4 198 aa40■■■■□ 3.99
SLC11A2-221ENST00000550329 CUX2O14529 1486 aa39.05■■■■□ 3.84
SLC11A2-221ENST00000550329 ERCC6Q03468 1493 aa38.78■■■■□ 3.8
SLC11A2-221ENST00000550329 NCAPD3P42695 1498 aa38.68■■■■□ 3.78
SLC11A2-221ENST00000550329 ATAD2BQ9ULI0 1458 aa38.44■■■■□ 3.74
SLC11A2-221ENST00000550329 NESP48681 1621 aa38.34■■■■□ 3.73
SLC11A2-221ENST00000550329 HMGXB3Q12766 1538 aa38.31■■■■□ 3.72
SLC11A2-221ENST00000550329 SMARCA2P51531 1590 aa38.25■■■■□ 3.71
SLC11A2-221ENST00000550329 SMARCA4P51532 1647 aa38.17■■■■□ 3.7
SLC11A2-221ENST00000550329 THOC2Q8NI27 1593 aaKnown RBP38.14■■■■□ 3.7
SLC11A2-221ENST00000550329 BAZ1BQ9UIG0 1483 aaKnown RBP37.98■■■■□ 3.67
SLC11A2-221ENST00000550329 LAMC3Q9Y6N6 1575 aa37.91■■■■□ 3.66
SLC11A2-221ENST00000550329 BAZ1AQ9NRL2 1556 aaPredicted RBP37.85■■■■□ 3.65
SLC11A2-221ENST00000550329 PEG3Q9GZU2 1588 aa37.84■■■■□ 3.65
SLC11A2-221ENST00000550329 TRIM41Q8WV44 630 aa37.82■■■■□ 3.64
SLC11A2-221ENST00000550329 KIF21AQ7Z4S6 1674 aa37.79■■■■□ 3.64
SLC11A2-221ENST00000550329 PDS5BQ9NTI5 1447 aa37.71■■■■□ 3.63
SLC11A2-221ENST00000550329 MROH2BQ7Z745 1585 aa37.54■■■■□ 3.6
SLC11A2-221ENST00000550329 MRC2Q9UBG0 1479 aa37.45■■■■□ 3.59
SLC11A2-221ENST00000550329 CADPSQ9ULU8 1353 aa37.44■■■■□ 3.58
SLC11A2-221ENST00000550329 WDR62O43379 1518 aa37.41■■■■□ 3.58
SLC11A2-221ENST00000550329 WIZO95785 1651 aa37.16■■■■□ 3.54
SLC11A2-221ENST00000550329 CEP164Q9UPV0 1460 aa37.12■■■■□ 3.53
SLC11A2-221ENST00000550329 OSCARQ8IYS5 282 aa37.09■■■■□ 3.53
SLC11A2-221ENST00000550329 RSF1Q96T23 1441 aaPredicted RBP37.09■■■■□ 3.53
SLC11A2-221ENST00000550329 FANCD2Q9BXW9 1451 aa37.01■■■■□ 3.52
SLC11A2-221ENST00000550329 CFTRP13569 1480 aa36.86■■■■□ 3.49
SLC11A2-221ENST00000550329 URB2Q14146 1524 aaKnown RBP36.8■■■■□ 3.48
SLC11A2-221ENST00000550329 RIMBP3CA6NJZ7 1639 aa36.74■■■■□ 3.47
SLC11A2-221ENST00000550329 RIMBP3BA6NNM3 1639 aa36.74■■■■□ 3.47
SLC11A2-221ENST00000550329 RIMBP3Q9UFD9 1639 aa36.74■■■■□ 3.47
SLC11A2-221ENST00000550329 TOP2AP11388 1531 aaKnown RBP36.73■■■■□ 3.47
SLC11A2-221ENST00000550329 ARHGEF11O15085 1522 aa36.54■■■■□ 3.44
SLC11A2-221ENST00000550329 ZNF608Q9ULD9 1512 aaPredicted RBP36.48■■■■□ 3.43
SLC11A2-221ENST00000550329 IFT140Q96RY7 1462 aa36.43■■■■□ 3.42
SLC11A2-221ENST00000550329 PRDM2Q13029 1718 aa36.38■■■■□ 3.41
SLC11A2-221ENST00000550329 CCDC88BA6NC98 1476 aa36.29■■■■□ 3.4
SLC11A2-221ENST00000550329 CYB5RLQ6IPT4 315 aa36.27■■■■□ 3.4
SLC11A2-221ENST00000550329 TOPBP1Q92547 1522 aa36.23■■■■□ 3.39
SLC11A2-221ENST00000550329 EIF4G3O43432 1585 aaKnown RBP36.21■■■■□ 3.39
SLC11A2-221ENST00000550329 ARAP1Q96P48 1450 aa36.13■■■■□ 3.37
SLC11A2-221ENST00000550329 SUPT5HO00267 1087 aaKnown RBP36.13■■■■□ 3.37
SLC11A2-221ENST00000550329 CHD1O14646 1710 aa36.09■■■■□ 3.37
SLC11A2-221ENST00000550329 TRHP20396 242 aaPredicted RBP36.09■■■■□ 3.37
SLC11A2-221ENST00000550329 ABCC8Q09428 1581 aa36.06■■■■□ 3.36
SLC11A2-221ENST00000550329 AQRO60306 1485 aaKnown RBP eCLIP36.02■■■■□ 3.369e-8■■□□□ 11.7
SLC11A2-221ENST00000550329 DNMBPQ6XZF7 1577 aa36.02■■■■□ 3.36
SLC11A2-221ENST00000550329 TARBP1Q13395 1621 aaKnown RBP36■■■■□ 3.35
SLC11A2-221ENST00000550329 FBLN2P98095 1184 aa35.88■■■■□ 3.33
SLC11A2-221ENST00000550329 POLA1P09884 1462 aaPredicted RBP35.81■■■■□ 3.32
SLC11A2-221ENST00000550329 CLASP1Q7Z460 1538 aa35.7■■■■□ 3.31
SLC11A2-221ENST00000550329 RAD54L2Q9Y4B4 1467 aa35.68■■■■□ 3.3
SLC11A2-221ENST00000550329 TDRD9Q8NDG6 1382 aaKnown RBP35.65■■■■□ 3.3
SLC11A2-221ENST00000550329 AEBP2Q6ZN18 517 aaPredicted RBP35.65■■■■□ 3.3
SLC11A2-221ENST00000550329 SNAPC4Q5SXM2 1469 aa35.62■■■■□ 3.29
SLC11A2-221ENST00000550329 SOGA1O94964 1423 aa35.6■■■■□ 3.29
SLC11A2-221ENST00000550329 SYNJ1O43426 1573 aa35.55■■■■□ 3.28
SLC11A2-221ENST00000550329 WDR97A6NE52 1622 aa35.54■■■■□ 3.28
SLC11A2-221ENST00000550329 MAGI1Q96QZ7 1491 aaPredicted RBP35.49■■■■□ 3.27
SLC11A2-221ENST00000550329 CHMP7Q8WUX9 453 aaPredicted RBP35.49■■■■□ 3.27
SLC11A2-221ENST00000550329 FGD5Q6ZNL6 1462 aa35.45■■■■□ 3.27
SLC11A2-221ENST00000550329 GRIN2BQ13224 1484 aa35.41■■■■□ 3.26
SLC11A2-221ENST00000550329 SYNJ2O15056 1496 aa35.39■■■■□ 3.26
SLC11A2-221ENST00000550329 GAPVD1Q14C86 1478 aa35.35■■■■□ 3.25
SLC11A2-221ENST00000550329 CUX1P39880 1505 aa35.31■■■■□ 3.24
SLC11A2-221ENST00000550329 PBRM1Q86U86 1689 aa35.19■■■■□ 3.22
SLC11A2-221ENST00000550329 ERCC6L2Q5T890 1561 aa35.08■■■■□ 3.21
SLC11A2-221ENST00000550329 ABCA5Q8WWZ7 1642 aa35.05■■■■□ 3.2
SLC11A2-221ENST00000550329 ABCA10Q8WWZ4 1543 aa35.01■■■■□ 3.2
SLC11A2-221ENST00000550329 WRNQ14191 1432 aaPredicted RBP eCLIP34.95■■■■□ 3.19
SLC11A2-221ENST00000550329 GRIN2AQ12879 1464 aa34.95■■■■□ 3.19
SLC11A2-221ENST00000550329 BIVM-ERCC5R4GMW8 1640 aa34.94■■■■□ 3.18
SLC11A2-221ENST00000550329 CEP170Q5SW79 1584 aa34.93■■■■□ 3.18
SLC11A2-221ENST00000550329 TOP2BQ02880 1626 aa34.91■■■■□ 3.18
SLC11A2-221ENST00000550329 NUP160Q12769 1436 aa34.89■■■■□ 3.18
SLC11A2-221ENST00000550329 SHROOM2Q13796 1616 aa34.84■■■■□ 3.17
SLC11A2-221ENST00000550329 ADAMTS12P58397 1594 aa34.83■■■■□ 3.17
SLC11A2-221ENST00000550329 KIF13AQ9H1H9 1805 aa34.83■■■■□ 3.17
SLC11A2-221ENST00000550329 FHAD1B1AJZ9 1412 aa34.69■■■■□ 3.14
SLC11A2-221ENST00000550329 PRG4Q92954 1404 aaPredicted RBP34.59■■■■□ 3.13
SLC11A2-221ENST00000550329 ERICH3Q5RHP9 1530 aa34.55■■■■□ 3.12
SLC11A2-221ENST00000550329 ABCC10Q5T3U5 1492 aa34.54■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms